| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298905
Identifier: 146298905
GI number: 146298905
Start: 1292503
End: 1293318
Strand: Direct
Name: 146298905
Synonym: Fjoh_1144
Alternate gene names: NA
Gene position: 1292503-1293318 (Clockwise)
Preceding gene: 146298904
Following gene: 146298906
Centisome position: 21.2
GC content: 38.73
Gene sequence:
>816_bases ATGAAACGAATTACGATATTATTTCTCAGTACGGCTTTTTTTATATTGTCATTTAATGTTTGTGCACAAGATGCACCGCC AAAAACAGGAGCAAGCGCACAGGAACTGGCAGATAAACTGGCTAATCCCGTCGCAAGTTTAATTAGTGTCCCGCTGCAAA ATAATCTTACTTACGGGATTGGTCCATACAATGGAATAAAATATCAGATTAATATACAACCTGTTGTTCCATTTAAATTG AGTGAGAATCTCAACTTAATTACTCGCTATATTCTCCCGGTTGTAGATCAGCAGGATGTAACGGGAGCAAACACGCACGA GTTTGGTTTAAGCGATGCAACAATAACAGCCTTTTTTGCTCCTAAAACAAAAGGAATCATCTTTGGGGCTGGTCCGGCCT TTTTAGTACCAACCGCTACAGAAAAACTTTTAGGAACAGAAAAATTTGGAATTGGGCCAAGTGTTTTGGTTATGCATCAG GGAAAAGGACTATCTATAGGTTTTTTAGCCAATCAAATTTGGTCAGTAGCAGGAGCATCAGATCGCGCTGATTTCAATCA ATTTTACACTCAGATATTTCTAACACATAGTTATAAAAGCGGTGCAAGTTTAGGGGTCAGTTCAGAAATTACACAAAACT GGCAGGGAAACACAACACTTATTACGCTTAGTCCAAATGTTGGCGCAATTACAAAATTAGGCAGTCAGACAATGCAATTT GCTGTGATGCCGTTAATTCCAATTGTAGGACATCAATCTATAAAACCTGATTGGGGTCTAAGAGCTGTTGTAGCATTTGT ATTTCCGGGATCTTAA
Upstream 100 bases:
>100_bases TAAATAATTTTGAATTAGTTAAGATTAATGAGACAGCTTTTGCTGGCCAAAAGTTGTTTCATTTTGATTTTGCGATGAAT GATTTCTTAAATGAATTACT
Downstream 100 bases:
>100_bases AACCGTCTAATAAAAAAATAGGAACTCACATCTTAATTAAAGATATGACATATTCCATGGAAAATTAGAGACGTGACAGA AGTAAAATAAATCATTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKRITILFLSTAFFILSFNVCAQDAPPKTGASAQELADKLANPVASLISVPLQNNLTYGIGPYNGIKYQINIQPVVPFKL SENLNLITRYILPVVDQQDVTGANTHEFGLSDATITAFFAPKTKGIIFGAGPAFLVPTATEKLLGTEKFGIGPSVLVMHQ GKGLSIGFLANQIWSVAGASDRADFNQFYTQIFLTHSYKSGASLGVSSEITQNWQGNTTLITLSPNVGAITKLGSQTMQF AVMPLIPIVGHQSIKPDWGLRAVVAFVFPGS
Sequences:
>Translated_271_residues MKRITILFLSTAFFILSFNVCAQDAPPKTGASAQELADKLANPVASLISVPLQNNLTYGIGPYNGIKYQINIQPVVPFKL SENLNLITRYILPVVDQQDVTGANTHEFGLSDATITAFFAPKTKGIIFGAGPAFLVPTATEKLLGTEKFGIGPSVLVMHQ GKGLSIGFLANQIWSVAGASDRADFNQFYTQIFLTHSYKSGASLGVSSEITQNWQGNTTLITLSPNVGAITKLGSQTMQF AVMPLIPIVGHQSIKPDWGLRAVVAFVFPGS >Mature_271_residues MKRITILFLSTAFFILSFNVCAQDAPPKTGASAQELADKLANPVASLISVPLQNNLTYGIGPYNGIKYQINIQPVVPFKL SENLNLITRYILPVVDQQDVTGANTHEFGLSDATITAFFAPKTKGIIFGAGPAFLVPTATEKLLGTEKFGIGPSVLVMHQ GKGLSIGFLANQIWSVAGASDRADFNQFYTQIFLTHSYKSGASLGVSSEITQNWQGNTTLITLSPNVGAITKLGSQTMQF AVMPLIPIVGHQSIKPDWGLRAVVAFVFPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29035; Mature: 29035
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRITILFLSTAFFILSFNVCAQDAPPKTGASAQELADKLANPVASLISVPLQNNLTYGI CCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCCCEECC GPYNGIKYQINIQPVVPFKLSENLNLITRYILPVVDQQDVTGANTHEFGLSDATITAFFA CCCCCEEEEEEEEEEECEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC PKTKGIIFGAGPAFLVPTATEKLLGTEKFGIGPSVLVMHQGKGLSIGFLANQIWSVAGAS CCCCEEEEECCCCEEECCCHHHHHCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCC DRADFNQFYTQIFLTHSYKSGASLGVSSEITQNWQGNTTLITLSPNVGAITKLGSQTMQF CCHHHHHHHHEEEEEECCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHCHHHHHH AVMPLIPIVGHQSIKPDWGLRAVVAFVFPGS HHHHHHHHCCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MKRITILFLSTAFFILSFNVCAQDAPPKTGASAQELADKLANPVASLISVPLQNNLTYGI CCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCCCEECC GPYNGIKYQINIQPVVPFKLSENLNLITRYILPVVDQQDVTGANTHEFGLSDATITAFFA CCCCCEEEEEEEEEEECEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEC PKTKGIIFGAGPAFLVPTATEKLLGTEKFGIGPSVLVMHQGKGLSIGFLANQIWSVAGAS CCCCEEEEECCCCEEECCCHHHHHCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHCCCC DRADFNQFYTQIFLTHSYKSGASLGVSSEITQNWQGNTTLITLSPNVGAITKLGSQTMQF CCHHHHHHHHEEEEEECCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHCHHHHHH AVMPLIPIVGHQSIKPDWGLRAVVAFVFPGS HHHHHHHHCCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA