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The map label for this gene is rfbU [H]

Identifier: 146298796

GI number: 146298796

Start: 1178785

End: 1179885

Strand: Direct

Name: rfbU [H]

Synonym: Fjoh_1035

Alternate gene names: 146298796

Gene position: 1178785-1179885 (Clockwise)

Preceding gene: 146298791

Following gene: 146298797

Centisome position: 19.33

GC content: 26.43

Gene sequence:

>1101_bases
ATGAAATTAGTAATTGATGTTCGTTTTATAAATGCTTCGGGAATTGGTACTTACATAAAAAATGTGTTGCCGGGTATAAT
TTCAGAATTTAATGCAGTTACAGTTCTTGGAAACAAAAATGAAATCATGCAATTTGATTGGAGTAATAAAGTTGAGGTTA
TAGAGTTCAATTGTAAAATGTATTCTCTAAAAGAACAATTTTATTATGCTTTTAAAATACCAAAATGTGATGTGTTTTGG
TCTCCACATTTTAATTTTCCTATTTTTCCTATTCGTGCAAAGAAAAAAGTTGTAACAATTCATGACGTAAATCATCTTAC
CGGGATTTCTCCAATTTCTTTCCTTAAAAAAAAGTATAGTTCTATTTTATATGATAATGCAGTAAAAAAAGCAGATTTAA
TTTTTACTGTTTCAGAATTTTCAAAAAGTGAGATTCTAAAATATACCAACACCGAATCTGAAAAAATTAAAGTAGTTTAT
TGTGGAGTAGATGCGCCATTTTTTGAAGATTTTAAAGAGAATAGTTTAAGACTTCCAAACGATTTTATTTTATATATAGG
AAATGTCAAACCTCATAAAAATTTAATTGTTTTATTAAAAGCTTATAATGCTTTATCAAATCAATTAAAAGAAGAATATA
AACTTTTAATTGTAGGTAAAAAAGATGGATTTATTACGGAAGATAATCAGATAAATGAATTCATAAAATCGAACCAATTA
GAAAGAAATGTTATTTTTACAGGACATGTAACTGATTTAGATTTGCCTTTATATTATCAAAATGCATCGTTATTTGTATT
TCCATCTCTTTACGAAGGTTTTGGATTACCAGTTTTAGAAGCATTGGCAGCAAAAACAATGGTGATTAGTTCTAACGCTT
CAAGTCTGCCGGAAATAGGAGGAGAAGCTGTTATTTATTTTGATCCAAAAAATGATATAGAGTTGTCTCAAAAAATAAAA
GACTGTTTAGAAAATAAAGTAAGCATTGAAATAGAAAAAAGGGCAGTACAATTAGATAAATTTACTTGGAAAAAATCTAT
TAAAAATCATTTGGAAGCATTTAGAAATATTTTACAAAATAATGAAAAAAGCACTAATTAG

Upstream 100 bases:

>100_bases
TAATTTTTTTTATTAAAGGTGAATGTGTTTTAAACAAAAAATAAACATCATTAAATTTTTAAAACTTACTTTTGAAAAGG
ATTATAACCAATTAATATAA

Downstream 100 bases:

>100_bases
CGATTGGTATTATGTGAATGGAGGTGCTGAAAAAGTAATTCATTCTATAAACTCAATCTGGGATGATTTTGACCATTTTG
CATTAATTGACTTTTTGAAT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKLVIDVRFINASGIGTYIKNVLPGIISEFNAVTVLGNKNEIMQFDWSNKVEVIEFNCKMYSLKEQFYYAFKIPKCDVFW
SPHFNFPIFPIRAKKKVVTIHDVNHLTGISPISFLKKKYSSILYDNAVKKADLIFTVSEFSKSEILKYTNTESEKIKVVY
CGVDAPFFEDFKENSLRLPNDFILYIGNVKPHKNLIVLLKAYNALSNQLKEEYKLLIVGKKDGFITEDNQINEFIKSNQL
ERNVIFTGHVTDLDLPLYYQNASLFVFPSLYEGFGLPVLEALAAKTMVISSNASSLPEIGGEAVIYFDPKNDIELSQKIK
DCLENKVSIEIEKRAVQLDKFTWKKSIKNHLEAFRNILQNNEKSTN

Sequences:

>Translated_366_residues
MKLVIDVRFINASGIGTYIKNVLPGIISEFNAVTVLGNKNEIMQFDWSNKVEVIEFNCKMYSLKEQFYYAFKIPKCDVFW
SPHFNFPIFPIRAKKKVVTIHDVNHLTGISPISFLKKKYSSILYDNAVKKADLIFTVSEFSKSEILKYTNTESEKIKVVY
CGVDAPFFEDFKENSLRLPNDFILYIGNVKPHKNLIVLLKAYNALSNQLKEEYKLLIVGKKDGFITEDNQINEFIKSNQL
ERNVIFTGHVTDLDLPLYYQNASLFVFPSLYEGFGLPVLEALAAKTMVISSNASSLPEIGGEAVIYFDPKNDIELSQKIK
DCLENKVSIEIEKRAVQLDKFTWKKSIKNHLEAFRNILQNNEKSTN
>Mature_366_residues
MKLVIDVRFINASGIGTYIKNVLPGIISEFNAVTVLGNKNEIMQFDWSNKVEVIEFNCKMYSLKEQFYYAFKIPKCDVFW
SPHFNFPIFPIRAKKKVVTIHDVNHLTGISPISFLKKKYSSILYDNAVKKADLIFTVSEFSKSEILKYTNTESEKIKVVY
CGVDAPFFEDFKENSLRLPNDFILYIGNVKPHKNLIVLLKAYNALSNQLKEEYKLLIVGKKDGFITEDNQINEFIKSNQL
ERNVIFTGHVTDLDLPLYYQNASLFVFPSLYEGFGLPVLEALAAKTMVISSNASSLPEIGGEAVIYFDPKNDIELSQKIK
DCLENKVSIEIEKRAVQLDKFTWKKSIKNHLEAFRNILQNNEKSTN

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41995; Mature: 41995

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIDVRFINASGIGTYIKNVLPGIISEFNAVTVLGNKNEIMQFDWSNKVEVIEFNCKM
CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEEEEECCEE
YSLKEQFYYAFKIPKCDVFWSPHFNFPIFPIRAKKKVVTIHDVNHLTGISPISFLKKKYS
EEECCEEEEEEECCCEEEEECCCCCCCEEEEECCCEEEEEEECCHHCCCCHHHHHHHHHH
SILYDNAVKKADLIFTVSEFSKSEILKYTNTESEKIKVVYCGVDAPFFEDFKENSLRLPN
HHHHHCCCCCEEEEEEEHHCCCHHHEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCC
DFILYIGNVKPHKNLIVLLKAYNALSNQLKEEYKLLIVGKKDGFITEDNQINEFIKSNQL
EEEEEECCCCCCCCEEEEEEHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHCCCC
ERNVIFTGHVTDLDLPLYYQNASLFVFPSLYEGFGLPVLEALAAKTMVISSNASSLPEIG
CCEEEEEECEEECCCEEEEECCCEEEECCHHCCCCCHHHHHHHHHEEEEECCCCCCCCCC
GEAVIYFDPKNDIELSQKIKDCLENKVSIEIEKRAVQLDKFTWKKSIKNHLEAFRNILQN
CCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEKSTN
CCCCCC
>Mature Secondary Structure
MKLVIDVRFINASGIGTYIKNVLPGIISEFNAVTVLGNKNEIMQFDWSNKVEVIEFNCKM
CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEEEEECCEE
YSLKEQFYYAFKIPKCDVFWSPHFNFPIFPIRAKKKVVTIHDVNHLTGISPISFLKKKYS
EEECCEEEEEEECCCEEEEECCCCCCCEEEEECCCEEEEEEECCHHCCCCHHHHHHHHHH
SILYDNAVKKADLIFTVSEFSKSEILKYTNTESEKIKVVYCGVDAPFFEDFKENSLRLPN
HHHHHCCCCCEEEEEEEHHCCCHHHEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCC
DFILYIGNVKPHKNLIVLLKAYNALSNQLKEEYKLLIVGKKDGFITEDNQINEFIKSNQL
EEEEEECCCCCCCCEEEEEEHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHCCCC
ERNVIFTGHVTDLDLPLYYQNASLFVFPSLYEGFGLPVLEALAAKTMVISSNASSLPEIG
CCEEEEEECEEECCCEEEEECCCEEEECCHHCCCCCHHHHHHHHHEEEEECCCCCCCCCC
GEAVIYFDPKNDIELSQKIKDCLENKVSIEIEKRAVQLDKFTWKKSIKNHLEAFRNILQN
CCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NEKSTN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]