| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298790
Identifier: 146298790
GI number: 146298790
Start: 1172878
End: 1173855
Strand: Direct
Name: 146298790
Synonym: Fjoh_1029
Alternate gene names: NA
Gene position: 1172878-1173855 (Clockwise)
Preceding gene: 146298789
Following gene: 146298791
Centisome position: 19.24
GC content: 24.74
Gene sequence:
>978_bases ATGAGTACAAAAGTACCGCAGGATATCACAGATCAAGAGGTTGATTTGGTTTTGATTTCAAAAAAAATAAGTAACTTTTT TGAAAGAATTAATACTTCTATCTTTAGAAGCATTCAATTCTTTATACGAAATTGGCTGATTGTCTTGATTTTAGTTGTTG TAGGATTTGGAACAGGACTTTTTTTAGATAAGACTCAAAAAACATATAATAATCAAATAATTGTAACACCAAATTTTGGC AGTGTCGATTATTTATACGGTAAGGTTGATTTAATTCAATCGAAAATTATAACTGATGACAAATCATTTTTTAATAAAAT TGGATTAACAGAGAATTCAAGAATATCCAATATAAAAATAGAACCAATTGTTGATGTTTTTAAGTTTGTTAATAACAATG AGCAAAATTTAGAGGTTTTAAAGTTAATGACAAACGGAGACTTAAAATCTATAATTAAGGAAACAACCACTACTAAAAAT TATCCTTTTTACATTATTACTTTTTCAACCAAATTTCCATTGAAAGATGAAAATACGGTAAAAGCATTATTGAATTATTT TAATACAAGTGATTATTATGCTGAGGTACAAAAAACAACTGTAGATAATATCAAACAAAAGATAAAGGCAAATGATCAAA TTCTTTTGCAAATTGATAATATTCTAAACAAATTTTCTAATTCAGAATCGTTGGGTTCAGTAAAAAATGATAAGCTGGTA TATTATAATGAAAACATACAGCTTAATGATATACTTAAAACAAAAGAAGGTCTTGTTAGAGAAAATGGAGTCTTAAAAGT AGAGTTAATTACTTCTAATAAAATTATAAAAGAAAGTTCAATCGTTACAAATATTGAAAATTTTGAAACTTTAAAGGGAA AAATGAGGTTTATTTTACCATTTTTGTTTGTATTTGCTTTTATTAGTATAGTATTTTTAAAAAGATTTTATAAAAAACAA CAGGCATTACAAGCCTAA
Upstream 100 bases:
>100_bases ATTGGCTTCGGGCGGATTAGGAACGACTGGAGTAAAACCAACGTATTTAATTACGATTAAGATTTTAGAACAGATTTTCA ACATCAAATAATAATTGTAA
Downstream 100 bases:
>100_bases TTATTATCGTAGGCAGTCATTTCTTATTTTTAAGATGAAAAACATTTTATTACTTAAATTAAATAATGAAAGACTAAGAG AGATTTTATTTTTTTTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSTKVPQDITDQEVDLVLISKKISNFFERINTSIFRSIQFFIRNWLIVLILVVVGFGTGLFLDKTQKTYNNQIIVTPNFG SVDYLYGKVDLIQSKIITDDKSFFNKIGLTENSRISNIKIEPIVDVFKFVNNNEQNLEVLKLMTNGDLKSIIKETTTTKN YPFYIITFSTKFPLKDENTVKALLNYFNTSDYYAEVQKTTVDNIKQKIKANDQILLQIDNILNKFSNSESLGSVKNDKLV YYNENIQLNDILKTKEGLVRENGVLKVELITSNKIIKESSIVTNIENFETLKGKMRFILPFLFVFAFISIVFLKRFYKKQ QALQA
Sequences:
>Translated_325_residues MSTKVPQDITDQEVDLVLISKKISNFFERINTSIFRSIQFFIRNWLIVLILVVVGFGTGLFLDKTQKTYNNQIIVTPNFG SVDYLYGKVDLIQSKIITDDKSFFNKIGLTENSRISNIKIEPIVDVFKFVNNNEQNLEVLKLMTNGDLKSIIKETTTTKN YPFYIITFSTKFPLKDENTVKALLNYFNTSDYYAEVQKTTVDNIKQKIKANDQILLQIDNILNKFSNSESLGSVKNDKLV YYNENIQLNDILKTKEGLVRENGVLKVELITSNKIIKESSIVTNIENFETLKGKMRFILPFLFVFAFISIVFLKRFYKKQ QALQA >Mature_324_residues STKVPQDITDQEVDLVLISKKISNFFERINTSIFRSIQFFIRNWLIVLILVVVGFGTGLFLDKTQKTYNNQIIVTPNFGS VDYLYGKVDLIQSKIITDDKSFFNKIGLTENSRISNIKIEPIVDVFKFVNNNEQNLEVLKLMTNGDLKSIIKETTTTKNY PFYIITFSTKFPLKDENTVKALLNYFNTSDYYAEVQKTTVDNIKQKIKANDQILLQIDNILNKFSNSESLGSVKNDKLVY YNENIQLNDILKTKEGLVRENGVLKVELITSNKIIKESSIVTNIENFETLKGKMRFILPFLFVFAFISIVFLKRFYKKQQ ALQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37554; Mature: 37423
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKVPQDITDQEVDLVLISKKISNFFERINTSIFRSIQFFIRNWLIVLILVVVGFGTGL CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE FLDKTQKTYNNQIIVTPNFGSVDYLYGKVDLIQSKIITDDKSFFNKIGLTENSRISNIKI EEECHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEE EPIVDVFKFVNNNEQNLEVLKLMTNGDLKSIIKETTTTKNYPFYIITFSTKFPLKDENTV HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHH KALLNYFNTSDYYAEVQKTTVDNIKQKIKANDQILLQIDNILNKFSNSESLGSVKNDKLV HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEE YYNENIQLNDILKTKEGLVRENGVLKVELITSNKIIKESSIVTNIENFETLKGKMRFILP EEECCEEEHHHHHHHHHHHHCCCEEEEEEECCCCEEEHHHHHHCHHHHHHHHHHHHHHHH FLFVFAFISIVFLKRFYKKQQALQA HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STKVPQDITDQEVDLVLISKKISNFFERINTSIFRSIQFFIRNWLIVLILVVVGFGTGL CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE FLDKTQKTYNNQIIVTPNFGSVDYLYGKVDLIQSKIITDDKSFFNKIGLTENSRISNIKI EEECHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEE EPIVDVFKFVNNNEQNLEVLKLMTNGDLKSIIKETTTTKNYPFYIITFSTKFPLKDENTV HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHH KALLNYFNTSDYYAEVQKTTVDNIKQKIKANDQILLQIDNILNKFSNSESLGSVKNDKLV HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEE YYNENIQLNDILKTKEGLVRENGVLKVELITSNKIIKESSIVTNIENFETLKGKMRFILP EEECCEEEHHHHHHHHHHHHCCCEEEEEEECCCCEEEHHHHHHCHHHHHHHHHHHHHHHH FLFVFAFISIVFLKRFYKKQQALQA HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA