| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298616
Identifier: 146298616
GI number: 146298616
Start: 965508
End: 966065
Strand: Direct
Name: 146298616
Synonym: Fjoh_0854
Alternate gene names: NA
Gene position: 965508-966065 (Clockwise)
Preceding gene: 146298615
Following gene: 146298617
Centisome position: 15.84
GC content: 36.38
Gene sequence:
>558_bases ATGAACCCGACTTTCTTCGCAACTCAAGAAAAATTTAGAGAATGGCTGGAAAAGCATTATAAAAAAGAAACCGAACTGTT AGTAGGTTTTTATAAGGTGAACAGCAAAAAGCCGTCTATGTCCTGGTCAGAATCTGTAGATCAGGCGCTTTGTTTTGGCT GGATCGATGGTGTTCGAAGATCTATTGACGAAGAAAGTTATTCGATACGTTTTACTCCAAGAAAAAAATCAAGTATCTGG AGCGCCATCAACATTAAAAAAGTAGAAGCACTCACAAAAGCCGGATTGATGAAAGAAGAAGGCATAAAAGCTTTTGAATT AAGATCTGAAGAAAGATCCAAAATTTACTCGCATGAAAACGAAGCTTACGTTCTTGATCCCGAACTTGAAAAACAATTTA AAGCCCATAAAACAGCTTGGGAATATTTTAGCAGTCAGGCGCCATCATACAGAAAAGTAATAATACATGTGATTATGAGC GCCAAACAAGAAAAAACCAGAATTGCAAGATTGGAAAAAGCAATAAAATTTAGCGCTGAAGGAAAACGAATGTTGTAA
Upstream 100 bases:
>100_bases AAACATTGGATTGAAAATGAACTTCCCCAATTACAGAAAGAAGTTAAACGGGAAATTGACGTTTGCTGGAAAGAATTAAA TGAATAATAAAACTTAAAAA
Downstream 100 bases:
>100_bases AGGTTGTTGCTTTGATATTTTTTAAACTGTAACTTTATTCCGTCTAAACAAGCTCAGCTATAAAAAAGGAAAATATGGAG GGAAGAACAGCATTAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNPTFFATQEKFREWLEKHYKKETELLVGFYKVNSKKPSMSWSESVDQALCFGWIDGVRRSIDEESYSIRFTPRKKSSIW SAINIKKVEALTKAGLMKEEGIKAFELRSEERSKIYSHENEAYVLDPELEKQFKAHKTAWEYFSSQAPSYRKVIIHVIMS AKQEKTRIARLEKAIKFSAEGKRML
Sequences:
>Translated_185_residues MNPTFFATQEKFREWLEKHYKKETELLVGFYKVNSKKPSMSWSESVDQALCFGWIDGVRRSIDEESYSIRFTPRKKSSIW SAINIKKVEALTKAGLMKEEGIKAFELRSEERSKIYSHENEAYVLDPELEKQFKAHKTAWEYFSSQAPSYRKVIIHVIMS AKQEKTRIARLEKAIKFSAEGKRML >Mature_185_residues MNPTFFATQEKFREWLEKHYKKETELLVGFYKVNSKKPSMSWSESVDQALCFGWIDGVRRSIDEESYSIRFTPRKKSSIW SAINIKKVEALTKAGLMKEEGIKAFELRSEERSKIYSHENEAYVLDPELEKQFKAHKTAWEYFSSQAPSYRKVIIHVIMS AKQEKTRIARLEKAIKFSAEGKRML
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21757; Mature: 21757
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTFFATQEKFREWLEKHYKKETELLVGFYKVNSKKPSMSWSESVDQALCFGWIDGVRR CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH SIDEESYSIRFTPRKKSSIWSAINIKKVEALTKAGLMKEEGIKAFELRSEERSKIYSHEN HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCHHHHHHHCCCC EAYVLDPELEKQFKAHKTAWEYFSSQAPSYRKVIIHVIMSAKQEKTRIARLEKAIKFSAE CEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKRML CCCCC >Mature Secondary Structure MNPTFFATQEKFREWLEKHYKKETELLVGFYKVNSKKPSMSWSESVDQALCFGWIDGVRR CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH SIDEESYSIRFTPRKKSSIWSAINIKKVEALTKAGLMKEEGIKAFELRSEERSKIYSHEN HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCCHHHHHHHCCCC EAYVLDPELEKQFKAHKTAWEYFSSQAPSYRKVIIHVIMSAKQEKTRIARLEKAIKFSAE CEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKRML CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA