| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298615
Identifier: 146298615
GI number: 146298615
Start: 965003
End: 965494
Strand: Direct
Name: 146298615
Synonym: Fjoh_0853
Alternate gene names: NA
Gene position: 965003-965494 (Clockwise)
Preceding gene: 146298614
Following gene: 146298616
Centisome position: 15.83
GC content: 30.49
Gene sequence:
>492_bases ATGGGAGTTTTTAACCGGAACAAAAACAAATCTGAAAATATTGAGTTTGAAGAAGCTTTTTCTAGTCTAAAAAGAATGGG AGAAATTGTTCCGAGTGCGAAAAAAACCTTTGAATTACTGACAGAATTCAATTCAAGAACAACAGATTTTGAATGGAATA ATTTGATTTCTGAATTTCATAAAATACAATACGCCTCTAACACCAACAGCTATTTTTATTTCTATCTGCCAATAGTCAGT TATATTTTGTATTACAAACCACAATACGAAAAAGAACTTCTGAGATATTTAATTGCGCCTAATTTTGCCAACGGAACATC TGAAACTGATGAAATGATTGAAATAATTCATGGCGCGATGAAATACAAACTCAACGAAAACCAATATTATTTAACTAAAG AAAGTAAACATTGGATTGAAAATGAACTTCCCCAATTACAGAAAGAAGTTAAACGGGAAATTGACGTTTGCTGGAAAGAA TTAAATGAATAA
Upstream 100 bases:
>100_bases CAATGGAAGACCTAACCACAACAATACAATATCTTTGTTCCTTTAATTATATATTTTGGCAGTTATTTTTATAAGAAATC GAAATTAAAAAGACAGACAA
Downstream 100 bases:
>100_bases TAAAACTTAAAAAATGAACCCGACTTTCTTCGCAACTCAAGAAAAATTTAGAGAATGGCTGGAAAAGCATTATAAAAAAG AAACCGAACTGTTAGTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MGVFNRNKNKSENIEFEEAFSSLKRMGEIVPSAKKTFELLTEFNSRTTDFEWNNLISEFHKIQYASNTNSYFYFYLPIVS YILYYKPQYEKELLRYLIAPNFANGTSETDEMIEIIHGAMKYKLNENQYYLTKESKHWIENELPQLQKEVKREIDVCWKE LNE
Sequences:
>Translated_163_residues MGVFNRNKNKSENIEFEEAFSSLKRMGEIVPSAKKTFELLTEFNSRTTDFEWNNLISEFHKIQYASNTNSYFYFYLPIVS YILYYKPQYEKELLRYLIAPNFANGTSETDEMIEIIHGAMKYKLNENQYYLTKESKHWIENELPQLQKEVKREIDVCWKE LNE >Mature_162_residues GVFNRNKNKSENIEFEEAFSSLKRMGEIVPSAKKTFELLTEFNSRTTDFEWNNLISEFHKIQYASNTNSYFYFYLPIVSY ILYYKPQYEKELLRYLIAPNFANGTSETDEMIEIIHGAMKYKLNENQYYLTKESKHWIENELPQLQKEVKREIDVCWKEL NE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19632; Mature: 19501
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVFNRNKNKSENIEFEEAFSSLKRMGEIVPSAKKTFELLTEFNSRTTDFEWNNLISEFH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH KIQYASNTNSYFYFYLPIVSYILYYKPQYEKELLRYLIAPNFANGTSETDEMIEIIHGAM HHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH KYKLNENQYYLTKESKHWIENELPQLQKEVKREIDVCWKELNE HHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GVFNRNKNKSENIEFEEAFSSLKRMGEIVPSAKKTFELLTEFNSRTTDFEWNNLISEFH CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH KIQYASNTNSYFYFYLPIVSYILYYKPQYEKELLRYLIAPNFANGTSETDEMIEIIHGAM HHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH KYKLNENQYYLTKESKHWIENELPQLQKEVKREIDVCWKELNE HHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA