| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is mhpC [H]
Identifier: 146298456
GI number: 146298456
Start: 758719
End: 759495
Strand: Direct
Name: mhpC [H]
Synonym: Fjoh_0693
Alternate gene names: 146298456
Gene position: 758719-759495 (Clockwise)
Preceding gene: 146298455
Following gene: 146298464
Centisome position: 12.44
GC content: 33.98
Gene sequence:
>777_bases TTGAAAACGCTTTTATATAAAAACACCACGATTTCATACTCAGATTCAGGAACTGGAAACGCAATTGTTTTACTGCACGG CTTTTTGGAAAACAAAAAAATGTGGAAAGACTATGTTGCTTTTTTTTCAGAAAAATATCGCGTCATAACAATCGATTTAT TAGGTCATGGCGAATCTGATCCATTAGGCTATGTTCATGAAATGGAAGATAATGCCAATGTTATAAACGAAATTTTAGAA CATTTAAAAATAGAAAAAGCGATAATTCTTGGGCATTCAATGGGCGGATATGTTGGTTTGGCTTTCGCCGAATTGTATCC GCAGAAAATACAGAAATTGGTTTTACTAAATTCAACTTCAAAAGAAGACAGCGCCGAAAAAAAATTAAACAGAACCCGGG CCATAAAAGCTGTAAAACAAAACTATATCAACTTTGTCAGCTTAGCCATTGCTAATTTATTCAGCGAAAACAATAGAACG CGATTAGCAGAAGAAATTGAAAAGGCAAAAATAGAAGCTTTAAAAACTCCTTTGCAGGGAATTATAGCTTCATTGGAAGG AATGAAAATACGAAAAGACCGAGAGTGGCTGTTAGAACAAAACCGCTTTCCTGTTTTATTAATTTTAGGAAAAAAAGATC CTGTTTTAAGCTACGAAGAAAGTCTTTCGCAAGCAGAGAATACATCTGTACAATTAGTTTCTTTTGAAGACGGGCATATG AGCCAAATTGAAAACAAAGAAGAATTGAAGCCTGTTTTATTACAGTTCTTCAACTAA
Upstream 100 bases:
>100_bases AATTTATTACTACTTTAAAGATTTCCCAATTAAACCAAGACATTTCGATATTTTACTCCAGCTTTCTTAACTTTGTGCTT CATAACAAAAAAAGTTCATT
Downstream 100 bases:
>100_bases AATTAAAGGAAAATATTAAAAGCAGAAAAGGCCATTTCGAAATGATATCGAAACAGCCTTTTCTTCATTTTGGGGGCAAA AATTATAATTTTGTAATAAT
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKTLLYKNTTISYSDSGTGNAIVLLHGFLENKKMWKDYVAFFSEKYRVITIDLLGHGESDPLGYVHEMEDNANVINEILE HLKIEKAIILGHSMGGYVGLAFAELYPQKIQKLVLLNSTSKEDSAEKKLNRTRAIKAVKQNYINFVSLAIANLFSENNRT RLAEEIEKAKIEALKTPLQGIIASLEGMKIRKDREWLLEQNRFPVLLILGKKDPVLSYEESLSQAENTSVQLVSFEDGHM SQIENKEELKPVLLQFFN
Sequences:
>Translated_258_residues MKTLLYKNTTISYSDSGTGNAIVLLHGFLENKKMWKDYVAFFSEKYRVITIDLLGHGESDPLGYVHEMEDNANVINEILE HLKIEKAIILGHSMGGYVGLAFAELYPQKIQKLVLLNSTSKEDSAEKKLNRTRAIKAVKQNYINFVSLAIANLFSENNRT RLAEEIEKAKIEALKTPLQGIIASLEGMKIRKDREWLLEQNRFPVLLILGKKDPVLSYEESLSQAENTSVQLVSFEDGHM SQIENKEELKPVLLQFFN >Mature_258_residues MKTLLYKNTTISYSDSGTGNAIVLLHGFLENKKMWKDYVAFFSEKYRVITIDLLGHGESDPLGYVHEMEDNANVINEILE HLKIEKAIILGHSMGGYVGLAFAELYPQKIQKLVLLNSTSKEDSAEKKLNRTRAIKAVKQNYINFVSLAIANLFSENNRT RLAEEIEKAKIEALKTPLQGIIASLEGMKIRKDREWLLEQNRFPVLLILGKKDPVLSYEESLSQAENTSVQLVSFEDGHM SQIENKEELKPVLLQFFN
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mhpC alpha/beta hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI218777837, Length=143, Percent_Identity=28.6713286713287, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87081721, Length=265, Percent_Identity=26.0377358490566, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17554012, Length=115, Percent_Identity=30.4347826086957, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 29348; Mature: 29348
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLYKNTTISYSDSGTGNAIVLLHGFLENKKMWKDYVAFFSEKYRVITIDLLGHGESD CCCEEEECCEEEECCCCCCCEEEEEEEHHHCHHHHHHHHHHHHCCCEEEEEEEECCCCCC PLGYVHEMEDNANVINEILEHLKIEKAIILGHSMGGYVGLAFAELYPQKIQKLVLLNSTS CCCHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC KEDSAEKKLNRTRAIKAVKQNYINFVSLAIANLFSENNRTRLAEEIEKAKIEALKTPLQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IIASLEGMKIRKDREWLLEQNRFPVLLILGKKDPVLSYEESLSQAENTSVQLVSFEDGHM HHHHHCCCEECCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCH SQIENKEELKPVLLQFFN HHCCCHHHHHHHHHHHCC >Mature Secondary Structure MKTLLYKNTTISYSDSGTGNAIVLLHGFLENKKMWKDYVAFFSEKYRVITIDLLGHGESD CCCEEEECCEEEECCCCCCCEEEEEEEHHHCHHHHHHHHHHHHCCCEEEEEEEECCCCCC PLGYVHEMEDNANVINEILEHLKIEKAIILGHSMGGYVGLAFAELYPQKIQKLVLLNSTS CCCHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC KEDSAEKKLNRTRAIKAVKQNYINFVSLAIANLFSENNRTRLAEEIEKAKIEALKTPLQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IIASLEGMKIRKDREWLLEQNRFPVLLILGKKDPVLSYEESLSQAENTSVQLVSFEDGHM HHHHHCCCEECCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCH SQIENKEELKPVLLQFFN HHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA