| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is pip [H]
Identifier: 146298452
GI number: 146298452
Start: 755281
End: 756192
Strand: Direct
Name: pip [H]
Synonym: Fjoh_0689
Alternate gene names: 146298452
Gene position: 755281-756192 (Clockwise)
Preceding gene: 146298451
Following gene: 146298455
Centisome position: 12.39
GC content: 33.55
Gene sequence:
>912_bases ATGAATAATTCACTGATGAAAAAGATTTTTCTCTTTGGCTTTTTATTGTTTCTGGCAAATATTTACGCGCAAACCGAAGG TTATGCCGTAAATAACGACGGAAGCAAAACATATTACAAAACATTCGGAAAAGGCGAACCGCTTTTAATTATAAACGGCG GCCCGGGAATGAACAGTAATGGTTTTGAAGATATGGCAAAAACTTTGGGCGAAAATCAGCAAACAATTATTTATGACCAA AGAGGAACCGGAAAATCGAAACTTTCAAAATTAGACGCTAAGACAATTTCTATGCGTTTAATGATTGATGATATTGAATC ATTGAGAAAACATCTTAAAATCAAAAAATGGAATATTCTCGGACATTCTTTTGGAGGAATGTTGGGTTCATATTACGCAA CTATTTATCCCAACAGTATCAACAAGTTGATTTTATCTTCTTCTGGAGGTGTAGATTTATCTTTATTGAAAGGCCCGAAT TTAATCGAATCGAATCTTTCGAAAGTTGAAATAGATTCTATGAATTACTGGAATGATAAAATCGAAAAAGGCGATACATC TCACAAAGCAAGACTCGGACGCGGTCGTGCCATGGCTCCGGCTTATGTCTACGATCAAAAATTTATTCCGATTATTGCCG AAAGATTAACTCAGGGAAATTCGACAATCAATGGTTTGTTATGGTCGGACATGCAGAAAATGAATTTTGACTATAAATCT AAACTGAAGAATTTCAAAAATCCTGTTTTAATTATTCAGGGAAAAGAAGATATTATCAGCAATGAAATTGGAGAATTGGC ACATAAGACTTTTCCAAATTCGAAATTGATTTTATTAGAACATTCCAAACATTACGGATGGCTTGATGCCAGAGAAAAGT ATTTCAACGATATTAATTCATTTTTAAAATAA
Upstream 100 bases:
>100_bases ATTCGTTTAGAAGATAATGTTGTGGTTCAGGAAAAAGGAGAACCTTTCAACTTGATGCGCAACATTCCTGTTGAAGCTGA CGAGATTGAAACATTGATGA
Downstream 100 bases:
>100_bases AATAAAAAGCTGTCTCAAAAGGACAGCTTTTTTGCTTCTCAAATATTTGCAAAATTTATTCTATGTGTAAAAACCCCAGC GGGGTGAAATTTTTATCTTA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MNNSLMKKIFLFGFLLFLANIYAQTEGYAVNNDGSKTYYKTFGKGEPLLIINGGPGMNSNGFEDMAKTLGENQQTIIYDQ RGTGKSKLSKLDAKTISMRLMIDDIESLRKHLKIKKWNILGHSFGGMLGSYYATIYPNSINKLILSSSGGVDLSLLKGPN LIESNLSKVEIDSMNYWNDKIEKGDTSHKARLGRGRAMAPAYVYDQKFIPIIAERLTQGNSTINGLLWSDMQKMNFDYKS KLKNFKNPVLIIQGKEDIISNEIGELAHKTFPNSKLILLEHSKHYGWLDAREKYFNDINSFLK
Sequences:
>Translated_303_residues MNNSLMKKIFLFGFLLFLANIYAQTEGYAVNNDGSKTYYKTFGKGEPLLIINGGPGMNSNGFEDMAKTLGENQQTIIYDQ RGTGKSKLSKLDAKTISMRLMIDDIESLRKHLKIKKWNILGHSFGGMLGSYYATIYPNSINKLILSSSGGVDLSLLKGPN LIESNLSKVEIDSMNYWNDKIEKGDTSHKARLGRGRAMAPAYVYDQKFIPIIAERLTQGNSTINGLLWSDMQKMNFDYKS KLKNFKNPVLIIQGKEDIISNEIGELAHKTFPNSKLILLEHSKHYGWLDAREKYFNDINSFLK >Mature_303_residues MNNSLMKKIFLFGFLLFLANIYAQTEGYAVNNDGSKTYYKTFGKGEPLLIINGGPGMNSNGFEDMAKTLGENQQTIIYDQ RGTGKSKLSKLDAKTISMRLMIDDIESLRKHLKIKKWNILGHSFGGMLGSYYATIYPNSINKLILSSSGGVDLSLLKGPN LIESNLSKVEIDSMNYWNDKIEKGDTSHKARLGRGRAMAPAYVYDQKFIPIIAERLTQGNSTINGLLWSDMQKMNFDYKS KLKNFKNPVLIIQGKEDIISNEIGELAHKTFPNSKLILLEHSKHYGWLDAREKYFNDINSFLK
Specific function: Releases the N-terminal proline from the dipeptides, Pro-Pro, Pro-Gln, Pro-Trp and Pro-Tyr. Also from amides (Pro-beta NA) and oligopeptides, Pro-Leu-GlyNH2, Pro-Leu-Gly and Pro-Phe- Gly-Lys. Higher activity toward small peptides (up to three residues), b
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR005945 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 34248; Mature: 34248
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSLMKKIFLFGFLLFLANIYAQTEGYAVNNDGSKTYYKTFGKGEPLLIINGGPGMNSN CCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHEECCCCCCEEEEECCCCCCCC GFEDMAKTLGENQQTIIYDQRGTGKSKLSKLDAKTISMRLMIDDIESLRKHLKIKKWNIL CHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHCEEEEEEC GHSFGGMLGSYYATIYPNSINKLILSSSGGVDLSLLKGPNLIESNLSKVEIDSMNYWNDK CHHHHHHHHHHEEEECCCCCCEEEEECCCCCEEEEECCCCHHHCCCCEEEECCCCCCCHH IEKGDTSHKARLGRGRAMAPAYVYDQKFIPIIAERLTQGNSTINGLLWSDMQKMNFDYKS HCCCCCHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH KLKNFKNPVLIIQGKEDIISNEIGELAHKTFPNSKLILLEHSKHYGWLDAREKYFNDINS HHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH FLK HCC >Mature Secondary Structure MNNSLMKKIFLFGFLLFLANIYAQTEGYAVNNDGSKTYYKTFGKGEPLLIINGGPGMNSN CCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHEECCCCCCEEEEECCCCCCCC GFEDMAKTLGENQQTIIYDQRGTGKSKLSKLDAKTISMRLMIDDIESLRKHLKIKKWNIL CHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHCEEEEEEC GHSFGGMLGSYYATIYPNSINKLILSSSGGVDLSLLKGPNLIESNLSKVEIDSMNYWNDK CHHHHHHHHHHEEEECCCCCCEEEEECCCCCEEEEECCCCHHHCCCCEEEECCCCCCCHH IEKGDTSHKARLGRGRAMAPAYVYDQKFIPIIAERLTQGNSTINGLLWSDMQKMNFDYKS HCCCCCHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH KLKNFKNPVLIIQGKEDIISNEIGELAHKTFPNSKLILLEHSKHYGWLDAREKYFNDINS HHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH FLK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1459939 [H]