| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298431
Identifier: 146298431
GI number: 146298431
Start: 731596
End: 732063
Strand: Direct
Name: 146298431
Synonym: Fjoh_0668
Alternate gene names: NA
Gene position: 731596-732063 (Clockwise)
Preceding gene: 146298430
Following gene: 146298432
Centisome position: 12.0
GC content: 39.53
Gene sequence:
>468_bases ATGAATTTATTACCTCAAGAAAAATTTGAAACTCTTGGTTTGTCTTTACCGCCGGCGCCTCAGCCTCTGGGCATATACAA ACCCTATTTAGTTGATGGTAAATATTTATACCTTTCTGGTCACGGGCCGGTTAGAGACGACAAATCCTTAATCATTGGCC GAATTGGCGATGATATGGATATCGAAGAAGGAAAATTAGCCGCAAGACAAGTGGGTTTAACTATGCTTTCTACAATTGTA ACCAATTTTGGAAGCCTGAATAAAGTAAAAAGAGTCATAAAAGTTTTAGGAATGGTCAATTGCAGCGGCGATTTTTTAAG ACATCCCTATGTAATAAACGGCTGCAGTGAATTATTTGCCGAAGTCTGGGGACAAGAAAACGGAATTGGAGTAAGAAGCG CCGTAGGAATGGGTTCTCTCCCAGACAATATTCCTGTTGAAGTTGAAGCTGTTTTCGAATTATTCTAA
Upstream 100 bases:
>100_bases CTAAAAGACACTTTTAAATCCTGGACCGTCATGGAATCTTTAGTATCTGTTTTAGGCATCATTTTCGTTTTTATTTTAAA CTCTATAATACATTAATATC
Downstream 100 bases:
>100_bases AAAATTAGACCACAGACGATAACGATTAAAGAGTAATCTGTATTGGTTAAGGAAATACTTTGATTCTAAGTCTGTGGTTA CGTTAAAAATATAGACCGCA
Product: endoribonuclease L-PSP
Products: NA
Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Translation Initiation Inhibitor Protein; Endoribonuclease; Transcription Regulator; Transcriptional Regulator; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-PSP Superfamily; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; Endoribonuclease-L-PSP Family Protein; Creatininase; Translation Initiation Inhibitor YjgF
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMDIEEGKLAARQVGLTMLSTIV TNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFAEVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF
Sequences:
>Translated_155_residues MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMDIEEGKLAARQVGLTMLSTIV TNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFAEVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF >Mature_155_residues MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMDIEEGKLAARQVGLTMLSTIV TNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFAEVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16907; Mature: 16907
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMD CCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCC IEEGKLAARQVGLTMLSTIVTNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFA CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCCCEEECCHHHHHH EVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF HHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MNLLPQEKFETLGLSLPPAPQPLGIYKPYLVDGKYLYLSGHGPVRDDKSLIIGRIGDDMD CCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCC IEEGKLAARQVGLTMLSTIVTNFGSLNKVKRVIKVLGMVNCSGDFLRHPYVINGCSELFA CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCCCEEECCHHHHHH EVWGQENGIGVRSAVGMGSLPDNIPVEVEAVFELF HHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA