Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146298429

Identifier: 146298429

GI number: 146298429

Start: 728488

End: 730065

Strand: Direct

Name: 146298429

Synonym: Fjoh_0666

Alternate gene names: NA

Gene position: 728488-730065 (Clockwise)

Preceding gene: 146298428

Following gene: 146298430

Centisome position: 11.95

GC content: 36.95

Gene sequence:

>1578_bases
ATGTCAAATTTTAAACTCGTTTTATCTCTAATTTTTAAATTAAAAGACATGAAAAAGTTAACCATATTATATATCACAGG
AATACTTTTAGGAAGTATGACATCCTGTACCAAGGATTTTGAGGAAATTAATAAGAACCCAAATTCAGTAGATAAACCAA
ATCCGAATTTTGTTTTCAGTAAAGCACAACTTGACGGATTAAACAATAATTATTTCTTTACCAATATTCTGGAATGCGGC
GGCTTATTGCAGCATTATGCTACTTATAAAGAAGCTTCTGGGGTTGGAGATAAATATTTAAGCAACGAAGTATATTTCTC
GGCTTATTTCAATCAGGCGTACCCAACTGGTATAAATGAAACACAAATTGTAATCGATGCTTTAAAAAACAGTCCAAACG
ACAGTAACCGACTTAATATTGCCAGAATCTGGAAAGTATATTTGTATCATAAATTAACTGATTTATACGGAGACATCCCG
TATTCTGAAGCAGCGAAAGCTAACAGCACACAAGTTTTTCTTCCAAAATATGATTCTCAGGAATTTATCTATAAAGACTT
ATTAAAAGAATTAGATGAAGCTGCTGCAGGATTAGATCCGGCAAAACCAAGTTTCGGAAAATCTGATTTTATTTATGACG
GAGATGTAACGAAGTGGAAAAAATTCTCGTACTCTTTAATGCTTCGTCTGGGTTTAAGATTATCTAAAGTAGATCCTGCC
CTATCTCAATCATGGGTTACCAAAGCGATTGCCGGCGGCGTAATTTTAAACGGAACAGATAATGCAATCATGAAATATAC
TGACGGGCCAAATGATTTTAATCGAAATCCGGTTGGTTTTGATGCCCGAAGACAAGATTTTACAGCGGGGTCTTTTGGAC
AAAAAAATGTTGAAGGCGGTAAACTGGCTAAAACATTTATCGATTTGCTGCAATCAACTGCCGATCCTCGAATCAGCGTT
TATGCAGGAGTTTGGCAGGGAGGCTCACAAAACACAAGTCTTGCCATTCAAAAAGGTTTTCCTAACGGAACTAAAACAGC
TCCAAGTGCGGCAGAACAAGGAACGTATTCTGAACCCAACCAAAGTACCGTTTTTAAATATGATGCACCGCTTGTACTTA
TCAGCAATGCCGAAACCAATTTATATTTAGCGGAAGCTGCAGCAAGAGGCTGGTACACCAATGAAACGGATAAAGATTTA
TATGAAAAAGGTGTAAAAGCTTCTTTCTTAAACATGGGAATTTATGGTGCTGCTTATGCTATTCCGGACGCAGCAGTATA
TTTAACCGCAAATCCGTATAATGCCGCAGGAAGTTTTGAAGCCAAAATGAACCAGATTCATACGCAGATTTACATCGCAT
TATTTGTAGACGAACAAGAAATTTATGCCAATTGGAGAAGAACCGGATACCCAGTTTTAACTCCTGTAAATTTCCCTGGA
AACGTTACAAATGGCACAATACCAAGACGTTTAAAATATCCAACCAGCGAATATTCAGTGAATTCAGCTAACTTAGCAGA
AGCAGTTAAGCGTCAGGGCGAAGATGCTTTTACAACAAGAATCTGGTGGGATAAATAA

Upstream 100 bases:

>100_bases
ACACCAAACGTAGATCCAGAATCTGTATTCAGCGCAGGAAATGCTCAGGGTGTAGAACAATTTGGAGTGCCAAAAACCAG
AAGTTTCGGTTTAAGTTTAA

Downstream 100 bases:

>100_bases
AAATAATAACCGTTGCCGTAATTAAACACATAGAGACATAGTTTTTGAAAGTGTTGAAAGGCGTTTCACTTGCATTAACA
TACATAGCATCTATGTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MSNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFSKAQLDGLNNNYFFTNILECG
GLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINETQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIP
YSEAAKANSTQVFLPKYDSQEFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA
LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGGKLAKTFIDLLQSTADPRISV
YAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPNQSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDL
YEKGVKASFLNMGIYGAAYAIPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG
NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK

Sequences:

>Translated_525_residues
MSNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFSKAQLDGLNNNYFFTNILECG
GLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINETQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIP
YSEAAKANSTQVFLPKYDSQEFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA
LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGGKLAKTFIDLLQSTADPRISV
YAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPNQSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDL
YEKGVKASFLNMGIYGAAYAIPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG
NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK
>Mature_524_residues
SNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFSKAQLDGLNNNYFFTNILECGG
LLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINETQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIPY
SEAAKANSTQVFLPKYDSQEFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPAL
SQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGGKLAKTFIDLLQSTADPRISVY
AGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPNQSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDLY
EKGVKASFLNMGIYGAAYAIPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPGN
VTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58444; Mature: 58313

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
KAQLDGLNNNYFFTNILECGGLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINE
EHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCCCCC
TQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIPYSEAAKANSTQVFLPKYDSQ
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCH
EFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHCCHH
LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGG
HHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
KLAKTFIDLLQSTADPRISVYAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPN
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCC
QSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDLYEKGVKASFLNMGIYGAAYA
CCEEEEECCCEEEEECCCCCEEEEEHHHCCCCCCCCCHHHHHCCCHHHHHHCCHHHHHEE
IPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG
CCCEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEEECCHHHHHHHHHCCCCEEEECCCCC
NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK
CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
SNFKLVLSLIFKLKDMKKLTILYITGILLGSMTSCTKDFEEINKNPNSVDKPNPNFVFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
KAQLDGLNNNYFFTNILECGGLLQHYATYKEASGVGDKYLSNEVYFSAYFNQAYPTGINE
EHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCCCCC
TQIVIDALKNSPNDSNRLNIARIWKVYLYHKLTDLYGDIPYSEAAKANSTQVFLPKYDSQ
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCH
EFIYKDLLKELDEAAAGLDPAKPSFGKSDFIYDGDVTKWKKFSYSLMLRLGLRLSKVDPA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHCCHH
LSQSWVTKAIAGGVILNGTDNAIMKYTDGPNDFNRNPVGFDARRQDFTAGSFGQKNVEGG
HHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
KLAKTFIDLLQSTADPRISVYAGVWQGGSQNTSLAIQKGFPNGTKTAPSAAEQGTYSEPN
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCC
QSTVFKYDAPLVLISNAETNLYLAEAAARGWYTNETDKDLYEKGVKASFLNMGIYGAAYA
CCEEEEECCCEEEEECCCCCEEEEEHHHCCCCCCCCCHHHHHCCCHHHHHHCCHHHHHEE
IPDAAVYLTANPYNAAGSFEAKMNQIHTQIYIALFVDEQEIYANWRRTGYPVLTPVNFPG
CCCEEEEEECCCCCCCCCHHHHHHHHEEEEEEEEEECCHHHHHHHHHCCCCEEEECCCCC
NVTNGTIPRRLKYPTSEYSVNSANLAEAVKRQGEDAFTTRIWWDK
CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA