| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298373
Identifier: 146298373
GI number: 146298373
Start: 673473
End: 674261
Strand: Direct
Name: 146298373
Synonym: Fjoh_0610
Alternate gene names: NA
Gene position: 673473-674261 (Clockwise)
Preceding gene: 146298370
Following gene: 146298374
Centisome position: 11.05
GC content: 33.97
Gene sequence:
>789_bases TTGAAAACAAAAGTATTATCCGGCTTTTTGCTGTTTTTTCTGAGCTTATTTCTTGTTTCTTTTTCAGATCCGTATGCCAT AAAACGCATCTCTGATGCGAACTTCAGATATGAATTTTTTACAACCGACAAAAAAGTAAAAGTAAAAGATAATAAAATAT ACTTTTGGTTCAAAGGCGGTACTATCCATAACGCCCAATCTGGTATTGCCGGAGCTCTGCTCGATGATAAATTTGTAAAA ATGTATCACAACAACCAATTAGCAGAACAAGGTCAGTTTGACGAAGGTCTAAAAGTAGGTCTTTGGAAAACCTGGCACTC AAACGGAATAATTGAGTCTACTCAAAAATGGAAAAAAGGCATTAAATGCGGCGAATACTTTCGTTACAATTCAAACGGTG ACCTTGTAGAAACTGGAAAATACAGTCAGGATCTAAAAACAGGAAAATGGGTCGACTTAGAAAAGAAAGACACACTTGTC TACAAAAAAGGTATTCTTTTAAGTAAACCGCAAAAAATCTCAAAATCTCAGGAGTACAAACTGAAAGAAGAACAGGAAAA ACTCGATAAATCTAGAAAAGAAGCCAAAGAACTTGAAATCATTCAGGATTCTAACACGCTTAATTCGTATAAAGAAGCAA CCAAACAAAGAGAAAAAGCCGAAAAGGAAAAACTAGAAAGAGAAAAGAAAGCTGAAAAAGACAAAAAAGCGGCCGAAAAA GCATCACAGCCAAAAAAAGATTCAAAAGTCAAATCTTTCTTTAAAAACCTGTTTTCAAAAAAGAAATAA
Upstream 100 bases:
>100_bases GTTTGATAACATATATTTATCCTTAAAAAACCTACAGATTTATTTGTAAAAGAATTTTAAAAGTTTATCTTGCTCCCGTT TTATTAAAAAAAATACCACA
Downstream 100 bases:
>100_bases ACTAATGATCAAAGCTCATAGTTTATTATACGCCATTTACATCTGCCTCATTGTATCTATCATTTGCGGTGCGCTGTTGT ATTTTTCTAATTTGTATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKTKVLSGFLLFFLSLFLVSFSDPYAIKRISDANFRYEFFTTDKKVKVKDNKIYFWFKGGTIHNAQSGIAGALLDDKFVK MYHNNQLAEQGQFDEGLKVGLWKTWHSNGIIESTQKWKKGIKCGEYFRYNSNGDLVETGKYSQDLKTGKWVDLEKKDTLV YKKGILLSKPQKISKSQEYKLKEEQEKLDKSRKEAKELEIIQDSNTLNSYKEATKQREKAEKEKLEREKKAEKDKKAAEK ASQPKKDSKVKSFFKNLFSKKK
Sequences:
>Translated_262_residues MKTKVLSGFLLFFLSLFLVSFSDPYAIKRISDANFRYEFFTTDKKVKVKDNKIYFWFKGGTIHNAQSGIAGALLDDKFVK MYHNNQLAEQGQFDEGLKVGLWKTWHSNGIIESTQKWKKGIKCGEYFRYNSNGDLVETGKYSQDLKTGKWVDLEKKDTLV YKKGILLSKPQKISKSQEYKLKEEQEKLDKSRKEAKELEIIQDSNTLNSYKEATKQREKAEKEKLEREKKAEKDKKAAEK ASQPKKDSKVKSFFKNLFSKKK >Mature_262_residues MKTKVLSGFLLFFLSLFLVSFSDPYAIKRISDANFRYEFFTTDKKVKVKDNKIYFWFKGGTIHNAQSGIAGALLDDKFVK MYHNNQLAEQGQFDEGLKVGLWKTWHSNGIIESTQKWKKGIKCGEYFRYNSNGDLVETGKYSQDLKTGKWVDLEKKDTLV YKKGILLSKPQKISKSQEYKLKEEQEKLDKSRKEAKELEIIQDSNTLNSYKEATKQREKAEKEKLEREKKAEKDKKAAEK ASQPKKDSKVKSFFKNLFSKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30551; Mature: 30551
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKVLSGFLLFFLSLFLVSFSDPYAIKRISDANFRYEFFTTDKKVKVKDNKIYFWFKGG CCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEEEEEECCCEEEEECCEEEEEEECC TIHNAQSGIAGALLDDKFVKMYHNNQLAEQGQFDEGLKVGLWKTWHSNGIIESTQKWKKG EEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHC IKCGEYFRYNSNGDLVETGKYSQDLKTGKWVDLEKKDTLVYKKGILLSKPQKISKSQEYK CCCCCCEEECCCCCEEECCCCHHHCCCCCEECCCCCCCEEEECCCCCCCCHHHCCCHHHH LKEEQEKLDKSRKEAKELEIIQDSNTLNSYKEATKQREKAEKEKLEREKKAEKDKKAAEK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQPKKDSKVKSFFKNLFSKKK HCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTKVLSGFLLFFLSLFLVSFSDPYAIKRISDANFRYEFFTTDKKVKVKDNKIYFWFKGG CCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEEEEEECCCEEEEECCEEEEEEECC TIHNAQSGIAGALLDDKFVKMYHNNQLAEQGQFDEGLKVGLWKTWHSNGIIESTQKWKKG EEECCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHC IKCGEYFRYNSNGDLVETGKYSQDLKTGKWVDLEKKDTLVYKKGILLSKPQKISKSQEYK CCCCCCEEECCCCCEEECCCCHHHCCCCCEECCCCCCCEEEECCCCCCCCHHHCCCHHHH LKEEQEKLDKSRKEAKELEIIQDSNTLNSYKEATKQREKAEKEKLEREKKAEKDKKAAEK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASQPKKDSKVKSFFKNLFSKKK HCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA