| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298370
Identifier: 146298370
GI number: 146298370
Start: 669701
End: 670273
Strand: Direct
Name: 146298370
Synonym: Fjoh_0607
Alternate gene names: NA
Gene position: 669701-670273 (Clockwise)
Preceding gene: 146298369
Following gene: 146298373
Centisome position: 10.98
GC content: 23.04
Gene sequence:
>573_bases ATGAAGAACAAAAAAAACTTAATCTGGGGAATTAGCGCGTTATTAATTATTAATTGCATTTTATTACTTAAGAATTGTAA TCAAAAGCAATTAATAGAAGTAAAAGATAAAAAGATTGATAAAACTATAGATAAAAAAGTACTTTTTACAGGAGAATTTA ATGATGTTGGTAGCCCAATAAATTTCTGGGATTTCTATGGTGATAATGGAGAATCAATTTTAAGTTTGATTTTCTATAAA AATGACAAAAACGAATTTGATTATGAAATTAAGCAAAAAAACTCTTTGGGAAAAATTGTATATAGTGCTGAAATGAGAAA TGGGAAAGTTTTAAAAGAATTTGATTATGAAATTTTACAAAATATAAATATAGATAATGGCAGATTTATGTACGAAAATT ATTGCGTAAATTGCCATAATTACAAAAAAGAAGGAGTATCAAAACCTTTACTAAAGCTTAAAAATATTGAAGTTTCTAAA TTTATCAAAAAATATAAAAATGTTTCCCATGAAAATGTTCCAAAACTAAATGACAATGAACTGAAATCTGTTATTTTATT TATTAATAAATAG
Upstream 100 bases:
>100_bases GCATCAATATTAAATGACATTTTTACAAATTTTAGAATTGATCTATATAATAAGAAAAAATCAGGTAAAGAACAGACAGA TAGTACTAAATCACAAGTAA
Downstream 100 bases:
>100_bases CCTCTAATTGTCAAGATCGTCTCACTAGTGGCTACAAAGAAAAAAAGAAAACCTCTCAACTATCTGAGGTTTTCTTTTTC ATTTTTAAGTGAAAGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKNKKNLIWGISALLIINCILLLKNCNQKQLIEVKDKKIDKTIDKKVLFTGEFNDVGSPINFWDFYGDNGESILSLIFYK NDKNEFDYEIKQKNSLGKIVYSAEMRNGKVLKEFDYEILQNINIDNGRFMYENYCVNCHNYKKEGVSKPLLKLKNIEVSK FIKKYKNVSHENVPKLNDNELKSVILFINK
Sequences:
>Translated_190_residues MKNKKNLIWGISALLIINCILLLKNCNQKQLIEVKDKKIDKTIDKKVLFTGEFNDVGSPINFWDFYGDNGESILSLIFYK NDKNEFDYEIKQKNSLGKIVYSAEMRNGKVLKEFDYEILQNINIDNGRFMYENYCVNCHNYKKEGVSKPLLKLKNIEVSK FIKKYKNVSHENVPKLNDNELKSVILFINK >Mature_190_residues MKNKKNLIWGISALLIINCILLLKNCNQKQLIEVKDKKIDKTIDKKVLFTGEFNDVGSPINFWDFYGDNGESILSLIFYK NDKNEFDYEIKQKNSLGKIVYSAEMRNGKVLKEFDYEILQNINIDNGRFMYENYCVNCHNYKKEGVSKPLLKLKNIEVSK FIKKYKNVSHENVPKLNDNELKSVILFINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22288; Mature: 22288
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKKNLIWGISALLIINCILLLKNCNQKQLIEVKDKKIDKTIDKKVLFTGEFNDVGSPI CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHCCEEEEEECCCCCCCCC NFWDFYGDNGESILSLIFYKNDKNEFDYEIKQKNSLGKIVYSAEMRNGKVLKEFDYEILQ CEEEEECCCHHHEEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHH NINIDNGRFMYENYCVNCHNYKKEGVSKPLLKLKNIEVSKFIKKYKNVSHENVPKLNDNE HCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC LKSVILFINK CEEEEEEEEC >Mature Secondary Structure MKNKKNLIWGISALLIINCILLLKNCNQKQLIEVKDKKIDKTIDKKVLFTGEFNDVGSPI CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHCCEEEEEECCCCCCCCC NFWDFYGDNGESILSLIFYKNDKNEFDYEIKQKNSLGKIVYSAEMRNGKVLKEFDYEILQ CEEEEECCCHHHEEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHH NINIDNGRFMYENYCVNCHNYKKEGVSKPLLKLKNIEVSKFIKKYKNVSHENVPKLNDNE HCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC LKSVILFINK CEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA