Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

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The map label for this gene is 146284436

Identifier: 146284436

GI number: 146284436

Start: 4478201

End: 4480225

Strand: Direct

Name: 146284436

Synonym: PST_4125

Alternate gene names: NA

Gene position: 4478201-4480225 (Clockwise)

Preceding gene: 146284435

Following gene: 146284437

Centisome position: 98.05

GC content: 65.53

Gene sequence:

>2025_bases
ATGAGCGAAAGCCAAGGGCTGCACGCCAGTCCCAGCGAATGGCCGAGGGCGCTGTTCTACGTCGCCCTGCTGTTCTCCAT
CTATCAGATCGTCACCGCCGCCTTTCACCCGGTGTCCAGCCAGGTGCTGCGCGCCGGTCACGTCGGCTTCCTGTTGCTGC
TGGTGTTCCTTTGCTACCCGGCCCGCGGCAACGGCAAGCCGTTCCAGCCCGTGGCCTGGCTGCTTGGGCTGGCCGGTTTC
GCCACCTTCATCTACCAGTGGTATTTCGAGGCGGACCTGATCCAGCGCTCCGGCGACATGACCAGCACCGACATGGTGGT
CGGCCTGACGCTGATTGTGCTGGTGTTCGAGGCCGCGCGCCGGGTCATGGGTATCGCCCTGCCGATCATCTGCGGGCTGT
TCCTCGCCTACGGCCTGCTCGGCGAATACCTGCCCGGTGATCTCGCGCACCGCGGCTATTACCTGGACCAGATCGTCAAC
CAGCTGTCGTTCGGCACCGAAGGCCTGTACGGCACGCCGACCTACGTTTCGGCGACCTACATCTTCCTCTTCATCCTGTT
CGGCTCGTTCCTCGAGCAGGCGGGAATGATCAAACTATTCACCGACTTCGCCATGGGTCTGTTCGGCCACAAGCTCGGGG
GCCCGGCTAAGGTCTCGGTGGTGTCCTCGGCGTTGATGGGCACCATCACCGGTTCCGGTGTGGCCAACGTGGTCACCACC
GGCCAGTTCACCATCCCGCTGATGAAGCGCTTCGGTTATCGCCCGGCCTTCGCCGGTGGCGTCGAGGCCACCTCGTCGAT
GGGCAGCCAGATCATGCCGCCGGTGATGGGCGCGGTAGCGTTCATCATGGCCGAAACCATCAACGTGCCCTTCGTCGAGA
TCGCCAAGGCCGCGCTGATCCCCGCGCTGCTGTACTTCGGCTCGGTGTTCTGGATGGTCCATCTGGAAGCCAAGCGCGCC
GGCCTCAAGGGCCTGCCGAAGGACGAGTGCCCGAGTGCCTGGGCCGCAGTGAAGGAGCGCTGGTACCTGCTGATCCCGCT
GCTGGTGCTGGTCTGGCTGCTGTTCTCCGGACGCACGCCGATGTTCGCCGGCACCATCGGCCTGGCGCTGACGGCGATCG
TCATCCTCGGCTCGGCGATCATCCTCAAGGTGTCGTCGTTCGGCCTGCGCATCGCCTTCTGGATCGCCCTCGGCCTGCTC
TGCGCCGGGTTCTTCCAGCTCGGCATCGGGGTGATCTTCGGCGTCATCGCCGCGCTGGTGGCCGTGTGCTGGTTCATCAA
GGGCGGCCGCGACACCCTGACCATCTGCCTGCACGCGCTGGTCGAAGGCGCGCGCCATGCGGTGCCGGTGGGTATCGCCT
GTGCCCTGGTGGGCGTGATCATCGGCATCGTTTCGCTGACTGGCGTGGCCTCGACCTTCGCCGGCTACATCCTCGCGGTC
GGCGAGAACAACCTGTTCCTTTCGCTGATCCTGACCATGCTGACCTGCCTGGTGCTGGGCATGGGCATCCCGACCATTCC
CAACTACATCATCACCAGCTCGATCGCCGCACCCGCGCTGCTGGATCTCGGCGTGCCGCTGATCGTCTCGCACATGTTCG
TCTTCTACTTCGGCATCATGGCCGACCTGACTCCGCCGGTGGCGCTGGCCTGCTTCGCTGCCGCGCCGATCGCCAAGGAG
AAGGGCCTGAAGATCAGCATGTGGGCCATCCGCATCGCCATCGCCGGTTTCATCGTGCCGTTCATGGCGGTGTACAACCC
GGCGCTGATGATGCAGGGCGGAGACTGGGGCGCCACGCTGTACATGCTGTTCAAGGCGGCGTTCGCCATCGGCCTGTGGG
GCGCGGTGTTCACCGGCTACCTGCAGCGGCCCATGGCGCTGTGGGAGAAAGTGCTGGGCTTCGTCGCCGGTGCGGCGATG
ATCCTCGCCACGCCGATGAGTGACGAGATCGGCTTCGCCCTCGGCGCGATCTTCCTCGCTCAGCACATCTGGCGCGCCCG
TCGCGCCGAGCCGGCGGCGGCGTGA

Upstream 100 bases:

>100_bases
CCTGCTCCAGCCCGCATCCTTGTAGCAGCAGGCTTGCCCGCGTTGCCTCGTTGGCAAGCCTGCTTCTACAGGCCCCACCT
TGCAGTGAGAGAGTGATTCC

Downstream 100 bases:

>100_bases
TCGGTCTGTGCCTGGGGCTGGCAGGCGTGGTGTGGGCCGAAGTGCCCACCCCCGCCTTCACCCTGGCGTGGAACCACACC
ATCGAGAAGATCCGCTGGGA

Product: transporter, putative

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; C4-Dicarboxylate Anaerobic Carrier; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP-Type Transport System Permease Protein; TRAP-Type Transporter Fused Permease Components; TRAP Transporter Large Permease; TRAP Transport System Permease Component; TRAP-Type Transporter Fused Permeases; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; Inner Membrane Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System

Number of amino acids: Translated: 674; Mature: 673

Protein sequence:

>674_residues
MSESQGLHASPSEWPRALFYVALLFSIYQIVTAAFHPVSSQVLRAGHVGFLLLLVFLCYPARGNGKPFQPVAWLLGLAGF
ATFIYQWYFEADLIQRSGDMTSTDMVVGLTLIVLVFEAARRVMGIALPIICGLFLAYGLLGEYLPGDLAHRGYYLDQIVN
QLSFGTEGLYGTPTYVSATYIFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTT
GQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPALLYFGSVFWMVHLEAKRA
GLKGLPKDECPSAWAAVKERWYLLIPLLVLVWLLFSGRTPMFAGTIGLALTAIVILGSAIILKVSSFGLRIAFWIALGLL
CAGFFQLGIGVIFGVIAALVAVCWFIKGGRDTLTICLHALVEGARHAVPVGIACALVGVIIGIVSLTGVASTFAGYILAV
GENNLFLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPLIVSHMFVFYFGIMADLTPPVALACFAAAPIAKE
KGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGATLYMLFKAAFAIGLWGAVFTGYLQRPMALWEKVLGFVAGAAM
ILATPMSDEIGFALGAIFLAQHIWRARRAEPAAA

Sequences:

>Translated_674_residues
MSESQGLHASPSEWPRALFYVALLFSIYQIVTAAFHPVSSQVLRAGHVGFLLLLVFLCYPARGNGKPFQPVAWLLGLAGF
ATFIYQWYFEADLIQRSGDMTSTDMVVGLTLIVLVFEAARRVMGIALPIICGLFLAYGLLGEYLPGDLAHRGYYLDQIVN
QLSFGTEGLYGTPTYVSATYIFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTT
GQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPALLYFGSVFWMVHLEAKRA
GLKGLPKDECPSAWAAVKERWYLLIPLLVLVWLLFSGRTPMFAGTIGLALTAIVILGSAIILKVSSFGLRIAFWIALGLL
CAGFFQLGIGVIFGVIAALVAVCWFIKGGRDTLTICLHALVEGARHAVPVGIACALVGVIIGIVSLTGVASTFAGYILAV
GENNLFLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPLIVSHMFVFYFGIMADLTPPVALACFAAAPIAKE
KGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGATLYMLFKAAFAIGLWGAVFTGYLQRPMALWEKVLGFVAGAAM
ILATPMSDEIGFALGAIFLAQHIWRARRAEPAAA
>Mature_673_residues
SESQGLHASPSEWPRALFYVALLFSIYQIVTAAFHPVSSQVLRAGHVGFLLLLVFLCYPARGNGKPFQPVAWLLGLAGFA
TFIYQWYFEADLIQRSGDMTSTDMVVGLTLIVLVFEAARRVMGIALPIICGLFLAYGLLGEYLPGDLAHRGYYLDQIVNQ
LSFGTEGLYGTPTYVSATYIFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTTG
QFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPALLYFGSVFWMVHLEAKRAG
LKGLPKDECPSAWAAVKERWYLLIPLLVLVWLLFSGRTPMFAGTIGLALTAIVILGSAIILKVSSFGLRIAFWIALGLLC
AGFFQLGIGVIFGVIAALVAVCWFIKGGRDTLTICLHALVEGARHAVPVGIACALVGVIIGIVSLTGVASTFAGYILAVG
ENNLFLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPLIVSHMFVFYFGIMADLTPPVALACFAAAPIAKEK
GLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGATLYMLFKAAFAIGLWGAVFTGYLQRPMALWEKVLGFVAGAAMI
LATPMSDEIGFALGAIFLAQHIWRARRAEPAAA

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72067; Mature: 71936

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCC
>Mature Secondary Structure 
SESQGLHASPSEWPRALFYVALLFSIYQIVTAAFHPVSSQVLRAGHVGFLLLLVFLCYP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHCC
ARGNGKPFQPVAWLLGLAGFATFIYQWYFEADLIQRSGDMTSTDMVVGLTLIVLVFEAAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RVMGIALPIICGLFLAYGLLGEYLPGDLAHRGYYLDQIVNQLSFGTEGLYGTPTYVSATY
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
IFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVTT
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCC
GQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALI
CCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PALLYFGSVFWMVHLEAKRAGLKGLPKDECPSAWAAVKERWYLLIPLLVLVWLLFSGRTP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MFAGTIGLALTAIVILGSAIILKVSSFGLRIAFWIALGLLCAGFFQLGIGVIFGVIAALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVCWFIKGGRDTLTICLHALVEGARHAVPVGIACALVGVIIGIVSLTGVASTFAGYILAV
HHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
GENNLFLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPLIVSHMFVFYFGIM
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ADLTPPVALACFAAAPIAKEKGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGATL
HHCCHHHHHHHHHHCCCHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHH
YMLFKAAFAIGLWGAVFTGYLQRPMALWEKVLGFVAGAAMILATPMSDEIGFALGAIFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QHIWRARRAEPAAA
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA