| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is bcsP31 [H]
Identifier: 146284435
GI number: 146284435
Start: 4477111
End: 4478064
Strand: Direct
Name: bcsP31 [H]
Synonym: PST_4124
Alternate gene names: 146284435
Gene position: 4477111-4478064 (Clockwise)
Preceding gene: 146284433
Following gene: 146284436
Centisome position: 98.02
GC content: 64.57
Gene sequence:
>954_bases ATGAGACTGACCAAACGCCTGGGCCTGCTCGCTGCCGCTGCGGCCTTCACTGCCAGCACCGCGGCCGTCGCTGCGCCGAC CTTCATCAACATCCTCACCGGCGGCACCAGCGGTGTGTACTACCCGATCGGCGTGGCCCTGTCGCAGCAGTACAACAAGA TCGACGGCGCCAAGACTTCCGTGCAAGCCACCAAGGCTTCGGTGGAAAACCTCAACCTGCTGCAGGCCGGCCGTGGCGAA CTGGCCTTCTCCCTGGGTGACTCGGTGGCCGATGCCTGGAACGGTGTCGAGGACGCCGGCTTCAAGGCCCCGCTCAAGCG CCTGCGCGCCATCGCCGGTACCTACAACAACTACATCCAGATCGTTGCCAGCGAAGAGTCCGGCATCAAGACCCTGGAAG ACCTCAAGGGCAAGCGCATCTCCGTCGGCGCGCCGAAGTCCGGCACCGAGCTGAACGCCCGCGCGATCTTCAAGGCCGCC GGCCTGAGCTACGAGGACATGGGCCGCGTCGAATTCCTGCCCTACGCCGAGTCGGTCGAGCTGATCAAGAACCGCCAGCT GGACGCCACCCTGCAGTCCTCGGGCCTGGGCATGGCCGCTATCCGCGACCTGGCCAGCACCATGCCGGTGACCTTCGTCG AGATTCCGGCCGCCGTGGTCGAGAAGATCGAGAGCGACGCCTACCAGGCCGGCGTGATTCCGGCCGGCACCTACGACGGT CAGGATGCCGACGTACCGACCGTGGCCATCACCAACATTCTGGTCAGCCATGAGAAGGTTTCCGACGAAGTGGCCTACCA GATGACCAAGCTGATGTTCGACAACCTGTCGGCCCTGGGCAACGCCCATTCCGCCGCCAAGGACATCAAGCTGGAAAACG CCACCAAGAACCTGCCGATCCCGCTGCACCCGGGCGCCGAGCGCTTCTACAAGGAAGCCGGGGTTCTCAAGTAA
Upstream 100 bases:
>100_bases CCATCGCCCCTCTGCTTGCTCGTCTGGCGCGTTCCCGAACGCGGCATCGTCTATCGTCAACATGCTGCGTCAACCAATAA AAACGAAACGGAGATCCACC
Downstream 100 bases:
>100_bases CCCAGCGCTGACAGACGGGCGGAGCGGGCCCTGCGGCCTGCTCCAGCCCGCATCCTTGTAGCAGCAGGCTTGCCCGCGTT GCCTCGTTGGCAAGCCTGCT
Product: periplasmic binding protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRLTKRLGLLAAAAAFTASTAAVAAPTFINILTGGTSGVYYPIGVALSQQYNKIDGAKTSVQATKASVENLNLLQAGRGE LAFSLGDSVADAWNGVEDAGFKAPLKRLRAIAGTYNNYIQIVASEESGIKTLEDLKGKRISVGAPKSGTELNARAIFKAA GLSYEDMGRVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAAVVEKIESDAYQAGVIPAGTYDG QDADVPTVAITNILVSHEKVSDEVAYQMTKLMFDNLSALGNAHSAAKDIKLENATKNLPIPLHPGAERFYKEAGVLK
Sequences:
>Translated_317_residues MRLTKRLGLLAAAAAFTASTAAVAAPTFINILTGGTSGVYYPIGVALSQQYNKIDGAKTSVQATKASVENLNLLQAGRGE LAFSLGDSVADAWNGVEDAGFKAPLKRLRAIAGTYNNYIQIVASEESGIKTLEDLKGKRISVGAPKSGTELNARAIFKAA GLSYEDMGRVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAAVVEKIESDAYQAGVIPAGTYDG QDADVPTVAITNILVSHEKVSDEVAYQMTKLMFDNLSALGNAHSAAKDIKLENATKNLPIPLHPGAERFYKEAGVLK >Mature_317_residues MRLTKRLGLLAAAAAFTASTAAVAAPTFINILTGGTSGVYYPIGVALSQQYNKIDGAKTSVQATKASVENLNLLQAGRGE LAFSLGDSVADAWNGVEDAGFKAPLKRLRAIAGTYNNYIQIVASEESGIKTLEDLKGKRISVGAPKSGTELNARAIFKAA GLSYEDMGRVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAAVVEKIESDAYQAGVIPAGTYDG QDADVPTVAITNILVSHEKVSDEVAYQMTKLMFDNLSALGNAHSAAKDIKLENATKNLPIPLHPGAERFYKEAGVLK
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33512; Mature: 33512
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTKRLGLLAAAAAFTASTAAVAAPTFINILTGGTSGVYYPIGVALSQQYNKIDGAKTS CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCCCHHH VQATKASVENLNLLQAGRGELAFSLGDSVADAWNGVEDAGFKAPLKRLRAIAGTYNNYIQ HHHHHHHHHHCHHHHCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEE IVASEESGIKTLEDLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGRVEFLPYAESVE EEECCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCEEECCCHHHHH LIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAAVVEKIESDAYQAGVIPAGTYDG HHHCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC QDADVPTVAITNILVSHEKVSDEVAYQMTKLMFDNLSALGNAHSAAKDIKLENATKNLPI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEECCCCCCCCC PLHPGAERFYKEAGVLK CCCCCHHHHHHHHCCCC >Mature Secondary Structure MRLTKRLGLLAAAAAFTASTAAVAAPTFINILTGGTSGVYYPIGVALSQQYNKIDGAKTS CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCCCHHH VQATKASVENLNLLQAGRGELAFSLGDSVADAWNGVEDAGFKAPLKRLRAIAGTYNNYIQ HHHHHHHHHHCHHHHCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEE IVASEESGIKTLEDLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGRVEFLPYAESVE EEECCCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCEEECCCHHHHH LIKNRQLDATLQSSGLGMAAIRDLASTMPVTFVEIPAAVVEKIESDAYQAGVIPAGTYDG HHHCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC QDADVPTVAITNILVSHEKVSDEVAYQMTKLMFDNLSALGNAHSAAKDIKLENATKNLPI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCEECCCCCCCCC PLHPGAERFYKEAGVLK CCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]