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The map label for this gene is ctpA [H]

Identifier: 146284394

GI number: 146284394

Start: 4437297

End: 4438619

Strand: Direct

Name: ctpA [H]

Synonym: PST_4082

Alternate gene names: 146284394

Gene position: 4437297-4438619 (Clockwise)

Preceding gene: 146284393

Following gene: 146284395

Centisome position: 97.15

GC content: 65.38

Gene sequence:

>1323_bases
ATGTTGCACCTGCGCCGTTTCGCCCGCCCGTCCACGCTCGCCCTGGCCATCCTGCTAGGCATGCAAGGCGGTGCCTGGGC
CCAGCAGCCTCCGGCGGAAGCGGCTGCAGTACCAAGTTCCAAGGCACCGCTGCCGCTGGACGAGCTGCGCACCTTCGCCG
AGGTCCTGGACCGCATCAAGGCGGCCTATGTCGAGCCGGTGGATGACAAGACCCTGCTAGAAAACGCCATCAAGGGCATG
CTCAGCAACCTCGATCCGCACTCGGCCTATCTCGAGCCAGAAGCCTTTGCCGAGCTGCAGGAAAGCACCAGCGGCGAATT
CGGCGGGCTGGGCATCGAGGTCGGCATGGAGGACGGCTTCATCAAGGTGGTGTCGCCGATCGACGATACGCCGGCATCCA
AGGCCGGCATCGAAGCCGGCGACCTGATCGTCAAGATCGACGGGCAGCCGACCAAGGGTCTGTCGATGATGGACGCCATC
GCCAAGATGCGCGGCAAACCCGGCAGCACCATCAGCCTGACGCTGGTACGCGAAGGCGGCCAGCCGTTCGACGTCAAGCT
GACCCGTGCGGTGATCAAGGTGCGCAGCGTGAAGAGCCAGCTGCTGGAGCCCGGTTACGGGTACCTGCGTGTCACCCAGT
TCCAGGTCAACTCCGGCGAGGAGGTCGGCAAGGCGCTGGCCAAGCTGAAGAAGGACAATGGCGGCAAGAAGCTCAACGGC
CTGGTGCTGGACCTGCGCAACAACCCCGGCGGCGTGCTGCAGGCCGCGGTGGAGATTTCCGATCACTTCCTCACCAAGGG
CCTGATCGTCTACACCAAGGGCCGCATCGCCAATTCCGAGCTGCGCTTCAACGCCGATACGGCCGATGCCAGCGAAGGGG
TGCCGCTGGTCGTGCTGATCAATGGCGGTAGCGCCTCGGCCTCGGAGATCGTGGCCGGCGCCCTGCAGGATCACAAGCGG
GCGGTGGTCATGGGCACCGACAGCTTCGGCAAGGGCTCGGTGCAGACCGTGCTGCCGCTGAACAACGATCGCGCGCTCAA
GCTCACCACGGCGCTCTACTACACGCCCAAGGGCCGCTCGATCCAGGCCCAGGGCATCGAGCCGGATATCGTCGTCGAAC
GTGCCAAGCTGACCCGCGAACAGGCTGCCGAAGGCTTCCGCGAAGCGGATCTGGCCGGGCATCTGGGCAATGGCAACGGC
GGCCCGGATCGGCCAACCAGCACGCAGATCGCCAGCGACTCGGATCGGCCGCAGGACGATGACTACCAGCTCGGTCAGGC
GCTGAACCTGCTCAAGGGATTGAACCTCACCCGCGGCCAATGA

Upstream 100 bases:

>100_bases
CTGCCCAATGGTGCCGCGCGCAAGGTTGACCGATGGCGGCATTCGGCCCCGCCGAGCCACCCGGTCCACCTGGCGTGCCC
TCTCATTACTGGAGTTCGAC

Downstream 100 bases:

>100_bases
GCATGCCGCGCTGGACGGCCGGCCTGGCGCTGCTCCTGGCGCTGGCCGGGCAGCCAGGGTTTGCAGACGAAGCCGATGCA
GACCGGCGCGTCGCCGCGCG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MLHLRRFARPSTLALAILLGMQGGAWAQQPPAEAAAVPSSKAPLPLDELRTFAEVLDRIKAAYVEPVDDKTLLENAIKGM
LSNLDPHSAYLEPEAFAELQESTSGEFGGLGIEVGMEDGFIKVVSPIDDTPASKAGIEAGDLIVKIDGQPTKGLSMMDAI
AKMRGKPGSTISLTLVREGGQPFDVKLTRAVIKVRSVKSQLLEPGYGYLRVTQFQVNSGEEVGKALAKLKKDNGGKKLNG
LVLDLRNNPGGVLQAAVEISDHFLTKGLIVYTKGRIANSELRFNADTADASEGVPLVVLINGGSASASEIVAGALQDHKR
AVVMGTDSFGKGSVQTVLPLNNDRALKLTTALYYTPKGRSIQAQGIEPDIVVERAKLTREQAAEGFREADLAGHLGNGNG
GPDRPTSTQIASDSDRPQDDDYQLGQALNLLKGLNLTRGQ

Sequences:

>Translated_440_residues
MLHLRRFARPSTLALAILLGMQGGAWAQQPPAEAAAVPSSKAPLPLDELRTFAEVLDRIKAAYVEPVDDKTLLENAIKGM
LSNLDPHSAYLEPEAFAELQESTSGEFGGLGIEVGMEDGFIKVVSPIDDTPASKAGIEAGDLIVKIDGQPTKGLSMMDAI
AKMRGKPGSTISLTLVREGGQPFDVKLTRAVIKVRSVKSQLLEPGYGYLRVTQFQVNSGEEVGKALAKLKKDNGGKKLNG
LVLDLRNNPGGVLQAAVEISDHFLTKGLIVYTKGRIANSELRFNADTADASEGVPLVVLINGGSASASEIVAGALQDHKR
AVVMGTDSFGKGSVQTVLPLNNDRALKLTTALYYTPKGRSIQAQGIEPDIVVERAKLTREQAAEGFREADLAGHLGNGNG
GPDRPTSTQIASDSDRPQDDDYQLGQALNLLKGLNLTRGQ
>Mature_440_residues
MLHLRRFARPSTLALAILLGMQGGAWAQQPPAEAAAVPSSKAPLPLDELRTFAEVLDRIKAAYVEPVDDKTLLENAIKGM
LSNLDPHSAYLEPEAFAELQESTSGEFGGLGIEVGMEDGFIKVVSPIDDTPASKAGIEAGDLIVKIDGQPTKGLSMMDAI
AKMRGKPGSTISLTLVREGGQPFDVKLTRAVIKVRSVKSQLLEPGYGYLRVTQFQVNSGEEVGKALAKLKKDNGGKKLNG
LVLDLRNNPGGVLQAAVEISDHFLTKGLIVYTKGRIANSELRFNADTADASEGVPLVVLINGGSASASEIVAGALQDHKR
AVVMGTDSFGKGSVQTVLPLNNDRALKLTTALYYTPKGRSIQAQGIEPDIVVERAKLTREQAAEGFREADLAGHLGNGNG
GPDRPTSTQIASDSDRPQDDDYQLGQALNLLKGLNLTRGQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=324, Percent_Identity=33.641975308642, Blast_Score=131, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 46724; Mature: 46724

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLRRFARPSTLALAILLGMQGGAWAQQPPAEAAAVPSSKAPLPLDELRTFAEVLDRIK
CCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AAYVEPVDDKTLLENAIKGMLSNLDPHSAYLEPEAFAELQESTSGEFGGLGIEVGMEDGF
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCE
IKVVSPIDDTPASKAGIEAGDLIVKIDGQPTKGLSMMDAIAKMRGKPGSTISLTLVREGG
EEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCC
QPFDVKLTRAVIKVRSVKSQLLEPGYGYLRVTQFQVNSGEEVGKALAKLKKDNGGKKLNG
CCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
LVLDLRNNPGGVLQAAVEISDHFLTKGLIVYTKGRIANSELRFNADTADASEGVPLVVLI
EEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCEECCEEEECCCCCCCCCCCEEEEEE
NGGSASASEIVAGALQDHKRAVVMGTDSFGKGSVQTVLPLNNDRALKLTTALYYTPKGRS
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCE
IQAQGIEPDIVVERAKLTREQAAEGFREADLAGHLGNGNGGPDRPTSTQIASDSDRPQDD
EEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DYQLGQALNLLKGLNLTRGQ
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLHLRRFARPSTLALAILLGMQGGAWAQQPPAEAAAVPSSKAPLPLDELRTFAEVLDRIK
CCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AAYVEPVDDKTLLENAIKGMLSNLDPHSAYLEPEAFAELQESTSGEFGGLGIEVGMEDGF
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCE
IKVVSPIDDTPASKAGIEAGDLIVKIDGQPTKGLSMMDAIAKMRGKPGSTISLTLVREGG
EEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCC
QPFDVKLTRAVIKVRSVKSQLLEPGYGYLRVTQFQVNSGEEVGKALAKLKKDNGGKKLNG
CCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEE
LVLDLRNNPGGVLQAAVEISDHFLTKGLIVYTKGRIANSELRFNADTADASEGVPLVVLI
EEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCEECCEEEECCCCCCCCCCCEEEEEE
NGGSASASEIVAGALQDHKRAVVMGTDSFGKGSVQTVLPLNNDRALKLTTALYYTPKGRS
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCE
IQAQGIEPDIVVERAKLTREQAAEGFREADLAGHLGNGNGGPDRPTSTQIASDSDRPQDD
EEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DYQLGQALNLLKGLNLTRGQ
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]