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The map label for this gene is yibP [H]

Identifier: 146284393

GI number: 146284393

Start: 4436152

End: 4437225

Strand: Direct

Name: yibP [H]

Synonym: PST_4081

Alternate gene names: 146284393

Gene position: 4436152-4437225 (Clockwise)

Preceding gene: 146284392

Following gene: 146284394

Centisome position: 97.13

GC content: 66.2

Gene sequence:

>1074_bases
ATGGGCCAGCTGGAAAAGCAGGTCGACACCCTGCAGCAGGAAATCGACCGCAGCGAGGCCGAGCTGGAGCGCCTGAACGA
GGAGAAGACCACCCTCGAAGGTGCTCGCCTGGAACAGCAGCGCCTGATCGGCCTGCAGGCCCGCGCCGCCTATCAGAACG
GTCGCCAGGAATACCTCAAGCTGCTGCTCAATCAGCAGAACCCGGAAAAATTCAGTCGCACCCTCACCTATTACGACTAT
CTCAACAAGGCCCGCCTCGAGCAGCTCGACAGCTTCAACGAGACACTGCGCCAGCTGGCCAACGTCGAGGCCGACATCGA
AGCGCAGCAGAACCTGCTCGCCGAGAAGAAGGACGGCCTGCTGGAGCGCCGCGATCAGCTGGCCGAAGTGCGCAAGGAGC
GCCAGCAGGCACTGGCCAAGCTGAACAGCGACCTGTCCAGCCGAGAGCAGCGGCTGCAGGCTCGCCGCCAGGAACAGGCA
CAGTTCGAGCGGGTGCTCAAGACCATCGAAGAGACGCTGGCCCGTCAGGCACGCGAGGCCGAGGAGGCTCGTCAGCGCGA
ACTGCTTGCCGAACGCCAGCGTCAGCAGCAGCAACAACAAGCCAGGCCCAGCGGCAGCTCCGCGCCGAGTGGCCCGCTGG
TATCCAGCGCCGGTGGCAGCTTTGGCGGGCCGTTCGCCCAGGCCAAAGGTAAACTGCCCTGGCCGGTGGACGGACGTCTT
GTCGCCCGCTACGGCACTCCACGCGGCGGCGACGCTCGAACCAAGTGGGACGGCGTACTGATCGGCGCCAGTGCCGGCAC
CCAGGTCCGTGCCGTGCATGGCGGCCGGGTGGTGTTCGCCGACTGGTTGCGCGGTGCCGGCCTGCTGGTGATCCTCGATC
ACGGCAACGGTTACCTGAGCCTTTACGGACACAACCAGAGCCTGCTGCGGGACGCCGGCGACATCGTCAAGGCTGGCGAC
CCGATTGCCACGGTAGGCACCAGCGGCGGCCAGGAAACCGCCGCGCTGTATTTCGCCATTCGTCAGCACGGTCGCCCCAG
CGACCCTGCCCAATGGTGCCGCGCGCAAGGTTGA

Upstream 100 bases:

>100_bases
AGCCGCCCGCCAGGACATCGCCGAACTGCAGAAGCTGCTCAAGCAGATCGAGCAGGAGAAATCCGGCGTCCAGAAACAGC
TGCAGACCACCGAAAGCGAG

Downstream 100 bases:

>100_bases
CCGATGGCGGCATTCGGCCCCGCCGAGCCACCCGGTCCACCTGGCGTGCCCTCTCATTACTGGAGTTCGACATGTTGCAC
CTGCGCCGTTTCGCCCGCCC

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MGQLEKQVDTLQQEIDRSEAELERLNEEKTTLEGARLEQQRLIGLQARAAYQNGRQEYLKLLLNQQNPEKFSRTLTYYDY
LNKARLEQLDSFNETLRQLANVEADIEAQQNLLAEKKDGLLERRDQLAEVRKERQQALAKLNSDLSSREQRLQARRQEQA
QFERVLKTIEETLARQAREAEEARQRELLAERQRQQQQQQARPSGSSAPSGPLVSSAGGSFGGPFAQAKGKLPWPVDGRL
VARYGTPRGGDARTKWDGVLIGASAGTQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLSLYGHNQSLLRDAGDIVKAGD
PIATVGTSGGQETAALYFAIRQHGRPSDPAQWCRAQG

Sequences:

>Translated_357_residues
MGQLEKQVDTLQQEIDRSEAELERLNEEKTTLEGARLEQQRLIGLQARAAYQNGRQEYLKLLLNQQNPEKFSRTLTYYDY
LNKARLEQLDSFNETLRQLANVEADIEAQQNLLAEKKDGLLERRDQLAEVRKERQQALAKLNSDLSSREQRLQARRQEQA
QFERVLKTIEETLARQAREAEEARQRELLAERQRQQQQQQARPSGSSAPSGPLVSSAGGSFGGPFAQAKGKLPWPVDGRL
VARYGTPRGGDARTKWDGVLIGASAGTQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLSLYGHNQSLLRDAGDIVKAGD
PIATVGTSGGQETAALYFAIRQHGRPSDPAQWCRAQG
>Mature_356_residues
GQLEKQVDTLQQEIDRSEAELERLNEEKTTLEGARLEQQRLIGLQARAAYQNGRQEYLKLLLNQQNPEKFSRTLTYYDYL
NKARLEQLDSFNETLRQLANVEADIEAQQNLLAEKKDGLLERRDQLAEVRKERQQALAKLNSDLSSREQRLQARRQEQAQ
FERVLKTIEETLARQAREAEEARQRELLAERQRQQQQQQARPSGSSAPSGPLVSSAGGSFGGPFAQAKGKLPWPVDGRLV
ARYGTPRGGDARTKWDGVLIGASAGTQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLSLYGHNQSLLRDAGDIVKAGDP
IATVGTSGGQETAALYFAIRQHGRPSDPAQWCRAQG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=352, Percent_Identity=34.375, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=38.3333333333333, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082174, Length=125, Percent_Identity=35.2, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 39806; Mature: 39675

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQLEKQVDTLQQEIDRSEAELERLNEEKTTLEGARLEQQRLIGLQARAAYQNGRQEYLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLLNQQNPEKFSRTLTYYDYLNKARLEQLDSFNETLRQLANVEADIEAQQNLLAEKKDGL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LERRDQLAEVRKERQQALAKLNSDLSSREQRLQARRQEQAQFERVLKTIEETLARQAREA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEARQRELLAERQRQQQQQQARPSGSSAPSGPLVSSAGGSFGGPFAQAKGKLPWPVDGRL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEE
VARYGTPRGGDARTKWDGVLIGASAGTQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLS
EEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEEHHHHCCCCEEEEEECCCCEEE
LYGHNQSLLRDAGDIVKAGDPIATVGTSGGQETAALYFAIRQHGRPSDPAQWCRAQG
EEECCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure 
GQLEKQVDTLQQEIDRSEAELERLNEEKTTLEGARLEQQRLIGLQARAAYQNGRQEYLK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLLNQQNPEKFSRTLTYYDYLNKARLEQLDSFNETLRQLANVEADIEAQQNLLAEKKDGL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LERRDQLAEVRKERQQALAKLNSDLSSREQRLQARRQEQAQFERVLKTIEETLARQAREA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEARQRELLAERQRQQQQQQARPSGSSAPSGPLVSSAGGSFGGPFAQAKGKLPWPVDGRL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEE
VARYGTPRGGDARTKWDGVLIGASAGTQVRAVHGGRVVFADWLRGAGLLVILDHGNGYLS
EEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCEEEEHHHHCCCCEEEEEECCCCEEE
LYGHNQSLLRDAGDIVKAGDPIATVGTSGGQETAALYFAIRQHGRPSDPAQWCRAQG
EEECCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]