Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

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The map label for this gene is 146284361

Identifier: 146284361

GI number: 146284361

Start: 4401045

End: 4403597

Strand: Direct

Name: 146284361

Synonym: PST_4049

Alternate gene names: NA

Gene position: 4401045-4403597 (Clockwise)

Preceding gene: 146284360

Following gene: 146284363

Centisome position: 96.36

GC content: 66.35

Gene sequence:

>2553_bases
ATGCAAGACAAACAACTGTCCACCGAGGAACTGATCGCCCAGGACGTCGGTGCACGTTCGCCCGCCGGGCCGATGGCCGC
GGTCATCGCCGGGCTCGCACTGCTCTGGTCGCTGTTCCAGCTGTGGATCGCCTCGCCGCTGCCGTTCATCCTCGGCTTCG
GCGTGCTGAACGACACCGAAACCCGCTCGATTCACCTGGCCTTCGCCCTGCTGCTGGCTTTTCTCGCCTACCCGGCCTTC
AAGCGCTCGCCGCGTGACCGCGTGCCGCTAATGGACATCGCCCTCGGGCTGGTGGCCGCCGCCTGCGCCGCCTATCTGTT
TCTCGCCTATTCGCAACTGGCGCAGCGCCCCGGCAACCTGACCACCCTGGACCTGGTCACGGCCTGCGTCGGCATACCGC
TGCTGCTGGAAGCCACCCGCCGCGCCCTCGGCCCGCCGCTGGCGATCATCGCCCTGGTGTTCCTCGTCTACAGCGTCGCC
GGCCCCTGGATGCCCGGCCTGCTGGCCCACCGCGGGGTGAGCTTCACCGCACTGGCCAACCACCAGTGGATCACCACCGA
AGGCGTGTTCGGCATCGCCCTCGGCGTCTCCACCAGCTTCGTCTTCCTCTTCGTGCTGTTCGGTGCCTTGCTTGAGCGAG
CCGGCGCCGGGCATTACTTCATTCAGCTGGCCTTCAGCATGCTCGGCCATTTCCGCGGTGGTCCGGCCAAGGCGGCCGTG
GTGGCCTCCGGCATGACCGGCCTGATCTCCGGCTCGTCCATCGCCAACGTGGTGACCACCGGCACCTTCACCATCCCGAT
GATGAAACGCACCGGCTTCTCGGCGGAGAAGGCCGGCGCGGTGGAAGTGGCCTCCTCGGTCAACGGCCAGATCATGCCGC
CGGTGATGGGTGCGGCGGCCTTCCTGATGGTCGAGTACGTCGGCATTCCCTATGTGGAAGTGATCAAGCATGCCTTTCTC
CCGGCGCTGATCTCCTATATCGCGCTGATCTACATCGTCCACCTGGAATCGCTCAAGCTCGGTCTGCAGGCGCTGCCGCG
GGCCAACGTGGCCAAACCCTGGATGCAGCGGCTGATCGGCTTCGCCTTCGGCGCCGCGCTGATCTCCGGCCTTTCGCTGG
GCGTCTACTACGGCCTCGGCTGGCTCAAGCCGGCCCTCGGCGATGCCGCGCTGTGGGTCATCGCCGGGCTGCTGGCGCTG
GTCTACCTCGGTCTGCTGAAGATCGCCGCGAGCAACCCGCCGCTGCCCCATGAAGATCCCAACATGCCGCTGGAGAAGCT
GCCGGAAACCCGTCCGGTGCTGCTCTCCGGCTTGCACTTCCTGCTGCCGGTAGTGGTGCTGGTCTGGTGCCTGATGATCG
AGCGGCTGTCCCCCGGCCTCTCGGCCTTCTGGGGTTCGGTGATGCTGGTGATCATCCTGCTCACCCAGCGCCCGCTGCTG
TCATGGATGCGCCATGACCGCAGCCACGTGGACGGCACCTTCATGGACGGCGTGATCGACCTGCGCGAGGGCCTGATCGC
CGGTGCGCGCAACATGATCGGCATCGGCATCGCCACCGCGGCGGCGGGCATCATCGTCGGTGCGGTGTCGCAGACCGGCG
TGGGCCTGGTGCTGGCGGATCTGGTGGAACTGCTGTCGATGGGCAATCTGCTGCTGATGCTGTTGCTCACCGCCTTCCTC
AGCCTGATTCTCGGCATGGGCCTGCCCACCACCGCCAACTACATCGTGGTGTCCAGCCTGCTGGCGCCGGTGATCGTCGC
CCTGGGCCAGCAGAACGGGCTGATCGTGCCGCTGATCGCGGTGCATCTGTTCGTCTTCTACTTCGGCATCATGGCCGACG
TGACGCCGCCGGTGGGCCTGGCCTCGTTCGCCGCGGCGGCGGTGTCCAAGGGCGATCCGATCCGCACCGGGGTGACTGCG
TTCTATTACAGCCTGCGCACCGCGGCGCTGCCGTTCCTGTTCATCTTTAACACCGACCTGCTGCTGATCGGCGTGGACTT
CTGGCACGGCGTGCTGATCTTCATCGTCGCCACCATCGCCATGCTGATCTTCGCCGCCGGCACCCAGGGCTATTTCCTGG
TGCGCAGCCGCTGGTACGAGAGCCTGCTGTTGCTGCTGGTGGCCTTCACCCTGTTCCGCCCCGGCTTCTGGATGGATCTC
ATCCATGACCCGTATCAGGAGATTCCGCCGGCGCAGCTGGTGGAAGCACTGGGCAACGTCGAGGAAGACAGCCAGCTGCG
CCTGCGCGTGCTCGGCGAGGACGCAGTAGGCGATGCCCGTGAGTTCGTGCTGTTGCTGGCGATCCCGGACGGCGCCTCGG
GCGAGGAGAAGCTGGAGAAGATCGGCCTGATGACCTACGAGCAGGACGGCAAGCTGCTGGTGGACAGCGTCACCTTCGGC
AGCCCGGCTGCCGAGGCGGGGCTGGAGTTCGACCAGCAGATTCTCTCGGTACGCGCGCCGACCGACCGCTGGCCGAAGGA
ATTCATGTGGATTCCGGGCTTCCTGCTGTTCGGCCTGATCGTCTGGATGCAGCGCCGCCGCCGTCAGACCTGA

Upstream 100 bases:

>100_bases
CGTCCGCCGGCCTGATTGCCACGCCTCAGCTGAGAACCCGTGCGCCGTATGGCCACGGGTTTTCGCGGTTCCGTTACCTG
AAAAAAACAGGCCTCATTTC

Downstream 100 bases:

>100_bases
TCGACTCGGAAGCGTCTGAAACCCCGGTCACGTGCGAGCGTGCCGGGGTTTTTCATTTGGTGCTCCCACCGGCGTACCCG
CGCCAGGGCACCATGATCAA

Product: putative TRAP-type uncharacterized transport system, fused permease component

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transporter Fused Permeases; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; 4TM/12TM TRAP Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component

Number of amino acids: Translated: 850; Mature: 850

Protein sequence:

>850_residues
MQDKQLSTEELIAQDVGARSPAGPMAAVIAGLALLWSLFQLWIASPLPFILGFGVLNDTETRSIHLAFALLLAFLAYPAF
KRSPRDRVPLMDIALGLVAAACAAYLFLAYSQLAQRPGNLTTLDLVTACVGIPLLLEATRRALGPPLAIIALVFLVYSVA
GPWMPGLLAHRGVSFTALANHQWITTEGVFGIALGVSTSFVFLFVLFGALLERAGAGHYFIQLAFSMLGHFRGGPAKAAV
VASGMTGLISGSSIANVVTTGTFTIPMMKRTGFSAEKAGAVEVASSVNGQIMPPVMGAAAFLMVEYVGIPYVEVIKHAFL
PALISYIALIYIVHLESLKLGLQALPRANVAKPWMQRLIGFAFGAALISGLSLGVYYGLGWLKPALGDAALWVIAGLLAL
VYLGLLKIAASNPPLPHEDPNMPLEKLPETRPVLLSGLHFLLPVVVLVWCLMIERLSPGLSAFWGSVMLVIILLTQRPLL
SWMRHDRSHVDGTFMDGVIDLREGLIAGARNMIGIGIATAAAGIIVGAVSQTGVGLVLADLVELLSMGNLLLMLLLTAFL
SLILGMGLPTTANYIVVSSLLAPVIVALGQQNGLIVPLIAVHLFVFYFGIMADVTPPVGLASFAAAAVSKGDPIRTGVTA
FYYSLRTAALPFLFIFNTDLLLIGVDFWHGVLIFIVATIAMLIFAAGTQGYFLVRSRWYESLLLLLVAFTLFRPGFWMDL
IHDPYQEIPPAQLVEALGNVEEDSQLRLRVLGEDAVGDAREFVLLLAIPDGASGEEKLEKIGLMTYEQDGKLLVDSVTFG
SPAAEAGLEFDQQILSVRAPTDRWPKEFMWIPGFLLFGLIVWMQRRRRQT

Sequences:

>Translated_850_residues
MQDKQLSTEELIAQDVGARSPAGPMAAVIAGLALLWSLFQLWIASPLPFILGFGVLNDTETRSIHLAFALLLAFLAYPAF
KRSPRDRVPLMDIALGLVAAACAAYLFLAYSQLAQRPGNLTTLDLVTACVGIPLLLEATRRALGPPLAIIALVFLVYSVA
GPWMPGLLAHRGVSFTALANHQWITTEGVFGIALGVSTSFVFLFVLFGALLERAGAGHYFIQLAFSMLGHFRGGPAKAAV
VASGMTGLISGSSIANVVTTGTFTIPMMKRTGFSAEKAGAVEVASSVNGQIMPPVMGAAAFLMVEYVGIPYVEVIKHAFL
PALISYIALIYIVHLESLKLGLQALPRANVAKPWMQRLIGFAFGAALISGLSLGVYYGLGWLKPALGDAALWVIAGLLAL
VYLGLLKIAASNPPLPHEDPNMPLEKLPETRPVLLSGLHFLLPVVVLVWCLMIERLSPGLSAFWGSVMLVIILLTQRPLL
SWMRHDRSHVDGTFMDGVIDLREGLIAGARNMIGIGIATAAAGIIVGAVSQTGVGLVLADLVELLSMGNLLLMLLLTAFL
SLILGMGLPTTANYIVVSSLLAPVIVALGQQNGLIVPLIAVHLFVFYFGIMADVTPPVGLASFAAAAVSKGDPIRTGVTA
FYYSLRTAALPFLFIFNTDLLLIGVDFWHGVLIFIVATIAMLIFAAGTQGYFLVRSRWYESLLLLLVAFTLFRPGFWMDL
IHDPYQEIPPAQLVEALGNVEEDSQLRLRVLGEDAVGDAREFVLLLAIPDGASGEEKLEKIGLMTYEQDGKLLVDSVTFG
SPAAEAGLEFDQQILSVRAPTDRWPKEFMWIPGFLLFGLIVWMQRRRRQT
>Mature_850_residues
MQDKQLSTEELIAQDVGARSPAGPMAAVIAGLALLWSLFQLWIASPLPFILGFGVLNDTETRSIHLAFALLLAFLAYPAF
KRSPRDRVPLMDIALGLVAAACAAYLFLAYSQLAQRPGNLTTLDLVTACVGIPLLLEATRRALGPPLAIIALVFLVYSVA
GPWMPGLLAHRGVSFTALANHQWITTEGVFGIALGVSTSFVFLFVLFGALLERAGAGHYFIQLAFSMLGHFRGGPAKAAV
VASGMTGLISGSSIANVVTTGTFTIPMMKRTGFSAEKAGAVEVASSVNGQIMPPVMGAAAFLMVEYVGIPYVEVIKHAFL
PALISYIALIYIVHLESLKLGLQALPRANVAKPWMQRLIGFAFGAALISGLSLGVYYGLGWLKPALGDAALWVIAGLLAL
VYLGLLKIAASNPPLPHEDPNMPLEKLPETRPVLLSGLHFLLPVVVLVWCLMIERLSPGLSAFWGSVMLVIILLTQRPLL
SWMRHDRSHVDGTFMDGVIDLREGLIAGARNMIGIGIATAAAGIIVGAVSQTGVGLVLADLVELLSMGNLLLMLLLTAFL
SLILGMGLPTTANYIVVSSLLAPVIVALGQQNGLIVPLIAVHLFVFYFGIMADVTPPVGLASFAAAAVSKGDPIRTGVTA
FYYSLRTAALPFLFIFNTDLLLIGVDFWHGVLIFIVATIAMLIFAAGTQGYFLVRSRWYESLLLLLVAFTLFRPGFWMDL
IHDPYQEIPPAQLVEALGNVEEDSQLRLRVLGEDAVGDAREFVLLLAIPDGASGEEKLEKIGLMTYEQDGKLLVDSVTFG
SPAAEAGLEFDQQILSVRAPTDRWPKEFMWIPGFLLFGLIVWMQRRRRQT

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91453; Mature: 91453

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKQLSTEELIAQDVGARSPAGPMAAVIAGLALLWSLFQLWIASPLPFILGFGVLNDTE
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
TRSIHLAFALLLAFLAYPAFKRSPRDRVPLMDIALGLVAAACAAYLFLAYSQLAQRPGNL
HHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TTLDLVTACVGIPLLLEATRRALGPPLAIIALVFLVYSVAGPWMPGLLAHRGVSFTALAN
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECC
HQWITTEGVFGIALGVSTSFVFLFVLFGALLERAGAGHYFIQLAFSMLGHFRGGPAKAAV
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHH
VASGMTGLISGSSIANVVTTGTFTIPMMKRTGFSAEKAGAVEVASSVNGQIMPPVMGAAA
HHCCCHHHCCCCHHHHHHCCCEEEEEHHHHCCCCCHHCCHHHHHHCCCCCCCCHHHHHHH
FLMVEYVGIPYVEVIKHAFLPALISYIALIYIVHLESLKLGLQALPRANVAKPWMQRLIG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FAFGAALISGLSLGVYYGLGWLKPALGDAALWVIAGLLALVYLGLLKIAASNPPLPHEDP
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NMPLEKLPETRPVLLSGLHFLLPVVVLVWCLMIERLSPGLSAFWGSVMLVIILLTQRPLL
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH
SWMRHDRSHVDGTFMDGVIDLREGLIAGARNMIGIGIATAAAGIIVGAVSQTGVGLVLAD
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LVELLSMGNLLLMLLLTAFLSLILGMGLPTTANYIVVSSLLAPVIVALGQQNGLIVPLIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
VHLFVFYFGIMADVTPPVGLASFAAAAVSKGDPIRTGVTAFYYSLRTAALPFLFIFNTDL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
LLIGVDFWHGVLIFIVATIAMLIFAAGTQGYFLVRSRWYESLLLLLVAFTLFRPGFWMDL
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IHDPYQEIPPAQLVEALGNVEEDSQLRLRVLGEDAVGDAREFVLLLAIPDGASGEEKLEK
HCCCHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEEECCCCCCCHHHHHH
IGLMTYEQDGKLLVDSVTFGSPAAEAGLEFDQQILSVRAPTDRWPKEFMWIPGFLLFGLI
HCCCEEECCCCEEEEEECCCCCHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHH
VWMQRRRRQT
HHHHHHHCCC
>Mature Secondary Structure
MQDKQLSTEELIAQDVGARSPAGPMAAVIAGLALLWSLFQLWIASPLPFILGFGVLNDTE
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
TRSIHLAFALLLAFLAYPAFKRSPRDRVPLMDIALGLVAAACAAYLFLAYSQLAQRPGNL
HHHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TTLDLVTACVGIPLLLEATRRALGPPLAIIALVFLVYSVAGPWMPGLLAHRGVSFTALAN
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECC
HQWITTEGVFGIALGVSTSFVFLFVLFGALLERAGAGHYFIQLAFSMLGHFRGGPAKAAV
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHH
VASGMTGLISGSSIANVVTTGTFTIPMMKRTGFSAEKAGAVEVASSVNGQIMPPVMGAAA
HHCCCHHHCCCCHHHHHHCCCEEEEEHHHHCCCCCHHCCHHHHHHCCCCCCCCHHHHHHH
FLMVEYVGIPYVEVIKHAFLPALISYIALIYIVHLESLKLGLQALPRANVAKPWMQRLIG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FAFGAALISGLSLGVYYGLGWLKPALGDAALWVIAGLLALVYLGLLKIAASNPPLPHEDP
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NMPLEKLPETRPVLLSGLHFLLPVVVLVWCLMIERLSPGLSAFWGSVMLVIILLTQRPLL
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH
SWMRHDRSHVDGTFMDGVIDLREGLIAGARNMIGIGIATAAAGIIVGAVSQTGVGLVLAD
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LVELLSMGNLLLMLLLTAFLSLILGMGLPTTANYIVVSSLLAPVIVALGQQNGLIVPLIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
VHLFVFYFGIMADVTPPVGLASFAAAAVSKGDPIRTGVTAFYYSLRTAALPFLFIFNTDL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
LLIGVDFWHGVLIFIVATIAMLIFAAGTQGYFLVRSRWYESLLLLLVAFTLFRPGFWMDL
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IHDPYQEIPPAQLVEALGNVEEDSQLRLRVLGEDAVGDAREFVLLLAIPDGASGEEKLEK
HCCCHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEEECCCCCCCHHHHHH
IGLMTYEQDGKLLVDSVTFGSPAAEAGLEFDQQILSVRAPTDRWPKEFMWIPGFLLFGLI
HCCCEEECCCCEEEEEECCCCCHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHH
VWMQRRRRQT
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA