| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is bcsP31 [H]
Identifier: 146284360
GI number: 146284360
Start: 4399962
End: 4400927
Strand: Direct
Name: bcsP31 [H]
Synonym: PST_4048
Alternate gene names: 146284360
Gene position: 4399962-4400927 (Clockwise)
Preceding gene: 146284355
Following gene: 146284361
Centisome position: 96.33
GC content: 62.22
Gene sequence:
>966_bases ATGAAAGGCAAATCCTTGGCATGGATCTTTACCGCTGCTCTGGCGGGAACCGGCCTGAGCACAGTGGCACAGGCGCAAGA GAAGTTCGTCACCATCGGCACGGGCGGGCAGACCGGCGTTTACTACGTGGCCGGGCAATCGATCTGCCGCTTCGTCAACC GCAATGCGGAAAACATCAAGTGCAACGCCCCGGCCAGCGGCGGCGGCGTGGCCAACGTCAACGGTCTGCGCAGTGGCGAA TTCAACTTCGGCATCATGCAGTCCGACCACCAGTACAAGGCAATGGAAGGCGTCGCACCCTTCGAGAAAGAAGGGAAGAT GGACGACATCCGCGCGGTGTTCTCCCTGCAGAGCGAAGTCTTCACCGTACTGGCCCGTCGCAGCGCCAACATCAAGGGGC TCGATGACCTCAAGGGCAAGCGCGTCAACATCGGCAACCCCGGTTCCGGTCAGCGCGACACCCTCGAAGAGATCATGAAG GTCAAGGGCTGGGACAAGTCGGTGTTCTCCCTGGCCGCCGAGCTGAAGCCGGCTGAGCAGGCCAGCGCACTGGGCGACAA CAACATCGATGCCATGACCTACTTCGTCGGTCACCCCAACGGCGCGATCCAGGAAGCCACCACCACCACCGACGCGGTGC TGGTGCCGATCACCGGCCCGGAGATCGACAAGCTGCTCGAAGAGCGCAGCTACTACACCAAGGCCGAGATTCCCGGCGGC CTGTACAAGGGCAACGACCAGGCGACCCAGTCCATCGGTGGCAAGGCCGTGCTGTCCACCACCTCCAAGGTCGATGCCGA AGTGGTCTACCAGCTGGTCAAGTCGGTGTTCGAGAACATCGAGCGCTTCCAGCGCCTGCACCCGGCCTTCAAGGACCTGA AGCCGGAAGAGATGATCGAAGTCGGCCTGAGCGCGCCGCTGCATGAAGGCGCCGAGCGTTACTACAAGGAACGCGGCTGG CTGTAA
Upstream 100 bases:
>100_bases CGTGGGCTGTTCCAGGCGCAGCCGCCTGCTAGACTCAAGTTCCGCGCAGACTCACAAGGGATGCCCGGGATTCCGAAAAC AACCAAAAAGGAGTGCATCC
Downstream 100 bases:
>100_bases GGTTGGACAGGCCGCGTCGTCCGCCGGCCTGATTGCCACGCCTCAGCTGAGAACCCGTGCGCCGTATGGCCACGGGTTTT CGCGGTTCCGTTACCTGAAA
Product: TRAP-type uncharacterized transport system, periplasmic component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MKGKSLAWIFTAALAGTGLSTVAQAQEKFVTIGTGGQTGVYYVAGQSICRFVNRNAENIKCNAPASGGGVANVNGLRSGE FNFGIMQSDHQYKAMEGVAPFEKEGKMDDIRAVFSLQSEVFTVLARRSANIKGLDDLKGKRVNIGNPGSGQRDTLEEIMK VKGWDKSVFSLAAELKPAEQASALGDNNIDAMTYFVGHPNGAIQEATTTTDAVLVPITGPEIDKLLEERSYYTKAEIPGG LYKGNDQATQSIGGKAVLSTTSKVDAEVVYQLVKSVFENIERFQRLHPAFKDLKPEEMIEVGLSAPLHEGAERYYKERGW L
Sequences:
>Translated_321_residues MKGKSLAWIFTAALAGTGLSTVAQAQEKFVTIGTGGQTGVYYVAGQSICRFVNRNAENIKCNAPASGGGVANVNGLRSGE FNFGIMQSDHQYKAMEGVAPFEKEGKMDDIRAVFSLQSEVFTVLARRSANIKGLDDLKGKRVNIGNPGSGQRDTLEEIMK VKGWDKSVFSLAAELKPAEQASALGDNNIDAMTYFVGHPNGAIQEATTTTDAVLVPITGPEIDKLLEERSYYTKAEIPGG LYKGNDQATQSIGGKAVLSTTSKVDAEVVYQLVKSVFENIERFQRLHPAFKDLKPEEMIEVGLSAPLHEGAERYYKERGW L >Mature_321_residues MKGKSLAWIFTAALAGTGLSTVAQAQEKFVTIGTGGQTGVYYVAGQSICRFVNRNAENIKCNAPASGGGVANVNGLRSGE FNFGIMQSDHQYKAMEGVAPFEKEGKMDDIRAVFSLQSEVFTVLARRSANIKGLDDLKGKRVNIGNPGSGQRDTLEEIMK VKGWDKSVFSLAAELKPAEQASALGDNNIDAMTYFVGHPNGAIQEATTTTDAVLVPITGPEIDKLLEERSYYTKAEIPGG LYKGNDQATQSIGGKAVLSTTSKVDAEVVYQLVKSVFENIERFQRLHPAFKDLKPEEMIEVGLSAPLHEGAERYYKERGW L
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34781; Mature: 34781
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKSLAWIFTAALAGTGLSTVAQAQEKFVTIGTGGQTGVYYVAGQSICRFVNRNAENIK CCCCEEHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCCCEEEECHHHHHHHHHCCCCCEE CNAPASGGGVANVNGLRSGEFNFGIMQSDHQYKAMEGVAPFEKEGKMDDIRAVFSLQSEV ECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCHHCCCHHHHHHHHHHHHHH FTVLARRSANIKGLDDLKGKRVNIGNPGSGQRDTLEEIMKVKGWDKSVFSLAAELKPAEQ HHHHHHHCCCCCCCHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHH ASALGDNNIDAMTYFVGHPNGAIQEATTTTDAVLVPITGPEIDKLLEERSYYTKAEIPGG HHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCEEECCCCCC LYKGNDQATQSIGGKAVLSTTSKVDAEVVYQLVKSVFENIERFQRLHPAFKDLKPEEMIE CCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VGLSAPLHEGAERYYKERGWL HHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKGKSLAWIFTAALAGTGLSTVAQAQEKFVTIGTGGQTGVYYVAGQSICRFVNRNAENIK CCCCEEHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCCCEEEECHHHHHHHHHCCCCCEE CNAPASGGGVANVNGLRSGEFNFGIMQSDHQYKAMEGVAPFEKEGKMDDIRAVFSLQSEV ECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCHHCCCHHHHHHHHHHHHHH FTVLARRSANIKGLDDLKGKRVNIGNPGSGQRDTLEEIMKVKGWDKSVFSLAAELKPAEQ HHHHHHHCCCCCCCHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHH ASALGDNNIDAMTYFVGHPNGAIQEATTTTDAVLVPITGPEIDKLLEERSYYTKAEIPGG HHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCEEECCCCCC LYKGNDQATQSIGGKAVLSTTSKVDAEVVYQLVKSVFENIERFQRLHPAFKDLKPEEMIE CCCCCCHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VGLSAPLHEGAERYYKERGWL HHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]