| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yjbB [H]
Identifier: 146284348
GI number: 146284348
Start: 4384296
End: 4385975
Strand: Direct
Name: yjbB [H]
Synonym: PST_4036
Alternate gene names: 146284348
Gene position: 4384296-4385975 (Clockwise)
Preceding gene: 146284347
Following gene: 146284354
Centisome position: 95.99
GC content: 68.69
Gene sequence:
>1680_bases ATGCTGACCCTGCTGCACCTGCTGTCGTCCATTGCCCTGCTGGTCTGGGGTACGCATATCGTGCGCACCGGGATCATGCG GGTGTATGGCTCGCACCTGCGGCGCATGCTCGGCCAGAGCATGGGCAACGCGCCGCTGGCCTTCGGCGCCGGCATCGGCG TCACCGCGCTGGTGCAGAGCAGCAATGCCACCGCACTGCTGGCCATTTCCTTCGTCGCTCAGGGCCTGATGGGGCTGCCC ACGGCACTGGCGATCATGCTCGGCGCGGACGTCGGTACCGCGCTGATGGCGCGGGTGCTGACCCTCGACCTGTCCTGGCT GTCGCCGCTGCTGACGCTGGTCGGTGTCAGCCTGTTCCTCTCGCGCAAGCAGAGCCGCACCGGCCAGATCGGCCGCGTGC TGATCGGCCTCGGCCTGATCATCCTCGCCCTGCAGCTGATCGTGCACGCCGCCGAGCCGATCACCGAGGCGCGCGGCATG CAGGTGCTGTTCTCTTCGCTCGCCGGCGACACCCTGCTGGCGGTGCTGGTGGGTGCGCTGTTCGCCGTCCTGTCGTATTC CAGCCTGGCGGCGGTGCTGCTGACCTCGACGCTGGCCGGCGCGGGCCTGATCAGCCTGCCGGTGGCACTCGGCCTGGTGA TCGGCGCCAACATCGGCAGCGGCCTGCTCGCCTGGTTCAACGCCAGCCTGCAGCCTGCCTCGGCGCGGCGGGTGGCGCTG GGCAACCTGCTGTACAAGCTCGCCGGCCTCATCGTGCTGCCTTTCCTGGTGCCGCTGGTGGCCTGGATGGACACCCTCGG CTACAGCGCGCAGACCCAGGTGATCGGCTTCCACCTGGTCTACAACAGCCTGCGCTGCCTGCTCCTGCTGCCCACCGTGC ACCCCATGAGCCGGTTGTGCGAGCGCCTGCTGCCCGAGCGCCAGCTGGACAACGGCGTGGCGCAGCCGCGGCACCTCGAC CCGGCGGCGCTGGACACGCCGAGCCTGGCGCTGGCCAATGCAGTGCGCGAGACCCTGCGCATCGGCGACATGGTGGAGCT GATGCTGGCGCGCCTGCTGGAAGTGCTGCGCGAGGACCGTGCCGAACCGGGCGAGGAGATCCGCCGCCTGGACGACGACG TCGATGCGCTCTACAGCGGGGTCAAGCTCTACCTGGCGCAGATGCCCCGCGAGGACCTGGCCGAGCAGGAAGGCCGGCGC TGGGCGGAGATCATTGAACTGGCGATCAATCTGGAGCAGGCCGGCGACATCATCGAGCACATGGCGAGCAAGGTGCAGAA CCTCAAGACCGCCAAGCGCCGTTCCTTCTCCGACAGCGGGCTGGAGGAACTCGGCCAGCTGCATGCCCAGCTCAGCGCCA ACCTGCGGCTGGGCCTGTCGGTGTTCATCTCCGGCGACTCCCACGGTGCGCGCCAGCTTCTGCAGCAGAAGCGCCAGTTC CGCAAACTGGAGCGCGAGCTGGCCCATTCCCATGTGCATCGGCTGCACCGACAAGTGGTGGAAAGCATCGAGACCAGCGC GGCGCATCTGGAGCTGATTGCCGACATGAAACGGCTCAATTCGCTGTTCTGCAGCGCCGCCTATCCGGCTCTGGAAGGCC CGGGCAAGCCGCGCACTTCCGGCGACACCAACCGTGAGGTGCTGCCCAGCGAGCCGCACCTGCCGGGGCGTCCCGCCTAG
Upstream 100 bases:
>100_bases GGGCCGGCGGGCCAGGGTCAATCGAGTATCCCCGGTGCAGATCTGCGTCTTCATGACGCGGCTGTCGTCGTTGCCGCTCG CCGGGGCAGGAGCCCGAACC
Downstream 100 bases:
>100_bases CCTGCGCGGCGCTGCCAGAGGCGGAACAACGGCTCGGCGAGAAACATCACCAGAAACAGCCTGAGCACCTGCACCGCGGT AACCAGCGCCACCGAGAGCT
Product: Na/Pi cotransporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MLTLLHLLSSIALLVWGTHIVRTGIMRVYGSHLRRMLGQSMGNAPLAFGAGIGVTALVQSSNATALLAISFVAQGLMGLP TALAIMLGADVGTALMARVLTLDLSWLSPLLTLVGVSLFLSRKQSRTGQIGRVLIGLGLIILALQLIVHAAEPITEARGM QVLFSSLAGDTLLAVLVGALFAVLSYSSLAAVLLTSTLAGAGLISLPVALGLVIGANIGSGLLAWFNASLQPASARRVAL GNLLYKLAGLIVLPFLVPLVAWMDTLGYSAQTQVIGFHLVYNSLRCLLLLPTVHPMSRLCERLLPERQLDNGVAQPRHLD PAALDTPSLALANAVRETLRIGDMVELMLARLLEVLREDRAEPGEEIRRLDDDVDALYSGVKLYLAQMPREDLAEQEGRR WAEIIELAINLEQAGDIIEHMASKVQNLKTAKRRSFSDSGLEELGQLHAQLSANLRLGLSVFISGDSHGARQLLQQKRQF RKLERELAHSHVHRLHRQVVESIETSAAHLELIADMKRLNSLFCSAAYPALEGPGKPRTSGDTNREVLPSEPHLPGRPA
Sequences:
>Translated_559_residues MLTLLHLLSSIALLVWGTHIVRTGIMRVYGSHLRRMLGQSMGNAPLAFGAGIGVTALVQSSNATALLAISFVAQGLMGLP TALAIMLGADVGTALMARVLTLDLSWLSPLLTLVGVSLFLSRKQSRTGQIGRVLIGLGLIILALQLIVHAAEPITEARGM QVLFSSLAGDTLLAVLVGALFAVLSYSSLAAVLLTSTLAGAGLISLPVALGLVIGANIGSGLLAWFNASLQPASARRVAL GNLLYKLAGLIVLPFLVPLVAWMDTLGYSAQTQVIGFHLVYNSLRCLLLLPTVHPMSRLCERLLPERQLDNGVAQPRHLD PAALDTPSLALANAVRETLRIGDMVELMLARLLEVLREDRAEPGEEIRRLDDDVDALYSGVKLYLAQMPREDLAEQEGRR WAEIIELAINLEQAGDIIEHMASKVQNLKTAKRRSFSDSGLEELGQLHAQLSANLRLGLSVFISGDSHGARQLLQQKRQF RKLERELAHSHVHRLHRQVVESIETSAAHLELIADMKRLNSLFCSAAYPALEGPGKPRTSGDTNREVLPSEPHLPGRPA >Mature_559_residues MLTLLHLLSSIALLVWGTHIVRTGIMRVYGSHLRRMLGQSMGNAPLAFGAGIGVTALVQSSNATALLAISFVAQGLMGLP TALAIMLGADVGTALMARVLTLDLSWLSPLLTLVGVSLFLSRKQSRTGQIGRVLIGLGLIILALQLIVHAAEPITEARGM QVLFSSLAGDTLLAVLVGALFAVLSYSSLAAVLLTSTLAGAGLISLPVALGLVIGANIGSGLLAWFNASLQPASARRVAL GNLLYKLAGLIVLPFLVPLVAWMDTLGYSAQTQVIGFHLVYNSLRCLLLLPTVHPMSRLCERLLPERQLDNGVAQPRHLD PAALDTPSLALANAVRETLRIGDMVELMLARLLEVLREDRAEPGEEIRRLDDDVDALYSGVKLYLAQMPREDLAEQEGRR WAEIIELAINLEQAGDIIEHMASKVQNLKTAKRRSFSDSGLEELGQLHAQLSANLRLGLSVFISGDSHGARQLLQQKRQF RKLERELAHSHVHRLHRQVVESIETSAAHLELIADMKRLNSLFCSAAYPALEGPGKPRTSGDTNREVLPSEPHLPGRPA
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=539, Percent_Identity=61.4100185528757, Blast_Score=605, Evalue=1e-174,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 60291; Mature: 60291
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLLHLLSSIALLVWGTHIVRTGIMRVYGSHLRRMLGQSMGNAPLAFGAGIGVTALVQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHEEC SNATALLAISFVAQGLMGLPTALAIMLGADVGTALMARVLTLDLSWLSPLLTLVGVSLFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKQSRTGQIGRVLIGLGLIILALQLIVHAAEPITEARGMQVLFSSLAGDTLLAVLVGAL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVLSYSSLAAVLLTSTLAGAGLISLPVALGLVIGANIGSGLLAWFNASLQPASARRVAL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH GNLLYKLAGLIVLPFLVPLVAWMDTLGYSAQTQVIGFHLVYNSLRCLLLLPTVHPMSRLC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ERLLPERQLDNGVAQPRHLDPAALDTPSLALANAVRETLRIGDMVELMLARLLEVLREDR HHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AEPGEEIRRLDDDVDALYSGVKLYLAQMPREDLAEQEGRRWAEIIELAINLEQAGDIIEH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MASKVQNLKTAKRRSFSDSGLEELGQLHAQLSANLRLGLSVFISGDSHGARQLLQQKRQF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH RKLERELAHSHVHRLHRQVVESIETSAAHLELIADMKRLNSLFCSAAYPALEGPGKPRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GDTNREVLPSEPHLPGRPA CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTLLHLLSSIALLVWGTHIVRTGIMRVYGSHLRRMLGQSMGNAPLAFGAGIGVTALVQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHEEC SNATALLAISFVAQGLMGLPTALAIMLGADVGTALMARVLTLDLSWLSPLLTLVGVSLFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKQSRTGQIGRVLIGLGLIILALQLIVHAAEPITEARGMQVLFSSLAGDTLLAVLVGAL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVLSYSSLAAVLLTSTLAGAGLISLPVALGLVIGANIGSGLLAWFNASLQPASARRVAL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH GNLLYKLAGLIVLPFLVPLVAWMDTLGYSAQTQVIGFHLVYNSLRCLLLLPTVHPMSRLC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ERLLPERQLDNGVAQPRHLDPAALDTPSLALANAVRETLRIGDMVELMLARLLEVLREDR HHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AEPGEEIRRLDDDVDALYSGVKLYLAQMPREDLAEQEGRRWAEIIELAINLEQAGDIIEH CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MASKVQNLKTAKRRSFSDSGLEELGQLHAQLSANLRLGLSVFISGDSHGARQLLQQKRQF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH RKLERELAHSHVHRLHRQVVESIETSAAHLELIADMKRLNSLFCSAAYPALEGPGKPRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GDTNREVLPSEPHLPGRPA CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]