| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is 146284347
Identifier: 146284347
GI number: 146284347
Start: 4383273
End: 4384160
Strand: Direct
Name: 146284347
Synonym: PST_4035
Alternate gene names: NA
Gene position: 4383273-4384160 (Clockwise)
Preceding gene: 146284342
Following gene: 146284348
Centisome position: 95.97
GC content: 67.23
Gene sequence:
>888_bases ATGAACCGCAAGACGCTGCTCGTCCTTTCCCTTTCCGCCACCCTGGGCGCCACGCCGCTGCTGCATGCCCAGGAGCAGGC CCCGCAACGCACCCTTGGCTCGGTGGAGCGCAGCCACGCCAGCCAGGCTCGCGCCCTGCTCGACCAGGCCGTGCTGACCT TCCAGGCCAAGGGCCCGGAGCAGGCGCTGGCCGCCTTCAACGACCGCAGCGGCGAATTCGTCCGCGGCCAGTACTACATC TTCGTGCTCGGCGAGGACGGCACCATGCAGGCCAGCAGCGGGCCGTCGGCCAGCCTGGTGGGACTGAACGTCGGCGAGCT GAAGGACGCCTCCGGCAAGCCGTTCATGCGCGAGCTGCTGGACAAGTCGGCCAGGCAGGAAAGCGGCGAAGTCGAGTACA AGTGGCTCAACCCCGCCGACAACAAGGTCGAGAATAAGATCAGCCAGTTCCGCAAGGTCGGCGACCATGTGCTCTGCGTC GGCTATTACATCCCCCGCGCCACGGCCGAACATGCCAAGGCGCTGCTCGACCGCGCCGTGCAGCAGGTCAGGGACAAGGG TGCCGAGGCCGCCTTCCGCAGCTTCAACGACCCGCGCGGCGGCTTCGTCTTCCAGGATGAATACGTCTTCGCCATCGGCC TCGACGACGGCCGTTACCGCGCCAGCGGCAGCTCGCCGAACCTGGTGGGCGTCGATGTGCGCAGCGTCACCGATGCCGCC GGCAAGCCGCTGTTCAAGGACATGATCGAACTGGCACGCAAGCAGGGTTCGGGCACGGTGGATTACGTCTGGCGCAACCC GGCGACCAATGCGGTCGAGCAGAAGCACACGCTGATCCAGCGGGTCGACGACGTGCTGCTGGGCGTGGGCTACTACACCC GCCCCTGA
Upstream 100 bases:
>100_bases CCTTTTGCTTCTCTCGACCAATATCAATTGCGCCGCGGCTGCCTAGCATGGGCTTGAGGGGCGGCTGCTTGGTCGCCCGC CATCCGCTCGGGAGTCGTTC
Downstream 100 bases:
>100_bases GGGCACTCGCAGGGTTTGTGACGGTTCGGTGAACGGGGCCGGCGGGCCAGGGTCAATCGAGTATCCCCGGTGCAGATCTG CGTCTTCATGACGCGGCTGT
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: Cache Sensor Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Methyl-Accepting Chemotaxis Protein; Cache Type 2 Domain Protein; Cache Domain-Contain Protein; Signal Transduction Histidine Kinase-Like; Chemotaxis Sensory Transducer; Cache Domain Family
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNRKTLLVLSLSATLGATPLLHAQEQAPQRTLGSVERSHASQARALLDQAVLTFQAKGPEQALAAFNDRSGEFVRGQYYI FVLGEDGTMQASSGPSASLVGLNVGELKDASGKPFMRELLDKSARQESGEVEYKWLNPADNKVENKISQFRKVGDHVLCV GYYIPRATAEHAKALLDRAVQQVRDKGAEAAFRSFNDPRGGFVFQDEYVFAIGLDDGRYRASGSSPNLVGVDVRSVTDAA GKPLFKDMIELARKQGSGTVDYVWRNPATNAVEQKHTLIQRVDDVLLGVGYYTRP
Sequences:
>Translated_295_residues MNRKTLLVLSLSATLGATPLLHAQEQAPQRTLGSVERSHASQARALLDQAVLTFQAKGPEQALAAFNDRSGEFVRGQYYI FVLGEDGTMQASSGPSASLVGLNVGELKDASGKPFMRELLDKSARQESGEVEYKWLNPADNKVENKISQFRKVGDHVLCV GYYIPRATAEHAKALLDRAVQQVRDKGAEAAFRSFNDPRGGFVFQDEYVFAIGLDDGRYRASGSSPNLVGVDVRSVTDAA GKPLFKDMIELARKQGSGTVDYVWRNPATNAVEQKHTLIQRVDDVLLGVGYYTRP >Mature_295_residues MNRKTLLVLSLSATLGATPLLHAQEQAPQRTLGSVERSHASQARALLDQAVLTFQAKGPEQALAAFNDRSGEFVRGQYYI FVLGEDGTMQASSGPSASLVGLNVGELKDASGKPFMRELLDKSARQESGEVEYKWLNPADNKVENKISQFRKVGDHVLCV GYYIPRATAEHAKALLDRAVQQVRDKGAEAAFRSFNDPRGGFVFQDEYVFAIGLDDGRYRASGSSPNLVGVDVRSVTDAA GKPLFKDMIELARKQGSGTVDYVWRNPATNAVEQKHTLIQRVDDVLLGVGYYTRP
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32293; Mature: 32293
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKTLLVLSLSATLGATPLLHAQEQAPQRTLGSVERSHASQARALLDQAVLTFQAKGPE CCCCEEEEEEECCHHCCCCCHHCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH QALAAFNDRSGEFVRGQYYIFVLGEDGTMQASSGPSASLVGLNVGELKDASGKPFMRELL HHHHHHCCCCCCEEEEEEEEEEECCCCCEECCCCCCCEEEECCHHCCCCCCCCHHHHHHH DKSARQESGEVEYKWLNPADNKVENKISQFRKVGDHVLCVGYYIPRATAEHAKALLDRAV HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHH QQVRDKGAEAAFRSFNDPRGGFVFQDEYVFAIGLDDGRYRASGSSPNLVGVDVRSVTDAA HHHHHCCHHHHHHCCCCCCCCEEEECCEEEEEECCCCCEECCCCCCCEEEEEHHHHHHHC GKPLFKDMIELARKQGSGTVDYVWRNPATNAVEQKHTLIQRVDDVLLGVGYYTRP CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRKTLLVLSLSATLGATPLLHAQEQAPQRTLGSVERSHASQARALLDQAVLTFQAKGPE CCCCEEEEEEECCHHCCCCCHHCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH QALAAFNDRSGEFVRGQYYIFVLGEDGTMQASSGPSASLVGLNVGELKDASGKPFMRELL HHHHHHCCCCCCEEEEEEEEEEECCCCCEECCCCCCCEEEECCHHCCCCCCCCHHHHHHH DKSARQESGEVEYKWLNPADNKVENKISQFRKVGDHVLCVGYYIPRATAEHAKALLDRAV HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHH QQVRDKGAEAAFRSFNDPRGGFVFQDEYVFAIGLDDGRYRASGSSPNLVGVDVRSVTDAA HHHHHCCHHHHHHCCCCCCCCEEEECCEEEEEECCCCCEECCCCCCCEEEEEHHHHHHHC GKPLFKDMIELARKQGSGTVDYVWRNPATNAVEQKHTLIQRVDDVLLGVGYYTRP CCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA