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The map label for this gene is fdx1 [H]

Identifier: 146284315

GI number: 146284315

Start: 4340978

End: 4341229

Strand: Direct

Name: fdx1 [H]

Synonym: PST_4003

Alternate gene names: 146284315

Gene position: 4340978-4341229 (Clockwise)

Preceding gene: 146284314

Following gene: 146284316

Centisome position: 95.04

GC content: 59.13

Gene sequence:

>252_bases
ATGTCCCTGAAAATCACCGATGACTGCATCAACTGCGATGTCTGCGAGCCGGAGTGCCCGAACAGCGCCATCTCCCAGGG
CGAGGAGATCTACGTCATCGACCCCAACCTCTGCACCGAGTGCGTCGGCCACTATGACGAGCCGCAGTGCCAGCAGGTCT
GCCCGGTAGACTGCATCCCGCTCGACGAGAACAACGTCGAGAGCAAGGACGAACTGATGCAGAAATACCTGATCATCACC
GGCAAGGCGTGA

Upstream 100 bases:

>100_bases
CGTCGGCCCTGCGTCGAGTGCACGCCGAGCGTCGATGCGGCACAATTGGCCGTCGTAATTTAGCTGTGCCGTGGTTCGAG
CCACGGCAGGAGTTCGCTGG

Downstream 100 bases:

>100_bases
TGCGCTGGCGGCGACCGACCCGGCGGAGGCTCCTGTTCAGGGTGCTCCACGGCTGGTTCGCCGCCCTGCTGTTACTGGCC
TGCAGCGTCCAGGCCAACCC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSLKITDDCINCDVCEPECPNSAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDENNVESKDELMQKYLIIT
GKA

Sequences:

>Translated_83_residues
MSLKITDDCINCDVCEPECPNSAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDENNVESKDELMQKYLIIT
GKA
>Mature_82_residues
SLKITDDCINCDVCEPECPNSAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDENNVESKDELMQKYLIITG
KA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=80, Percent_Identity=53.75, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9256; Mature: 9124

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
11.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKITDDCINCDVCEPECPNSAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIP
CCEECCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCEEE
LDENNVESKDELMQKYLIITGKA
CCCCCCCCHHHHHHHHHEEECCC
>Mature Secondary Structure 
SLKITDDCINCDVCEPECPNSAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIP
CEECCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCEEE
LDENNVESKDELMQKYLIITGKA
CCCCCCCCHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]