| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yheT [H]
Identifier: 146284309
GI number: 146284309
Start: 4334762
End: 4335958
Strand: Direct
Name: yheT [H]
Synonym: PST_3996
Alternate gene names: 146284309
Gene position: 4334762-4335958 (Clockwise)
Preceding gene: 146284307
Following gene: 146284311
Centisome position: 94.91
GC content: 68.0
Gene sequence:
>1197_bases ATGGGTATACCGGCGCCCACTGTCCACCGCCCGCGTGGCGCTGACCATATCTCCAAAGGCATACGCCGCCGCCCGGCCAG CACCATTCAGCCCCTGCATGGCGCTTTTCTTCCGCCGGGCAGCGCTCTAACGTCGCGCTTAAACAGAGGAATCCGAGCGA ACGTGTCCGACCCTTTCCAACCGGCGTGGTGGCTGCCAGGCCCGCACCTGCAGACCCTGTGGAACCCGTTCTTTCGCCGC GCGCCGCGCCTGGCCCGCCAGCGCGAACGGCTGTGGCTGGCCGACGGCGATTTCATCGATCTGGACTGGCACGGCCCGCA CGAGGCTTCGGCGCCGCTGGTGCTGGTGTTGCACGGGCTGACCGGCTCGTCCAGTTCGCTCTATGTGCTCGGCCTGCAGC AGCAACTGGCCGCGCGCGGCTGGGCCAGCGTCGCCATCAACTGGCGCGGCTGCTCGGGCGAGCCGAACCTGTTGCCGCGC GCCTACCACTCCGGCGCCAGCGACGACCTTGCCGAAGTCATCGGCCATCTGCAGGCCAAGCGCCCGCTGGCACCGCTGTA TGCGGTCGGCTACTCGTTGGGTGGCAACGTGCTGCTCAAGTACCTGGGCGAAAGCGGCATCGGCAGCCCACTGCGCAAGG CGGTCGCGGTGTCGGTGCCGTTTCGCCTGGACCAGTGCGCCGATCGCATCGGCCTGGGTTTCTCACGCGTCTACCAGGCG CACTTCATGAAGGCCATGGTCGCCTATGTGAAGGACAAGCAGCAGCGTTTCCAGCATGAAGGCCTGACCGAGCATCTGGG CGCCCTGCAGCGCCTGGGTCCGCTGCAGGGCATGCGCACCTTCTGGGACTTCGACGGCCGCTTCACCGCACCGCTGCACG GCTACAGCGACGCCCACGACTACTATCGCCGCGCCTCCAGCCGCTACTACCTGCCGACGATCACCACGCCGACCCTGCTG ATCCAGGCCGAGGACGACCCTTTCGTGTTCCGCCACAGCGTGCCGGAACCGGCCGAACTGTCCGCGAGCACCTCCCTGGA GTTGCACCGCCGCGGCGGCCACGTCGGCTTTGTCGAAGGCACGCCACGCCGCCCTCGCTACTACCTGGAGCGGCGCATTC CGCAATGGCTGGGCGAGCCTGGGCCCGGTCAGGCGTCCGTCGTCGGCAGCAACGCATCCAGCGCGACGAAGTACTGA
Upstream 100 bases:
>100_bases CGGCGCTGACGAAGACGAACAGCAGGCGCTGCGGTTCACGCTCCTGGCGCGCAGCCGCCAGCAGTTGGTCGAAGGGGGTC AGGGTCATGGTTTGGTCCAG
Downstream 100 bases:
>100_bases CGTTGCAAGGCAGCCACCGCCTCGCGGGCGCCGGTCGCGACGAAGCCGCTTTCCAGCGCCAGCACCTGATAGATGCCCCG CCGCATCTGTACCGGATCGA
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MGIPAPTVHRPRGADHISKGIRRRPASTIQPLHGAFLPPGSALTSRLNRGIRANVSDPFQPAWWLPGPHLQTLWNPFFRR APRLARQRERLWLADGDFIDLDWHGPHEASAPLVLVLHGLTGSSSSLYVLGLQQQLAARGWASVAINWRGCSGEPNLLPR AYHSGASDDLAEVIGHLQAKRPLAPLYAVGYSLGGNVLLKYLGESGIGSPLRKAVAVSVPFRLDQCADRIGLGFSRVYQA HFMKAMVAYVKDKQQRFQHEGLTEHLGALQRLGPLQGMRTFWDFDGRFTAPLHGYSDAHDYYRRASSRYYLPTITTPTLL IQAEDDPFVFRHSVPEPAELSASTSLELHRRGGHVGFVEGTPRRPRYYLERRIPQWLGEPGPGQASVVGSNASSATKY
Sequences:
>Translated_398_residues MGIPAPTVHRPRGADHISKGIRRRPASTIQPLHGAFLPPGSALTSRLNRGIRANVSDPFQPAWWLPGPHLQTLWNPFFRR APRLARQRERLWLADGDFIDLDWHGPHEASAPLVLVLHGLTGSSSSLYVLGLQQQLAARGWASVAINWRGCSGEPNLLPR AYHSGASDDLAEVIGHLQAKRPLAPLYAVGYSLGGNVLLKYLGESGIGSPLRKAVAVSVPFRLDQCADRIGLGFSRVYQA HFMKAMVAYVKDKQQRFQHEGLTEHLGALQRLGPLQGMRTFWDFDGRFTAPLHGYSDAHDYYRRASSRYYLPTITTPTLL IQAEDDPFVFRHSVPEPAELSASTSLELHRRGGHVGFVEGTPRRPRYYLERRIPQWLGEPGPGQASVVGSNASSATKY >Mature_397_residues GIPAPTVHRPRGADHISKGIRRRPASTIQPLHGAFLPPGSALTSRLNRGIRANVSDPFQPAWWLPGPHLQTLWNPFFRRA PRLARQRERLWLADGDFIDLDWHGPHEASAPLVLVLHGLTGSSSSLYVLGLQQQLAARGWASVAINWRGCSGEPNLLPRA YHSGASDDLAEVIGHLQAKRPLAPLYAVGYSLGGNVLLKYLGESGIGSPLRKAVAVSVPFRLDQCADRIGLGFSRVYQAH FMKAMVAYVKDKQQRFQHEGLTEHLGALQRLGPLQGMRTFWDFDGRFTAPLHGYSDAHDYYRRASSRYYLPTITTPTLLI QAEDDPFVFRHSVPEPAELSASTSLELHRRGGHVGFVEGTPRRPRYYLERRIPQWLGEPGPGQASVVGSNASSATKY
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=332, Percent_Identity=30.421686746988, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI194578891, Length=364, Percent_Identity=29.1208791208791, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI269315865, Length=344, Percent_Identity=29.9418604651163, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1789752, Length=325, Percent_Identity=41.8461538461538, Blast_Score=230, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17566110, Length=354, Percent_Identity=26.8361581920904, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71985405, Length=346, Percent_Identity=26.3005780346821, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71985413, Length=220, Percent_Identity=28.6363636363636, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6325162, Length=292, Percent_Identity=30.8219178082192, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323866, Length=267, Percent_Identity=28.8389513108614, Blast_Score=116, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6319655, Length=301, Percent_Identity=28.9036544850498, Blast_Score=97, Evalue=4e-21, Organism=Drosophila melanogaster, GI24652003, Length=339, Percent_Identity=28.6135693215339, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI281398151, Length=335, Percent_Identity=28.6567164179104, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI24581365, Length=310, Percent_Identity=25.1612903225806, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 44104; Mature: 43972
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPAPTVHRPRGADHISKGIRRRPASTIQPLHGAFLPPGSALTSRLNRGIRANVSDPFQ CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC PAWWLPGPHLQTLWNPFFRRAPRLARQRERLWLADGDFIDLDWHGPHEASAPLVLVLHGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECCCCCCCCCCCEEEEEECC TGSSSSLYVLGLQQQLAARGWASVAINWRGCSGEPNLLPRAYHSGASDDLAEVIGHLQAK CCCCCCEEEEECHHHHHHCCCEEEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHC RPLAPLYAVGYSLGGNVLLKYLGESGIGSPLRKAVAVSVPFRLDQCADRIGLGFSRVYQA CCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHEEEECCCHHHHHHHHHCCCHHHHHHH HFMKAMVAYVKDKQQRFQHEGLTEHLGALQRLGPLQGMRTFWDFDGRFTAPLHGYSDAHD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCCHHHH YYRRASSRYYLPTITTPTLLIQAEDDPFVFRHSVPEPAELSASTSLELHRRGGHVGFVEG HHHHCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCHHCCCCCCEEHHHCCCEEEEECC TPRRPRYYLERRIPQWLGEPGPGQASVVGSNASSATKY CCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure GIPAPTVHRPRGADHISKGIRRRPASTIQPLHGAFLPPGSALTSRLNRGIRANVSDPFQ CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC PAWWLPGPHLQTLWNPFFRRAPRLARQRERLWLADGDFIDLDWHGPHEASAPLVLVLHGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEECCCCCCCCCCCEEEEEECC TGSSSSLYVLGLQQQLAARGWASVAINWRGCSGEPNLLPRAYHSGASDDLAEVIGHLQAK CCCCCCEEEEECHHHHHHCCCEEEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHC RPLAPLYAVGYSLGGNVLLKYLGESGIGSPLRKAVAVSVPFRLDQCADRIGLGFSRVYQA CCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHEEEECCCHHHHHHHHHCCCHHHHHHH HFMKAMVAYVKDKQQRFQHEGLTEHLGALQRLGPLQGMRTFWDFDGRFTAPLHGYSDAHD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCCHHHH YYRRASSRYYLPTITTPTLLIQAEDDPFVFRHSVPEPAELSASTSLELHRRGGHVGFVEG HHHHCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCHHCCCCCCEEHHHCCCEEEEECC TPRRPRYYLERRIPQWLGEPGPGQASVVGSNASSATKY CCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]