| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is yhiN [H]
Identifier: 146284220
GI number: 146284220
Start: 4239415
End: 4240596
Strand: Direct
Name: yhiN [H]
Synonym: PST_3908
Alternate gene names: 146284220
Gene position: 4239415-4240596 (Clockwise)
Preceding gene: 146284218
Following gene: 146284227
Centisome position: 92.82
GC content: 65.65
Gene sequence:
>1182_bases GTGCAGACTGACGTGGTGGTAATCGGCGCCGGTGCCGCCGGCCTGATGTGTGCATTCACCGCCGCCGCGCGCGGCCGCCA GGTGCTGCTGCTCGACCACGCCAACAAGGCGGGCAAGAAGATCCTCATGTCCGGCGGCGGGCGCTGCAACTTCACCAACC TCTATACCGAGCCGGCCAACTTCCTTTCCAGCAACCCGCACTTCTGCAAGTCTGCCCTGGCGCGCTACACCCAATGGGAC TTCATCGAGATGGTCAGCCGCCACGGCGTGCCCTATCACGAGAAGAAGCTCGGCCAGCTGTTCTGCGATAACAAATCCAG CGACATCCTGGAGATGCTGCTGGACGAGTGCGGGCGGGCCGGAGTCGATCTGCGCCTGGACACCGCCGTGACGGCGATCG AGCGGCTCGATCAGGGGTATGCGCTGCAGACCGGCATCGGCGCGGTGCGCTGCCAGTCGCTGGTGATCGCCACTGGCGGG CTGTCGATCCCGACCCTGGGCGCCAGCGGCTTCGGCTATCAGATCGCCCGCCAGTTCGGCCACAACGTGCTGCCGACCCG CGCGGGCCTGGTGCCATTCACCATTACCGAACCGCAGCTCAAGACCCTGTGCAGCGAACTGTCCGGCACCTCGGTGGAGG ATTGCCTGGTCAGCTGCAACGGGCAGAGCTTCCGCGAGAACATCCTCTTCACCCATCGCGGGCTGTCCGGCCCGGCGATC CTGCAGATCTCATCCTACTGGCACCCGGGCGACGTGGTGCATATCGACCTGCTGCCGCACCTGGATCTGGTGGAATGGCT GACGGCGCAGCGACAGGAACGCCCCAACATCGAGCTCAAGACGCTGCTGGGTGAGGTTTTCACGCGCAAGATGGCCGGCC TTCTGTGCGAGCAGTGGTTCAGCTCACGGCCGCTGAAGCAGTACGGGCCCAGCGAGCTGGAAGCGATCGCGAACAAGCTG GCGGACTGGCAGGTGGTACCCGCCGGAACCGAGGGTTACCGGACGGCGGAGGTCACGCTGGGCGGTGTGGATACGCGCGA AGTGTCGTCCAAGACCATGGAGTCGCAGAAGGCGCCAGGGCTGTACTTCGTCGGCGAGGTGCTCGACGTCACCGGCCATC TGGGCGGCTTCAACTTCCAATGGGCCTGGGCGTCGGGCTACGCGGCCGGACAGTTCGTCTAG
Upstream 100 bases:
>100_bases ACAATGCAGGTCGATTGACGTCGGCGCCTCGTCGGATGCCTGGCTGCAGCGAAACCGCGAGCGGAGTACCATCGCGCGTT TTCGAACGAGGTATGCATTG
Downstream 100 bases:
>100_bases CCGGCGCAGCGCCGGAACCGCTACTCGTTGGTCCGGTTGGACGGCGGCGAGATTTCCCGCGGGCCGGCGGGATCGGTAGC GGTGTTCTGGTATTCCTGCT
Product: flavoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MQTDVVVIGAGAAGLMCAFTAAARGRQVLLLDHANKAGKKILMSGGGRCNFTNLYTEPANFLSSNPHFCKSALARYTQWD FIEMVSRHGVPYHEKKLGQLFCDNKSSDILEMLLDECGRAGVDLRLDTAVTAIERLDQGYALQTGIGAVRCQSLVIATGG LSIPTLGASGFGYQIARQFGHNVLPTRAGLVPFTITEPQLKTLCSELSGTSVEDCLVSCNGQSFRENILFTHRGLSGPAI LQISSYWHPGDVVHIDLLPHLDLVEWLTAQRQERPNIELKTLLGEVFTRKMAGLLCEQWFSSRPLKQYGPSELEAIANKL ADWQVVPAGTEGYRTAEVTLGGVDTREVSSKTMESQKAPGLYFVGEVLDVTGHLGGFNFQWAWASGYAAGQFV
Sequences:
>Translated_393_residues MQTDVVVIGAGAAGLMCAFTAAARGRQVLLLDHANKAGKKILMSGGGRCNFTNLYTEPANFLSSNPHFCKSALARYTQWD FIEMVSRHGVPYHEKKLGQLFCDNKSSDILEMLLDECGRAGVDLRLDTAVTAIERLDQGYALQTGIGAVRCQSLVIATGG LSIPTLGASGFGYQIARQFGHNVLPTRAGLVPFTITEPQLKTLCSELSGTSVEDCLVSCNGQSFRENILFTHRGLSGPAI LQISSYWHPGDVVHIDLLPHLDLVEWLTAQRQERPNIELKTLLGEVFTRKMAGLLCEQWFSSRPLKQYGPSELEAIANKL ADWQVVPAGTEGYRTAEVTLGGVDTREVSSKTMESQKAPGLYFVGEVLDVTGHLGGFNFQWAWASGYAAGQFV >Mature_393_residues MQTDVVVIGAGAAGLMCAFTAAARGRQVLLLDHANKAGKKILMSGGGRCNFTNLYTEPANFLSSNPHFCKSALARYTQWD FIEMVSRHGVPYHEKKLGQLFCDNKSSDILEMLLDECGRAGVDLRLDTAVTAIERLDQGYALQTGIGAVRCQSLVIATGG LSIPTLGASGFGYQIARQFGHNVLPTRAGLVPFTITEPQLKTLCSELSGTSVEDCLVSCNGQSFRENILFTHRGLSGPAI LQISSYWHPGDVVHIDLLPHLDLVEWLTAQRQERPNIELKTLLGEVFTRKMAGLLCEQWFSSRPLKQYGPSELEAIANKL ADWQVVPAGTEGYRTAEVTLGGVDTREVSSKTMESQKAPGLYFVGEVLDVTGHLGGFNFQWAWASGYAAGQFV
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=380, Percent_Identity=56.8421052631579, Blast_Score=445, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 42762; Mature: 42762
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDVVVIGAGAAGLMCAFTAAARGRQVLLLDHANKAGKKILMSGGGRCNFTNLYTEPAN CCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEEECEEECCCHH FLSSNPHFCKSALARYTQWDFIEMVSRHGVPYHEKKLGQLFCDNKSSDILEMLLDECGRA HHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC GVDLRLDTAVTAIERLDQGYALQTGIGAVRCQSLVIATGGLSIPTLGASGFGYQIARQFG CCCEEEHHHHHHHHHHCCCCEECCCCCHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHC HNVLPTRAGLVPFTITEPQLKTLCSELSGTSVEDCLVSCNGQSFRENILFTHRGLSGPAI CCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHEECCCCHHHHCEEEEECCCCCCEE LQISSYWHPGDVVHIDLLPHLDLVEWLTAQRQERPNIELKTLLGEVFTRKMAGLLCEQWF EEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SSRPLKQYGPSELEAIANKLADWQVVPAGTEGYRTAEVTLGGVDTREVSSKTMESQKAPG CCCCHHHCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC LYFVGEVLDVTGHLGGFNFQWAWASGYAAGQFV EEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MQTDVVVIGAGAAGLMCAFTAAARGRQVLLLDHANKAGKKILMSGGGRCNFTNLYTEPAN CCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEEECEEECCCHH FLSSNPHFCKSALARYTQWDFIEMVSRHGVPYHEKKLGQLFCDNKSSDILEMLLDECGRA HHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC GVDLRLDTAVTAIERLDQGYALQTGIGAVRCQSLVIATGGLSIPTLGASGFGYQIARQFG CCCEEEHHHHHHHHHHCCCCEECCCCCHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHC HNVLPTRAGLVPFTITEPQLKTLCSELSGTSVEDCLVSCNGQSFRENILFTHRGLSGPAI CCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHEECCCCHHHHCEEEEECCCCCCEE LQISSYWHPGDVVHIDLLPHLDLVEWLTAQRQERPNIELKTLLGEVFTRKMAGLLCEQWF EEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SSRPLKQYGPSELEAIANKLADWQVVPAGTEGYRTAEVTLGGVDTREVSSKTMESQKAPG CCCCHHHCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC LYFVGEVLDVTGHLGGFNFQWAWASGYAAGQFV EEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]