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The map label for this gene is aidB [C]

Identifier: 146284190

GI number: 146284190

Start: 4199902

End: 4201704

Strand: Direct

Name: aidB [C]

Synonym: PST_3878

Alternate gene names: 146284190

Gene position: 4199902-4201704 (Clockwise)

Preceding gene: 146284189

Following gene: 146284191

Centisome position: 91.95

GC content: 66.0

Gene sequence:

>1803_bases
ATGACCGAGACCCTGCTCTGCCCGCGCAACCTGGCCTTCGAACTCTACGAGGTGCTGGACGCCGAGGCCCTGACGCGCCG
CGAGCGCTTCGCCGATCACAGCCGCGAAACCTTCGATGCCGCCATCGGCACCGCCCGCAGCATCGCCGAGAAATATTTCG
CGCCGCACAACCGCAAGTCCGACGAGCACGAGCCGGTCTACCAGAACGGCGAGGCGGTGCTGATCCCGGAAGTCAAACCA
GCGGTCGACGCCTTTATCGAGGCGGGTTTCCACAATGCCCAGCGCAGTTTCGACGACGGCGGCATGCAGCTGCCCAACCT
GCTGTCGCGTGCCTGCTTCGCCCACTTCCAGTCGGCCAACATCGCCACCAGCTCCTACCCGATGCTGAGCATGGGCGCCT
CGCACCTGATCGAGACCTTCGGTTCCGAGGAGCAGAAGCGGCGCTTCCTGCAGCCTATGCTCGAGGGCCGTTTCTTCGGC
ACCATGGCGCTTACCGAGCCGCATGCCGGCTCCTCGCTATCGGACATCCGCACCCGCGCCGAACCGGCCGGCGACGGTAG
CTACCGGCTCAAGGGCAACAAGATCTTTATTTCCGGCGGCGACCACCCGCTGTCGGAAAACATCGTGCACATGGTGCTGG
CCAAGCTGCCGGACGCACCGCCCGGGGTTAAGGGCATCAGCCTGTTCATCGTGCCGAAGTTCCTGGTCAACGACGACGGT
TCGCTGGGCGAACGCAACGACGTGCTGCTGGCCGGCCTGTTCCACAAGATGGGTTGGCGCGGCACCACCAGCACCGCGTT
GAACTTCGGCGACAACGGCAACTGCGTCGGCTATCTGGTGGGCGAGCCGCACAAGGGCCTGGCCTACATGTTCCAGATGA
TGAACGAGGCGCGCATCGGTGTCGGCATGGGCGCGATCATGCTCGGCTACGCCGGCTACCTCTACTCGCTGAACTACGCC
CGCGAGCGTCCGCAGGGCCGACTGCCGGACGGCAAGGACCCGGCGTCGACCCAGGTGCCGATCATCGAGCACACCGACGT
CAAGCGCATGCTGCTGACGCAGAAGGCCTACGTCGAGGGCGCCTTCGACCTCGGCCTGTATTCCGCGCGGCTGGTGGACG
ACGAGCACACCGCGGAAAGCGAGGAGGCGCGGCGCAGTGCGGCGGAATTGCTCGACCTGCTCACCCCCATCGTCAAGTCC
TGGCCATCGGAGTTCTGCCTGAAGGCCAACGAACTGGCGATCCAGATCCTCGGCGGCCACGGCTACACCCGCGAGTACCC
GGTGGAGCAGTACTACCGCGACAACCGCCTCAACCCGATCCATGAAGGCACTCACGGTATCCAGTCGCTGGACCTGCTCG
GCCGCAAGCTGATGCAGAACAAGGGCGCCGGCCTGCGCCAGCTGATCGGGCTGATCCAGGACTGCTGCCAGCGCGCCGCC
GAATACGACTCGCTCGGTGCCTTGCGCCAGCCACTGGAACAGCACGTCGCCCGGCTGACCAGCGTGACCCAGGCGCTTCT
GGGCGACCTGATGGCAGGGAAGGTCAACCAGGCGCTGGCCAACTCGGCGCTGTATCTGAAGGTGTTCGGCCACGCTGTGA
TCGGCTGGCGCTGGCTGGAACAGGCACTGCGTGCCGAGCGCGGGTTGGCCGAGGGCAATCCGGCAGATGCCGACTTCTAC
CGCGGCAAGCTGCAGGCGGCGCGCTATTTCCTGACCTGGGAAGTGCCGGCCTGCGCCCACGAGCTGGCGCTTCTGGAAGC
CCGCGACGACACCTGCCTGGGCATGCAGGACGCCTGGTTCTAG

Upstream 100 bases:

>100_bases
GGAGGTCGCCCGTGTTGACGCTCCATCAGTGCAATGGATGGAGCTAGGCAATGGAAAACGGGCGTCCTTAGACTCGGGCC
GATAGAAATGGAGGTTGACC

Downstream 100 bases:

>100_bases
CCCACTGGAGATATTGTTACAACGCCCCGCCGATGCGGGGCGTTTTTTGACAGCCCGTCAAATCATCAGGTTAGAATCGC
TGGCATATCCCGTGCATGGG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MTETLLCPRNLAFELYEVLDAEALTRRERFADHSRETFDAAIGTARSIAEKYFAPHNRKSDEHEPVYQNGEAVLIPEVKP
AVDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSANIATSSYPMLSMGASHLIETFGSEEQKRRFLQPMLEGRFFG
TMALTEPHAGSSLSDIRTRAEPAGDGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDG
SLGERNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMGAIMLGYAGYLYSLNYA
RERPQGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAFDLGLYSARLVDDEHTAESEEARRSAAELLDLLTPIVKS
WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLIGLIQDCCQRAA
EYDSLGALRQPLEQHVARLTSVTQALLGDLMAGKVNQALANSALYLKVFGHAVIGWRWLEQALRAERGLAEGNPADADFY
RGKLQAARYFLTWEVPACAHELALLEARDDTCLGMQDAWF

Sequences:

>Translated_600_residues
MTETLLCPRNLAFELYEVLDAEALTRRERFADHSRETFDAAIGTARSIAEKYFAPHNRKSDEHEPVYQNGEAVLIPEVKP
AVDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSANIATSSYPMLSMGASHLIETFGSEEQKRRFLQPMLEGRFFG
TMALTEPHAGSSLSDIRTRAEPAGDGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDG
SLGERNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMGAIMLGYAGYLYSLNYA
RERPQGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAFDLGLYSARLVDDEHTAESEEARRSAAELLDLLTPIVKS
WPSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLIGLIQDCCQRAA
EYDSLGALRQPLEQHVARLTSVTQALLGDLMAGKVNQALANSALYLKVFGHAVIGWRWLEQALRAERGLAEGNPADADFY
RGKLQAARYFLTWEVPACAHELALLEARDDTCLGMQDAWF
>Mature_599_residues
TETLLCPRNLAFELYEVLDAEALTRRERFADHSRETFDAAIGTARSIAEKYFAPHNRKSDEHEPVYQNGEAVLIPEVKPA
VDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSANIATSSYPMLSMGASHLIETFGSEEQKRRFLQPMLEGRFFGT
MALTEPHAGSSLSDIRTRAEPAGDGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDGS
LGERNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIGVGMGAIMLGYAGYLYSLNYAR
ERPQGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEGAFDLGLYSARLVDDEHTAESEEARRSAAELLDLLTPIVKSW
PSEFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLIGLIQDCCQRAAE
YDSLGALRQPLEQHVARLTSVTQALLGDLMAGKVNQALANSALYLKVFGHAVIGWRWLEQALRAERGLAEGNPADADFYR
GKLQAARYFLTWEVPACAHELALLEARDDTCLGMQDAWF

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=373, Percent_Identity=26.5415549597855, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI4501857, Length=326, Percent_Identity=30.3680981595092, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI4557233, Length=350, Percent_Identity=30.5714285714286, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI4501859, Length=348, Percent_Identity=28.1609195402299, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI21361497, Length=313, Percent_Identity=28.7539936102236, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI226958412, Length=315, Percent_Identity=25.3968253968254, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI226958414, Length=316, Percent_Identity=26.2658227848101, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI187960098, Length=313, Percent_Identity=27.4760383386581, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4557231, Length=313, Percent_Identity=27.4760383386581, Blast_Score=84, Evalue=4e-16,
Organism=Escherichia coli, GI87082384, Length=308, Percent_Identity=30.5194805194805, Blast_Score=97, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17533517, Length=451, Percent_Identity=27.4944567627494, Blast_Score=115, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=422, Percent_Identity=25.3554502369668, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=320, Percent_Identity=27.8125, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=322, Percent_Identity=28.2608695652174, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=327, Percent_Identity=27.82874617737, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=318, Percent_Identity=27.9874213836478, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=404, Percent_Identity=27.4752475247525, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71985184, Length=482, Percent_Identity=25.5186721991701, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17505929, Length=430, Percent_Identity=24.6511627906977, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=261, Percent_Identity=28.735632183908, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86563383, Length=295, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=295, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71990804, Length=190, Percent_Identity=30, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=359, Percent_Identity=29.8050139275766, Blast_Score=110, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24660351, Length=388, Percent_Identity=28.0927835051546, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24666513, Length=322, Percent_Identity=27.9503105590062, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24646207, Length=328, Percent_Identity=28.9634146341463, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281363737, Length=364, Percent_Identity=27.1978021978022, Blast_Score=79, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 66396; Mature: 66265

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETLLCPRNLAFELYEVLDAEALTRRERFADHSRETFDAAIGTARSIAEKYFAPHNRKS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DEHEPVYQNGEAVLIPEVKPAVDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSAN
CCCCCHHCCCCEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
IATSSYPMLSMGASHLIETFGSEEQKRRFLQPMLEGRFFGTMALTEPHAGSSLSDIRTRA
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHC
EPAGDGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDG
CCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCC
SLGERNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIG
CCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
VGMGAIMLGYAGYLYSLNYARERPQGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCC
AFDLGLYSARLVDDEHTAESEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGH
HHHHHHHHHEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
GYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLIGLIQDCCQRAA
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EYDSLGALRQPLEQHVARLTSVTQALLGDLMAGKVNQALANSALYLKVFGHAVIGWRWLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
QALRAERGLAEGNPADADFYRGKLQAARYFLTWEVPACAHELALLEARDDTCLGMQDAWF
HHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHCCC
>Mature Secondary Structure 
TETLLCPRNLAFELYEVLDAEALTRRERFADHSRETFDAAIGTARSIAEKYFAPHNRKS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DEHEPVYQNGEAVLIPEVKPAVDAFIEAGFHNAQRSFDDGGMQLPNLLSRACFAHFQSAN
CCCCCHHCCCCEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
IATSSYPMLSMGASHLIETFGSEEQKRRFLQPMLEGRFFGTMALTEPHAGSSLSDIRTRA
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHC
EPAGDGSYRLKGNKIFISGGDHPLSENIVHMVLAKLPDAPPGVKGISLFIVPKFLVNDDG
CCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCC
SLGERNDVLLAGLFHKMGWRGTTSTALNFGDNGNCVGYLVGEPHKGLAYMFQMMNEARIG
CCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
VGMGAIMLGYAGYLYSLNYARERPQGRLPDGKDPASTQVPIIEHTDVKRMLLTQKAYVEG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCC
AFDLGLYSARLVDDEHTAESEEARRSAAELLDLLTPIVKSWPSEFCLKANELAIQILGGH
HHHHHHHHHEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
GYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLMQNKGAGLRQLIGLIQDCCQRAA
CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EYDSLGALRQPLEQHVARLTSVTQALLGDLMAGKVNQALANSALYLKVFGHAVIGWRWLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
QALRAERGLAEGNPADADFYRGKLQAARYFLTWEVPACAHELALLEARDDTCLGMQDAWF
HHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHHHHCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]