| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146284117
Identifier: 146284117
GI number: 146284117
Start: 4114372
End: 4116081
Strand: Direct
Name: 146284117
Synonym: PST_3804
Alternate gene names: NA
Gene position: 4114372-4116081 (Clockwise)
Preceding gene: 146284115
Following gene: 146284127
Centisome position: 90.08
GC content: 66.02
Gene sequence:
>1710_bases ATGGCAGGCAATGAAGGCCGGCATTCTACATCAGCTGGCAAGGGGGCTGGACAGCCGCCACCGCCTCCGCACGCGCAGCG CCGGCGGCGCAATTCGTCAGCTTACCGTTGCAGACCTTTAGCGCCCCCCGCGCTATCCGTATACTGCTCGGCAATTTCCC GACGAGAAGAGCCGCGCTCTGTGAACCGGCCCGCATCCGTAAAGCCAGACAACTTCTTCCTCATGCTCTATCGCGCCGTG CGCCAGCACCGCGTGCCGCTGGTGTTGCGCATCGCCGCCCATACGCTGCTGCTGGTGGCGTTGGCGCTGATCATCTACGC CTGGGTGATCGGCATGCAGTTCAAGCACGCCATGGCGCAGCAGGCCGATGCCCTCGGCCAGAGCCTGGTCACGCAGACTG CCGCCTCGGCCACAGATCTGCTGGTGGCCAACGACATCCTCAGCCTGAACGTGCTGCTGAGCAATCTGGTGAAGAATCCG CTGGTCGCCCACGCGGCGATCTACAGCGTCGACAACCGCGTGCTGGCGGAGTCCGGCACGCGCCCGCAGAAGGGCCTGCT CGGCGATGACAGCGGCCTTTATTCGACCCCGATCAGCTTCCAGGAGGTAATCGCCGGCCACCTGCGCGTCAGCCTCGACA TGCAGCAGTTCCAGCAGCCGATGACCATCAGCCTGCAGAGCATGGGCCTGCTCAGCCTGATCCTGCTGGCCCTGACGCTG ATGCTGAGCCTGCGCCTCGGCCGCCAACTGGCGACACCGTTGATGCAGATGCGCCTCTGGCTGCGCGATCCGGATGATCC TGCGCCGGGTGCCGGGCGCCAGGACGAGATCGGTGACCTTGCGCGCCAGTTGCAGGCACGGCTGGTGCCGGAAAAGCCCG AGCCGGAACTCGACCTCAGCGATGCGCTGGATGACGACTATTTCGAGCGGGATGATGATCGCGCCATCCCGCAGCGCACG CAATCTCGCCCCGAACGCTTCGACATTGATCTGGACGATGACGAGCCGCAGCGCCCGGCACGACTGTCGGCCAACTTCGA CGACGACGAACTGGAGATCGCCGACGACGAACCGCCATTCGATAGCCCGACGCCAGCCAGCAGCGCGCCGCAGCCTAGCG TTCCGCGTTCGACCCGTAGTGCCGTGCTGGCCATCCAGCTCGGCGCCCAGGACCAGCTGCGCCGCCTGCCGCGGCCTCGC CTGACCGAGCTGCTGCAGCGCTACCGCGATTGCCTGCAACAGGCCGCCACGCTCTACCAGGCCGAGCTGCACACGCTCAA CGACGGCAGCAGCCTGATGCTGTTCCACAGCCAGGACGACGAGCAGAACTACCTGACCCATGCGATCTGCTGTGGCGAGC TGATGCGCGCGCTGGCCCATGCACTGCAGATCGACGTCGCCGACAGCGGCATCACGCTGCAGCTGCAACTGGGCCTGACC CAGGGCGATGGCCTGTTCGACCTGAGCCAGGGCGACCTCTTGCTCAGCGAGCCGGCACAGGCGGCACTGGACATGTCGCT GCACAGCCGCAACCTGTTGCTGGTCGAAAGCAGCATCAGCGAAGACCGGCTTATCCAGCAACGCGCCCGCATCCGCCCGA TCGCCAGCCCCGAAGGTGCCTGCTGCGTCGAGCGCCTGCTGGACCCCTACCCTTCTTTGCTGGAACGCCAACTGGCCCGG ATGCACGAGCTGCGCAGCCGCACCTACTGA
Upstream 100 bases:
>100_bases CGCCACCCTGGGCGAGCACGCCGGTAATGGCCGCGGTCAGGCCCGGGCGATCTTCACCGGTGATATTGATCAGGACGATT TCGCGCAAGGCGCAGCTCCC
Downstream 100 bases:
>100_bases CGCGCTCGCGGGCGAGCGCCCGCTGCCAGCAAGACGGGCTGACGATTGGCGAACGCGGCAGTGCATCTCGCCGACGCCTC CTCCACCCGCAAAAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: HAMP Domain-Containing Protein; Histidine Kinase HAMP Region
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MAGNEGRHSTSAGKGAGQPPPPPHAQRRRRNSSAYRCRPLAPPALSVYCSAISRREEPRSVNRPASVKPDNFFLMLYRAV RQHRVPLVLRIAAHTLLLVALALIIYAWVIGMQFKHAMAQQADALGQSLVTQTAASATDLLVANDILSLNVLLSNLVKNP LVAHAAIYSVDNRVLAESGTRPQKGLLGDDSGLYSTPISFQEVIAGHLRVSLDMQQFQQPMTISLQSMGLLSLILLALTL MLSLRLGRQLATPLMQMRLWLRDPDDPAPGAGRQDEIGDLARQLQARLVPEKPEPELDLSDALDDDYFERDDDRAIPQRT QSRPERFDIDLDDDEPQRPARLSANFDDDELEIADDEPPFDSPTPASSAPQPSVPRSTRSAVLAIQLGAQDQLRRLPRPR LTELLQRYRDCLQQAATLYQAELHTLNDGSSLMLFHSQDDEQNYLTHAICCGELMRALAHALQIDVADSGITLQLQLGLT QGDGLFDLSQGDLLLSEPAQAALDMSLHSRNLLLVESSISEDRLIQQRARIRPIASPEGACCVERLLDPYPSLLERQLAR MHELRSRTY
Sequences:
>Translated_569_residues MAGNEGRHSTSAGKGAGQPPPPPHAQRRRRNSSAYRCRPLAPPALSVYCSAISRREEPRSVNRPASVKPDNFFLMLYRAV RQHRVPLVLRIAAHTLLLVALALIIYAWVIGMQFKHAMAQQADALGQSLVTQTAASATDLLVANDILSLNVLLSNLVKNP LVAHAAIYSVDNRVLAESGTRPQKGLLGDDSGLYSTPISFQEVIAGHLRVSLDMQQFQQPMTISLQSMGLLSLILLALTL MLSLRLGRQLATPLMQMRLWLRDPDDPAPGAGRQDEIGDLARQLQARLVPEKPEPELDLSDALDDDYFERDDDRAIPQRT QSRPERFDIDLDDDEPQRPARLSANFDDDELEIADDEPPFDSPTPASSAPQPSVPRSTRSAVLAIQLGAQDQLRRLPRPR LTELLQRYRDCLQQAATLYQAELHTLNDGSSLMLFHSQDDEQNYLTHAICCGELMRALAHALQIDVADSGITLQLQLGLT QGDGLFDLSQGDLLLSEPAQAALDMSLHSRNLLLVESSISEDRLIQQRARIRPIASPEGACCVERLLDPYPSLLERQLAR MHELRSRTY >Mature_568_residues AGNEGRHSTSAGKGAGQPPPPPHAQRRRRNSSAYRCRPLAPPALSVYCSAISRREEPRSVNRPASVKPDNFFLMLYRAVR QHRVPLVLRIAAHTLLLVALALIIYAWVIGMQFKHAMAQQADALGQSLVTQTAASATDLLVANDILSLNVLLSNLVKNPL VAHAAIYSVDNRVLAESGTRPQKGLLGDDSGLYSTPISFQEVIAGHLRVSLDMQQFQQPMTISLQSMGLLSLILLALTLM LSLRLGRQLATPLMQMRLWLRDPDDPAPGAGRQDEIGDLARQLQARLVPEKPEPELDLSDALDDDYFERDDDRAIPQRTQ SRPERFDIDLDDDEPQRPARLSANFDDDELEIADDEPPFDSPTPASSAPQPSVPRSTRSAVLAIQLGAQDQLRRLPRPRL TELLQRYRDCLQQAATLYQAELHTLNDGSSLMLFHSQDDEQNYLTHAICCGELMRALAHALQIDVADSGITLQLQLGLTQ GDGLFDLSQGDLLLSEPAQAALDMSLHSRNLLLVESSISEDRLIQQRARIRPIASPEGACCVERLLDPYPSLLERQLARM HELRSRTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63086; Mature: 62954
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNEGRHSTSAGKGAGQPPPPPHAQRRRRNSSAYRCRPLAPPALSVYCSAISRREEPRS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCC VNRPASVKPDNFFLMLYRAVRQHRVPLVLRIAAHTLLLVALALIIYAWVIGMQFKHAMAQ CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QADALGQSLVTQTAASATDLLVANDILSLNVLLSNLVKNPLVAHAAIYSVDNRVLAESGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCC RPQKGLLGDDSGLYSTPISFQEVIAGHLRVSLDMQQFQQPMTISLQSMGLLSLILLALTL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECHHHCCCCCEEEHHHHHHHHHHHHHHHH MLSLRLGRQLATPLMQMRLWLRDPDDPAPGAGRQDEIGDLARQLQARLVPEKPEPELDLS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH DALDDDYFERDDDRAIPQRTQSRPERFDIDLDDDEPQRPARLSANFDDDELEIADDEPPF HHCCCHHHCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCEECCCCCCCCEEECCCCCCC DSPTPASSAPQPSVPRSTRSAVLAIQLGAQDQLRRLPRPRLTELLQRYRDCLQQAATLYQ CCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AELHTLNDGSSLMLFHSQDDEQNYLTHAICCGELMRALAHALQIDVADSGITLQLQLGLT HHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEECC QGDGLFDLSQGDLLLSEPAQAALDMSLHSRNLLLVESSISEDRLIQQRARIRPIASPEGA CCCCEEECCCCCEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHH CCVERLLDPYPSLLERQLARMHELRSRTY HHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGNEGRHSTSAGKGAGQPPPPPHAQRRRRNSSAYRCRPLAPPALSVYCSAISRREEPRS CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCCCC VNRPASVKPDNFFLMLYRAVRQHRVPLVLRIAAHTLLLVALALIIYAWVIGMQFKHAMAQ CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QADALGQSLVTQTAASATDLLVANDILSLNVLLSNLVKNPLVAHAAIYSVDNRVLAESGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCCC RPQKGLLGDDSGLYSTPISFQEVIAGHLRVSLDMQQFQQPMTISLQSMGLLSLILLALTL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECHHHCCCCCEEEHHHHHHHHHHHHHHHH MLSLRLGRQLATPLMQMRLWLRDPDDPAPGAGRQDEIGDLARQLQARLVPEKPEPELDLS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH DALDDDYFERDDDRAIPQRTQSRPERFDIDLDDDEPQRPARLSANFDDDELEIADDEPPF HHCCCHHHCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCEECCCCCCCCEEECCCCCCC DSPTPASSAPQPSVPRSTRSAVLAIQLGAQDQLRRLPRPRLTELLQRYRDCLQQAATLYQ CCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AELHTLNDGSSLMLFHSQDDEQNYLTHAICCGELMRALAHALQIDVADSGITLQLQLGLT HHHHEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEECC QGDGLFDLSQGDLLLSEPAQAALDMSLHSRNLLLVESSISEDRLIQQRARIRPIASPEGA CCCCEEECCCCCEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHH CCVERLLDPYPSLLERQLARMHELRSRTY HHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA