Click here to switch to the map view.

The map label for this gene is bphP [H]

Identifier: 146284042

GI number: 146284042

Start: 4033494

End: 4034675

Strand: Direct

Name: bphP [H]

Synonym: PST_3730

Alternate gene names: 146284042

Gene position: 4033494-4034675 (Clockwise)

Preceding gene: 146284041

Following gene: 146284044

Centisome position: 88.31

GC content: 65.99

Gene sequence:

>1182_bases
ATGGTGCGATCCATCCTCGACGACCTGCTCACCGTCCAGCGCATCAGCGCCGTCCCGGCCATCCTGCAGGTGGTCAGCGA
AACCACCGGCCTGCGCTTCGCTGCGGTCGCCCGCGTCACCGAGTCGAACTGGACCGCCTGCGCCGTGCTCGATCGCATCG
AGTTCGGCCTGAAGGTCGGCGGCGAGCTGGACATCACGACCACGCTGTGCAGCGAGATCCACGCCTCGCACCAGCCAATC
ATCATCAGCCAGGTCAGTGCCGACCCCGATTACTGCAACCACCACACACCGCAGATGTATGGCTTCGAAAGCTATATCTC
GGTGCCGGTGCTGCGCGCCGACGGTAGTTTCTTCGGCACGCTCTGTGCGCTCGATCCACTGCCACGCGACCTGTCCAGCC
CGGCAACGCGGGCAATGTTCGAATCCTTCGCGCGCCTGCTGACCCTGCAGATCGAAGCCGAGGAGCAGCAGCAGGCCACC
CGTGCAGCGTTGGCCGACGAGCGCATCACTGGCCACCAGCGCGAGCAGTTCATCGCCCTGCTCGGGCACGACCTGCGCAC
CCCGCTCGCCTCGATCCAGGCGGCCAGCGATCTGCTGGTCCGGCGCTCGACGGAACGCGGCACGCAGCAGCTCGCCGAGC
ATGTGCGCACGTCCAGCCAGCGCGCCTCGCGCATGGTCGATGATCTGATGGATTTCGCGCGCGGCCAGCTGGGCAATGGC
ATACCGCTGAACTGGACCGCCGCAGCCAACCTGCATCTCACGCTGATGCAGGTGGTCACCGAACTGCGCACCGCCCATCC
ACGCCGAGTCATTCTCGAACAGCTGCCAGAGCTGCCGGTGTTCGAATGCGACCCGGACCGGATCGCCCAGCTGCTGGCCA
ACCTGATCACCAACGCGCTGCACCATGGCGCCAGCACTGGTCCGGTGATCGTGAAGGCCGAGGTGATCGACGAGCACTTC
CAGCTGGCGGTGCACAATCGCGGCACGCCAATCCCGGCGCAACGGCTGGGACGACTGTTCCATGCCTATTCCCAGGAAGA
CGACACCTCGCGCAACGGGCTTGGACTGGGGCTGTTCATCGTTGACCAGGTGGCCAAAGCCCATGGCGGCGGCATGCAGG
TAACCTCCAGCGCCGAGGCCGGTACCACCTTCACCTTCCGCATGCCGCTGCAGCGCGCCTGA

Upstream 100 bases:

>100_bases
CCGGCGCGGCGCAACCCGCTCCGCTCGGCTGAGCGCCGCCTGCAGAAGAGGTCGGCCATGTTAAAGTGGCCGGCCTTTTT
TCGCCGCTCAGGGCCTGCAG

Downstream 100 bases:

>100_bases
TCAGCGCAGCTGGCTGTCCTTGCTGCCACGGCGGTTATAGCCGCTGAACCTGGCGTCTTCCTTGTCCTGCTCGGCCTGGC
ACTTGATGCACAGGCGAACG

Product: sensor histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MVRSILDDLLTVQRISAVPAILQVVSETTGLRFAAVARVTESNWTACAVLDRIEFGLKVGGELDITTTLCSEIHASHQPI
IISQVSADPDYCNHHTPQMYGFESYISVPVLRADGSFFGTLCALDPLPRDLSSPATRAMFESFARLLTLQIEAEEQQQAT
RAALADERITGHQREQFIALLGHDLRTPLASIQAASDLLVRRSTERGTQQLAEHVRTSSQRASRMVDDLMDFARGQLGNG
IPLNWTAAANLHLTLMQVVTELRTAHPRRVILEQLPELPVFECDPDRIAQLLANLITNALHHGASTGPVIVKAEVIDEHF
QLAVHNRGTPIPAQRLGRLFHAYSQEDDTSRNGLGLGLFIVDQVAKAHGGGMQVTSSAEAGTTFTFRMPLQRA

Sequences:

>Translated_393_residues
MVRSILDDLLTVQRISAVPAILQVVSETTGLRFAAVARVTESNWTACAVLDRIEFGLKVGGELDITTTLCSEIHASHQPI
IISQVSADPDYCNHHTPQMYGFESYISVPVLRADGSFFGTLCALDPLPRDLSSPATRAMFESFARLLTLQIEAEEQQQAT
RAALADERITGHQREQFIALLGHDLRTPLASIQAASDLLVRRSTERGTQQLAEHVRTSSQRASRMVDDLMDFARGQLGNG
IPLNWTAAANLHLTLMQVVTELRTAHPRRVILEQLPELPVFECDPDRIAQLLANLITNALHHGASTGPVIVKAEVIDEHF
QLAVHNRGTPIPAQRLGRLFHAYSQEDDTSRNGLGLGLFIVDQVAKAHGGGMQVTSSAEAGTTFTFRMPLQRA
>Mature_393_residues
MVRSILDDLLTVQRISAVPAILQVVSETTGLRFAAVARVTESNWTACAVLDRIEFGLKVGGELDITTTLCSEIHASHQPI
IISQVSADPDYCNHHTPQMYGFESYISVPVLRADGSFFGTLCALDPLPRDLSSPATRAMFESFARLLTLQIEAEEQQQAT
RAALADERITGHQREQFIALLGHDLRTPLASIQAASDLLVRRSTERGTQQLAEHVRTSSQRASRMVDDLMDFARGQLGNG
IPLNWTAAANLHLTLMQVVTELRTAHPRRVILEQLPELPVFECDPDRIAQLLANLITNALHHGASTGPVIVKAEVIDEHF
QLAVHNRGTPIPAQRLGRLFHAYSQEDDTSRNGLGLGLFIVDQVAKAHGGGMQVTSSAEAGTTFTFRMPLQRA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=26.953125, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786912, Length=278, Percent_Identity=28.4172661870504, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082128, Length=227, Percent_Identity=27.3127753303965, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081816, Length=240, Percent_Identity=25.8333333333333, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790861, Length=217, Percent_Identity=27.6497695852535, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=26.8722466960352, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789149, Length=262, Percent_Identity=28.2442748091603, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI48994928, Length=228, Percent_Identity=29.3859649122807, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1790346, Length=228, Percent_Identity=25.8771929824561, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788713, Length=249, Percent_Identity=24.0963855421687, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=24.7826086956522, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=28.3842794759825, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789808, Length=228, Percent_Identity=25.4385964912281, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 43088; Mature: 43088

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSILDDLLTVQRISAVPAILQVVSETTGLRFAAVARVTESNWTACAVLDRIEFGLKVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
GELDITTTLCSEIHASHQPIIISQVSADPDYCNHHTPQMYGFESYISVPVLRADGSFFGT
CCEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCHHHH
LCALDPLPRDLSSPATRAMFESFARLLTLQIEAEEQQQATRAALADERITGHQREQFIAL
HHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LGHDLRTPLASIQAASDLLVRRSTERGTQQLAEHVRTSSQRASRMVDDLMDFARGQLGNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IPLNWTAAANLHLTLMQVVTELRTAHPRRVILEQLPELPVFECDPDRIAQLLANLITNAL
CCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHH
HHGASTGPVIVKAEVIDEHFQLAVHNRGTPIPAQRLGRLFHAYSQEDDTSRNGLGLGLFI
HCCCCCCCEEEEHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHH
VDQVAKAHGGGMQVTSSAEAGTTFTFRMPLQRA
HHHHHHHCCCCEEEECCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MVRSILDDLLTVQRISAVPAILQVVSETTGLRFAAVARVTESNWTACAVLDRIEFGLKVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
GELDITTTLCSEIHASHQPIIISQVSADPDYCNHHTPQMYGFESYISVPVLRADGSFFGT
CCEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCHHHH
LCALDPLPRDLSSPATRAMFESFARLLTLQIEAEEQQQATRAALADERITGHQREQFIAL
HHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LGHDLRTPLASIQAASDLLVRRSTERGTQQLAEHVRTSSQRASRMVDDLMDFARGQLGNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IPLNWTAAANLHLTLMQVVTELRTAHPRRVILEQLPELPVFECDPDRIAQLLANLITNAL
CCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHH
HHGASTGPVIVKAEVIDEHFQLAVHNRGTPIPAQRLGRLFHAYSQEDDTSRNGLGLGLFI
HCCCCCCCEEEEHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHH
VDQVAKAHGGGMQVTSSAEAGTTFTFRMPLQRA
HHHHHHHCCCCEEEECCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]