| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is 146283828
Identifier: 146283828
GI number: 146283828
Start: 3801613
End: 3801996
Strand: Direct
Name: 146283828
Synonym: PST_3511
Alternate gene names: NA
Gene position: 3801613-3801996 (Clockwise)
Preceding gene: 146283827
Following gene: 146283833
Centisome position: 83.23
GC content: 67.19
Gene sequence:
>384_bases ATGACCGTCACCCCCATCCCCCTGGTCTATTCCTGTTCCGGCTGCTCGAACGTCGCCCAGCTGGCCAACACGCTGGCCGT CCGCCTCGACCGCGCCGGGCTCGCGGAAATGTCCTGCATCGCCGGCGTCGGCGGCCGCGTCGCGGCGCTGGTGAAGAAGG CCCACTCCGGACGACCGATCCTGGCCATCGACGGCTGCCCGATGCACTGCGCCCGCGCCTGCCTGGCACAGCACGGCGTG ATGCCCGATGTGCACATCACCCTCAGCAGCTACGGTCTGCGCAAGCGGTATCGGGAAGACTGCAGCGAGGAAGAGATCGC GGCGCTGTTCGAGGACATGAAACAGATCATCGCCAGCGACCGCATGCAGATGCGCGCTGTGTGA
Upstream 100 bases:
>100_bases TCGGCGCATCGAGATCCTCGACAACCGCAAGCTGGCCGCCTATGACGAATGACCCGCGGCATGTCCGCCCGCCAACCCAC ACCACTGCCGGGAGCGCGCG
Downstream 100 bases:
>100_bases CATCTGCCGAAGCTGACGCTGGCCCGATCAATCCGGGCCAGCGCAACGAGATCACGGTTTGCAGGTGGGCCGAAGCCACC GTTCGTGCCAACGAGCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: DGC Domain-Containing Protein; Lipoprotein; DGC Domain Superfamily; Dgc Domain Protein; Lipoprotein COG
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTVTPIPLVYSCSGCSNVAQLANTLAVRLDRAGLAEMSCIAGVGGRVAALVKKAHSGRPILAIDGCPMHCARACLAQHGV MPDVHITLSSYGLRKRYREDCSEEEIAALFEDMKQIIASDRMQMRAV
Sequences:
>Translated_127_residues MTVTPIPLVYSCSGCSNVAQLANTLAVRLDRAGLAEMSCIAGVGGRVAALVKKAHSGRPILAIDGCPMHCARACLAQHGV MPDVHITLSSYGLRKRYREDCSEEEIAALFEDMKQIIASDRMQMRAV >Mature_126_residues TVTPIPLVYSCSGCSNVAQLANTLAVRLDRAGLAEMSCIAGVGGRVAALVKKAHSGRPILAIDGCPMHCARACLAQHGVM PDVHITLSSYGLRKRYREDCSEEEIAALFEDMKQIIASDRMQMRAV
Specific function: Unknown
COG id: COG4273
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13661; Mature: 13530
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTPIPLVYSCSGCSNVAQLANTLAVRLDRAGLAEMSCIAGVGGRVAALVKKAHSGRPI CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCE LAIDGCPMHCARACLAQHGVMPDVHITLSSYGLRKRYREDCSEEEIAALFEDMKQIIASD EEECCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RMQMRAV HHHHCCC >Mature Secondary Structure TVTPIPLVYSCSGCSNVAQLANTLAVRLDRAGLAEMSCIAGVGGRVAALVKKAHSGRPI CCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCE LAIDGCPMHCARACLAQHGVMPDVHITLSSYGLRKRYREDCSEEEIAALFEDMKQIIASD EEECCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RMQMRAV HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA