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The map label for this gene is yigM [C]

Identifier: 146283348

GI number: 146283348

Start: 3251148

End: 3252002

Strand: Direct

Name: yigM [C]

Synonym: PST_3018

Alternate gene names: 146283348

Gene position: 3251148-3252002 (Clockwise)

Preceding gene: 146283347

Following gene: 146283349

Centisome position: 71.18

GC content: 64.33

Gene sequence:

>855_bases
ATGCGCTATCTGATCTTCGTCACCCTGCTCTGGGCCTTTTCCTTCAACCTGATCGGCGTTTACCTGGCCGGCCAGGTGGA
CAGCTATTTCGCCGTGCTAACGCGGGTAGTTCTCGCCGGGCTGGTGTTCCTGCCATTTACCCGCTGGCGCGGTGTCGCGC
CCGGCTTCATCGTCGGCGTGACCCTGGTCGGTGCGCTGCAGTTCGGCGTCACCTACCTGTGCCTGTACCTGAGCTTCAAC
GTGCTGACGGTGGCCGAGGTGCTGCTCTTCACCGTGCTCACGCCGCTGCACGTGACGCTGATCGATGACGCGCTCAACCG
CCGCTTCAACCCCTGGGCACTGGTCGCCGCGGCCGTCGCAGTGTTCGGCGCCGGACTTATCCGTTACGACGGCGTTTCCG
GCGATTTTCTCGGCGGCTTCCTGCTCATGCAGCTGGCCAACTTCACCTTTGCTGCCGGCCAAGTGGCCTACAAGCATCTG
GCGCAGCGTTACCCCTCCGACGTACCGCTGCATCGTCGCTTCGGCTACTTCTTCCTCGGCGCGCTGCTGATCGTGCTGCC
GGCGTGGCTGCTGTTCGGTAACGTCGAGAAACTGCCGACCACCACGACGCAGTGGTCGGTACTGATCTGGATGGGGGTGC
TGGCCACCGCCCTGGGCCAGTTCTGCTGGAACAAGGGCGCCACGCTGGTGGATGCCGGCACCCTGGCGGTGATGAACAAC
ATGGCCGTGCCGGTGGGCCTGGTGCTCAACCTGCTGTTCTGGGGCACCACGACCAACCTGCTGCTGCTCGCGGTCGGCGG
GACGATCATTCTCGCCTCCCTGCAGATCAACCGCCCGGGCCATATGAAGGCCTGA

Upstream 100 bases:

>100_bases
AGGCGGCCTGATCGTTCGGCTGGCGAGCCCGCAGGCGCGCCAGCCCTTCCCTCTTTCATGCGCAGCCGCTAAGGTCGCCC
GCCTTCGTCGTGGAGGCGGC

Downstream 100 bases:

>100_bases
TGACATCATGCAAGTCTTTGTTTTTTATGACTTTTACTTAACTGAAAGGTAAGATGCCGGCCCGCGCACGGATGCGACAC
TCGTTCAGTTGTCGAGAATT

Product: carboxylate/amino acid/amine transporter, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRYLIFVTLLWAFSFNLIGVYLAGQVDSYFAVLTRVVLAGLVFLPFTRWRGVAPGFIVGVTLVGALQFGVTYLCLYLSFN
VLTVAEVLLFTVLTPLHVTLIDDALNRRFNPWALVAAAVAVFGAGLIRYDGVSGDFLGGFLLMQLANFTFAAGQVAYKHL
AQRYPSDVPLHRRFGYFFLGALLIVLPAWLLFGNVEKLPTTTTQWSVLIWMGVLATALGQFCWNKGATLVDAGTLAVMNN
MAVPVGLVLNLLFWGTTTNLLLLAVGGTIILASLQINRPGHMKA

Sequences:

>Translated_284_residues
MRYLIFVTLLWAFSFNLIGVYLAGQVDSYFAVLTRVVLAGLVFLPFTRWRGVAPGFIVGVTLVGALQFGVTYLCLYLSFN
VLTVAEVLLFTVLTPLHVTLIDDALNRRFNPWALVAAAVAVFGAGLIRYDGVSGDFLGGFLLMQLANFTFAAGQVAYKHL
AQRYPSDVPLHRRFGYFFLGALLIVLPAWLLFGNVEKLPTTTTQWSVLIWMGVLATALGQFCWNKGATLVDAGTLAVMNN
MAVPVGLVLNLLFWGTTTNLLLLAVGGTIILASLQINRPGHMKA
>Mature_284_residues
MRYLIFVTLLWAFSFNLIGVYLAGQVDSYFAVLTRVVLAGLVFLPFTRWRGVAPGFIVGVTLVGALQFGVTYLCLYLSFN
VLTVAEVLLFTVLTPLHVTLIDDALNRRFNPWALVAAAVAVFGAGLIRYDGVSGDFLGGFLLMQLANFTFAAGQVAYKHL
AQRYPSDVPLHRRFGYFFLGALLIVLPAWLLFGNVEKLPTTTTQWSVLIWMGVLATALGQFCWNKGATLVDAGTLAVMNN
MAVPVGLVLNLLFWGTTTNLLLLAVGGTIILASLQINRPGHMKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790261, Length=280, Percent_Identity=51.4285714285714, Blast_Score=263, Evalue=7e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30996; Mature: 30996

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHCCHHHHHHHHCCCHHEEEEEEECCCCCCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHCCHHHHHHHHCCCHHEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]