| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is pcbC [H]
Identifier: 146283232
GI number: 146283232
Start: 3119660
End: 3120640
Strand: Direct
Name: pcbC [H]
Synonym: PST_2897
Alternate gene names: 146283232
Gene position: 3119660-3120640 (Clockwise)
Preceding gene: 146283231
Following gene: 146283233
Centisome position: 68.3
GC content: 66.87
Gene sequence:
>981_bases ATGAACGAATCCCTTTGCGCCCGCCATCTCGAAGCCGCCGCGCTGCCGCTGATCGACATCGCCGGGCTGTTTTCTCCCGA TCTCGACGAGCGCGCCGCCGTGGCCGAACGCATCGGTGCGGCCTGTCGCGAGGTCGGTTTCTTCTGTATCGCCAACCACG GCGTCGACGCGGCGCTGCAGCAGGCGGTGTTCGAGCAGGCGCGGGCCTTCTTCGCCCTGCCGGAACCCGGCAAGCGCGCA CTGGACAAGCTGTTCTCGAAGGCCAATCGCGGCTATGAGCCGTTGCGCGGGCAGGTGCTGGAAGCCGGTGCGCCGGCCGA TCTCAAGGAAGGCTTCTACATCGGCGAGGAGCTGGCCGAGGACGACCCGCGGGTACTGGCCGGGCGTTTCAACCACGGTG CCAACCAGTGGCCGAGCGAGCTCGCGGAGTTTCGCCCGACCATGGAGCGCTATCGCGACGCGATGAATGCGCTGGCGAAT CGGCTGATGGGGGCCATCGCGCTGTCGCTGCAACTGCCGGAGGAACATTTCGCCGGCTTCTGCCGCGACTCCATGAGCAC CCTGCGCCTGCTGCATTACCCGCCGCAGCCGGCCAATTCCGCGCCCGGCGAAAAGGGCTGTGGCGCGCATACCGATTTCG GAGGGCTGACGCTGCTTCTGCAGGACGAGAATCCCGGCCTGCAGGTCTGGGATCGTCACAGCAAGAGCTGGATTCACGCG GCCCCTGTGCCCGGCACCTATGTGGTCAATCTGGGCGACATGATCGCCCGCTGGACCAACGACCAGTACCGTTCGACGCT GCACCGGGTGGTCAACATGTCCGGACGCGAGCGCTACAGCGTGCCGTTCTTCTTCAGCGGCAACCCGGACCACGTGGTCG AGTGCCTGCCGACCTGCCTCGCGCCCGGCGAGGCGCCGCGCTACCCCGCGGTGACGGTGGAAGAACACCACCGCGAGATG TACCGGAGGACCTATGGCTGA
Upstream 100 bases:
>100_bases CATCGGCGTGCTCGATATTCTCTGCTTTTGAGTACAAGCGGCGCGCCGGATACTGCGCTCGCCGGTCGCCATTCCGCGGT CGGCAGAGCAGGATCGAGCC
Downstream 100 bases:
>100_bases CATCGTCCTCATCCACGGGGCCTGGGCCGGTAGCTGGGTCTGGGATTCGCTGCAGGATGGCCTGCGCGATGCCGGCCACC GACCGCATGCGGTCGATCTG
Product: oxidoreductase
Products: NA
Alternate protein names: IPNS [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MNESLCARHLEAAALPLIDIAGLFSPDLDERAAVAERIGAACREVGFFCIANHGVDAALQQAVFEQARAFFALPEPGKRA LDKLFSKANRGYEPLRGQVLEAGAPADLKEGFYIGEELAEDDPRVLAGRFNHGANQWPSELAEFRPTMERYRDAMNALAN RLMGAIALSLQLPEEHFAGFCRDSMSTLRLLHYPPQPANSAPGEKGCGAHTDFGGLTLLLQDENPGLQVWDRHSKSWIHA APVPGTYVVNLGDMIARWTNDQYRSTLHRVVNMSGRERYSVPFFFSGNPDHVVECLPTCLAPGEAPRYPAVTVEEHHREM YRRTYG
Sequences:
>Translated_326_residues MNESLCARHLEAAALPLIDIAGLFSPDLDERAAVAERIGAACREVGFFCIANHGVDAALQQAVFEQARAFFALPEPGKRA LDKLFSKANRGYEPLRGQVLEAGAPADLKEGFYIGEELAEDDPRVLAGRFNHGANQWPSELAEFRPTMERYRDAMNALAN RLMGAIALSLQLPEEHFAGFCRDSMSTLRLLHYPPQPANSAPGEKGCGAHTDFGGLTLLLQDENPGLQVWDRHSKSWIHA APVPGTYVVNLGDMIARWTNDQYRSTLHRVVNMSGRERYSVPFFFSGNPDHVVECLPTCLAPGEAPRYPAVTVEEHHREM YRRTYG >Mature_326_residues MNESLCARHLEAAALPLIDIAGLFSPDLDERAAVAERIGAACREVGFFCIANHGVDAALQQAVFEQARAFFALPEPGKRA LDKLFSKANRGYEPLRGQVLEAGAPADLKEGFYIGEELAEDDPRVLAGRFNHGANQWPSELAEFRPTMERYRDAMNALAN RLMGAIALSLQLPEEHFAGFCRDSMSTLRLLHYPPQPANSAPGEKGCGAHTDFGGLTLLLQDENPGLQVWDRHSKSWIHA APVPGTYVVNLGDMIARWTNDQYRSTLHRVVNMSGRERYSVPFFFSGNPDHVVECLPTCLAPGEAPRYPAVTVEEHHREM YRRTYG
Specific function: Removes, in the presence of oxygen, 4 hydrogen atoms from delta-L-(alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV) to form the azetidinone and thiazolidine rings of isopenicillin [H]
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
Organism=Drosophila melanogaster, GI28572124, Length=343, Percent_Identity=27.4052478134111, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI85816264, Length=289, Percent_Identity=27.681660899654, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI24649039, Length=359, Percent_Identity=23.9554317548747, Blast_Score=81, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002057 - InterPro: IPR002283 - InterPro: IPR005123 [H]
Pfam domain/function: PF03171 2OG-FeII_Oxy [H]
EC number: =1.21.3.1 [H]
Molecular weight: Translated: 36146; Mature: 36146
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESLCARHLEAAALPLIDIAGLFSPDLDERAAVAERIGAACREVGFFCIANHGVDAALQ CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHH QAVFEQARAFFALPEPGKRALDKLFSKANRGYEPLRGQVLEAGAPADLKEGFYIGEELAE HHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHCCCCHHHHHCC DDPRVLAGRFNHGANQWPSELAEFRPTMERYRDAMNALANRLMGAIALSLQLPEEHFAGF CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH CRDSMSTLRLLHYPPQPANSAPGEKGCGAHTDFGGLTLLLQDENPGLQVWDRHSKSWIHA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEE APVPGTYVVNLGDMIARWTNDQYRSTLHRVVNMSGRERYSVPFFFSGNPDHVVECLPTCL CCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCCEEECCCHHHHHHHHHHHC APGEAPRYPAVTVEEHHREMYRRTYG CCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNESLCARHLEAAALPLIDIAGLFSPDLDERAAVAERIGAACREVGFFCIANHGVDAALQ CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHH QAVFEQARAFFALPEPGKRALDKLFSKANRGYEPLRGQVLEAGAPADLKEGFYIGEELAE HHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHCCCCHHHHHCC DDPRVLAGRFNHGANQWPSELAEFRPTMERYRDAMNALANRLMGAIALSLQLPEEHFAGF CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH CRDSMSTLRLLHYPPQPANSAPGEKGCGAHTDFGGLTLLLQDENPGLQVWDRHSKSWIHA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEE APVPGTYVVNLGDMIARWTNDQYRSTLHRVVNMSGRERYSVPFFFSGNPDHVVECLPTCL CCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCEECCCEEECCCHHHHHHHHHHHC APGEAPRYPAVTVEEHHREMYRRTYG CCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1956290 [H]