| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is ycsG [H]
Identifier: 146283104
GI number: 146283104
Start: 2990759
End: 2992048
Strand: Direct
Name: ycsG [H]
Synonym: PST_2765
Alternate gene names: 146283104
Gene position: 2990759-2992048 (Clockwise)
Preceding gene: 146283103
Following gene: 146283108
Centisome position: 65.48
GC content: 64.03
Gene sequence:
>1290_bases TTGCCGGGCACTCGCTGCACGGCTGCATTTCCCTACCTGCCCCAACGCCAAGAAAAAAGAAGGTATCCAATGCAACCTAC GCAAGCCGAACGAGCCACACCCTCCCAGCGCAACGTGCTTCGCGGCGCCATCTTCATCATGGCGACGTCGTCCATCGGGC CGGCCTTTCTGACCCAGACCTCGCTGTTCACCGAGAAATACCTGGCGAGCTTCGCCTTTGCCATTCTGGTCTCGCTGCTG ATCGATATCGGCGCCCAGCTCAACATCTGGCGGATCATCACAGTCGCCAACCTGCGCGGCCAGGATGTCGCCAACCGGGT GATCCCCGGCGTCGGCCACCTGATCTCGGCCTTCATCGTGCTTGGCGGCATCGCTTTCAACATCGGCAACATCGGCGGTG CCGGGCTGGCCATGAACGTCATCTTCGGCATCCCGCCGGTGATCGGCTCGCTGATCGCCGCGGTGCTGATCATCGGCATC TTCCTGCTGCGCAATGCCAAGGGCGTAATGGATTCGGTGATGCAGGTGCTGGGTCTGGTGATGCTCTGCATGATCGGCTA CGCCATGCTGCAGTCGAGCCCACCGCTGCTCGAGGCGGTCAATCGCAGCTTCAACCCGGACGATCCGCTGATCCTGTTGC TGCCGATCGTGACACTGGTGGGCGGTACCGTTGGCGGCTACATCTCGTTCTCCGGCGGGCACCGGTTGGTGGAAGCCGGC ATCACTGGCGTCGAGAACGTCAGGCTGGTCACCCGAGCGGCGGTCACCGGCATCGCCACCACCGGCGTTGTGCGCATCTG CCTGTTCCTGGCCGCGCTCGGGGTCGTCAGCCAGGGGCTCAGCCTCGACCCGAGCAACCCTGCCGCTTCGGTGTTCTCCC ACTCGATGGGCACGGTCGGCTACAAGATCTTCGGCGTGGTACTGCTGGCCGCCTCGGTGTCATCGGTGATCGGCGCCGCC TACACCAGCGTCACCTTCATGTACTCGTTGCACGACAGCATCCGCCGCCACAACCAGCGTATGGTGATCGGCTTCATCGC CTGCTCGACGCTCATCTACAGCCTGGTCGGACAGCCGGTGAAGGTTCTGGTGGTGGCGGGCACGCTGAATGCCCTGGTGC TGCCGCTGGCGCTGGGCTGCGTGCTGCTGGCGTCACGCAAGCCGGCAATCGTCGGCGACCGGTATCGCCACCCGACCTGG ATGCTGGTGTTCGGCCTGCTGGCGATGGTGGCCACGGCGGTCGGGGTGGTGATGTCGTTCAACGCCCTGCTGGAATTCTG GCAGTCCTGA
Upstream 100 bases:
>100_bases CCCACGCGCCAGGGCACATGTTCATCACCGACCTGCGCGACGAACAGCTGGGGGTGATCTGACCCGACACGGTTTTGCGC ATAACCAAACAACAACAATC
Downstream 100 bases:
>100_bases CCGCCACGTACGCGAGCGCGATCAGCGCTCGCCGAGCAGCCAGCCGAGCGATACCTCGAACTGGCCGCGTTCGTCGGTGA TGAACAAGGTGCCGTCGCTG
Product: branched chain amino acids transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MPGTRCTAAFPYLPQRQEKRRYPMQPTQAERATPSQRNVLRGAIFIMATSSIGPAFLTQTSLFTEKYLASFAFAILVSLL IDIGAQLNIWRIITVANLRGQDVANRVIPGVGHLISAFIVLGGIAFNIGNIGGAGLAMNVIFGIPPVIGSLIAAVLIIGI FLLRNAKGVMDSVMQVLGLVMLCMIGYAMLQSSPPLLEAVNRSFNPDDPLILLLPIVTLVGGTVGGYISFSGGHRLVEAG ITGVENVRLVTRAAVTGIATTGVVRICLFLAALGVVSQGLSLDPSNPAASVFSHSMGTVGYKIFGVVLLAASVSSVIGAA YTSVTFMYSLHDSIRRHNQRMVIGFIACSTLIYSLVGQPVKVLVVAGTLNALVLPLALGCVLLASRKPAIVGDRYRHPTW MLVFGLLAMVATAVGVVMSFNALLEFWQS
Sequences:
>Translated_429_residues MPGTRCTAAFPYLPQRQEKRRYPMQPTQAERATPSQRNVLRGAIFIMATSSIGPAFLTQTSLFTEKYLASFAFAILVSLL IDIGAQLNIWRIITVANLRGQDVANRVIPGVGHLISAFIVLGGIAFNIGNIGGAGLAMNVIFGIPPVIGSLIAAVLIIGI FLLRNAKGVMDSVMQVLGLVMLCMIGYAMLQSSPPLLEAVNRSFNPDDPLILLLPIVTLVGGTVGGYISFSGGHRLVEAG ITGVENVRLVTRAAVTGIATTGVVRICLFLAALGVVSQGLSLDPSNPAASVFSHSMGTVGYKIFGVVLLAASVSSVIGAA YTSVTFMYSLHDSIRRHNQRMVIGFIACSTLIYSLVGQPVKVLVVAGTLNALVLPLALGCVLLASRKPAIVGDRYRHPTW MLVFGLLAMVATAVGVVMSFNALLEFWQS >Mature_428_residues PGTRCTAAFPYLPQRQEKRRYPMQPTQAERATPSQRNVLRGAIFIMATSSIGPAFLTQTSLFTEKYLASFAFAILVSLLI DIGAQLNIWRIITVANLRGQDVANRVIPGVGHLISAFIVLGGIAFNIGNIGGAGLAMNVIFGIPPVIGSLIAAVLIIGIF LLRNAKGVMDSVMQVLGLVMLCMIGYAMLQSSPPLLEAVNRSFNPDDPLILLLPIVTLVGGTVGGYISFSGGHRLVEAGI TGVENVRLVTRAAVTGIATTGVVRICLFLAALGVVSQGLSLDPSNPAASVFSHSMGTVGYKIFGVVLLAASVSSVIGAAY TSVTFMYSLHDSIRRHNQRMVIGFIACSTLIYSLVGQPVKVLVVAGTLNALVLPLALGCVLLASRKPAIVGDRYRHPTWM LVFGLLAMVATAVGVVMSFNALLEFWQS
Specific function: Unknown
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 45412; Mature: 45281
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTRCTAAFPYLPQRQEKRRYPMQPTQAERATPSQRNVLRGAIFIMATSSIGPAFLTQT CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHH SLFTEKYLASFAFAILVSLLIDIGAQLNIWRIITVANLRGQDVANRVIPGVGHLISAFIV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHH LGGIAFNIGNIGGAGLAMNVIFGIPPVIGSLIAAVLIIGIFLLRNAKGVMDSVMQVLGLV HHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH MLCMIGYAMLQSSPPLLEAVNRSFNPDDPLILLLPIVTLVGGTVGGYISFSGGHRLVEAG HHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCEEEECCCCHHHHHC ITGVENVRLVTRAAVTGIATTGVVRICLFLAALGVVSQGLSLDPSNPAASVFSHSMGTVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH YKIFGVVLLAASVSSVIGAAYTSVTFMYSLHDSIRRHNQRMVIGFIACSTLIYSLVGQPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCE KVLVVAGTLNALVLPLALGCVLLASRKPAIVGDRYRHPTWMLVFGLLAMVATAVGVVMSF EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NALLEFWQS HHHHHHHCC >Mature Secondary Structure PGTRCTAAFPYLPQRQEKRRYPMQPTQAERATPSQRNVLRGAIFIMATSSIGPAFLTQT CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCHHHHHHH SLFTEKYLASFAFAILVSLLIDIGAQLNIWRIITVANLRGQDVANRVIPGVGHLISAFIV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHH LGGIAFNIGNIGGAGLAMNVIFGIPPVIGSLIAAVLIIGIFLLRNAKGVMDSVMQVLGLV HHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH MLCMIGYAMLQSSPPLLEAVNRSFNPDDPLILLLPIVTLVGGTVGGYISFSGGHRLVEAG HHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCEEEECCCCHHHHHC ITGVENVRLVTRAAVTGIATTGVVRICLFLAALGVVSQGLSLDPSNPAASVFSHSMGTVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH YKIFGVVLLAASVSSVIGAAYTSVTFMYSLHDSIRRHNQRMVIGFIACSTLIYSLVGQPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCE KVLVVAGTLNALVLPLALGCVLLASRKPAIVGDRYRHPTWMLVFGLLAMVATAVGVVMSF EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NALLEFWQS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 8969502 [H]