| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
Click here to switch to the map view.
The map label for this gene is 146283103
Identifier: 146283103
GI number: 146283103
Start: 2989923
End: 2990720
Strand: Direct
Name: 146283103
Synonym: PST_2764
Alternate gene names: NA
Gene position: 2989923-2990720 (Clockwise)
Preceding gene: 146283102
Following gene: 146283104
Centisome position: 65.46
GC content: 66.92
Gene sequence:
>798_bases ATGAACCTGACCGCCTACCGAGACCTGTCCCCCGCGGCATTGCGCGAGCGGATTCGCCAGGGCGAATTCGACGGCCCGAC CGCCGGGCTGGCCAATGGCTATGCCCAGGCCAATCTCATGATCGTGCGGCGTGAGCTGGCCTACGACTTCCTGCTGTTCT GCCAGCGCAACCCCAAACCCTGCCCGCTGCTGGACGTCACCGACCCGGGGAGCTTCGAGCCACGGCACGCGGCGCCAGGC GCCGATATCCGCACGGACTTCCCGCGCTACCGCATCTACCGCAATGGCGAACTCGATCAGGAGGTGCAGGACATCACGCC CTTCTGGGAGGACGACATGGTGGCCTTCCTCATCGGCTGCAGCTTCAGTTTCGAGGCTGCACTGCTGGCCAATGGCGTGC CAGTCAGGCACATCGAGGACGGCCACAACGTCCCGATGTACCGCACCAACATCGCCTGCCAGCCCGCCGGCGGCCTGAGC GGGCCGATGGTGGTGAGCATGCGGCCGATGCCTGCGAACAAGGTGGTGCGCGCCGTGCAGGTCACATCGCGATTTCCCTC CGTGCATGGCGCCCCCGTGCATGTCGGCGACCCGCGACTGCTGGGCATTGCAGACCTGGCCAAACCGGATTTCGGTGAGC CATCCGAGCTGCGCGAAGGCGAGGTCCCGGTGTTCTGGGCCTGTGGCGTGACGCCCCAGGCGGTGGCGATGCAGGCCCGG CCGGAGCTGGTCATCACCCACGCGCCAGGGCACATGTTCATCACCGACCTGCGCGACGAACAGCTGGGGGTGATCTGA
Upstream 100 bases:
>100_bases GCACCGTGTTGCGCCTGAAGCCGGTGGCGTTGGAACGCGCACAACGCGAGCAGCGGCGACTGCTCGCCAGCTGGCAACGG ACCACGACGGAGTGATGGAT
Downstream 100 bases:
>100_bases CCCGACACGGTTTTGCGCATAACCAAACAACAACAATCTTGCCGGGCACTCGCTGCACGGCTGCATTTCCCTACCTGCCC CAACGCCAAGAAAAAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MNLTAYRDLSPAALRERIRQGEFDGPTAGLANGYAQANLMIVRRELAYDFLLFCQRNPKPCPLLDVTDPGSFEPRHAAPG ADIRTDFPRYRIYRNGELDQEVQDITPFWEDDMVAFLIGCSFSFEAALLANGVPVRHIEDGHNVPMYRTNIACQPAGGLS GPMVVSMRPMPANKVVRAVQVTSRFPSVHGAPVHVGDPRLLGIADLAKPDFGEPSELREGEVPVFWACGVTPQAVAMQAR PELVITHAPGHMFITDLRDEQLGVI
Sequences:
>Translated_265_residues MNLTAYRDLSPAALRERIRQGEFDGPTAGLANGYAQANLMIVRRELAYDFLLFCQRNPKPCPLLDVTDPGSFEPRHAAPG ADIRTDFPRYRIYRNGELDQEVQDITPFWEDDMVAFLIGCSFSFEAALLANGVPVRHIEDGHNVPMYRTNIACQPAGGLS GPMVVSMRPMPANKVVRAVQVTSRFPSVHGAPVHVGDPRLLGIADLAKPDFGEPSELREGEVPVFWACGVTPQAVAMQAR PELVITHAPGHMFITDLRDEQLGVI >Mature_265_residues MNLTAYRDLSPAALRERIRQGEFDGPTAGLANGYAQANLMIVRRELAYDFLLFCQRNPKPCPLLDVTDPGSFEPRHAAPG ADIRTDFPRYRIYRNGELDQEVQDITPFWEDDMVAFLIGCSFSFEAALLANGVPVRHIEDGHNVPMYRTNIACQPAGGLS GPMVVSMRPMPANKVVRAVQVTSRFPSVHGAPVHVGDPRLLGIADLAKPDFGEPSELREGEVPVFWACGVTPQAVAMQAR PELVITHAPGHMFITDLRDEQLGVI
Specific function: Unknown
COG id: COG4336
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0317 family
Homologues:
Organism=Homo sapiens, GI156139135, Length=258, Percent_Identity=33.7209302325581, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI156139133, Length=258, Percent_Identity=34.1085271317829, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI156139131, Length=258, Percent_Identity=34.1085271317829, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI156139129, Length=258, Percent_Identity=34.1085271317829, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI156139137, Length=258, Percent_Identity=32.1705426356589, Blast_Score=114, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2764_PSEU5 (A4VN63)
Other databases:
- EMBL: CP000304 - RefSeq: YP_001173256.1 - ProteinModelPortal: A4VN63 - STRING: A4VN63 - GeneID: 5095726 - GenomeReviews: CP000304_GR - KEGG: psa:PST_2764 - eggNOG: COG4336 - HOGENOM: HBG289473 - OMA: GPMVVSM - ProtClustDB: PRK05463 - BioCyc: PSTU379731:PST_2764-MONOMER - HAMAP: MF_01830 - InterPro: IPR009906 - InterPro: IPR016938 - PIRSF: PIRSF029755
Pfam domain/function: PF07286 DUF1445
EC number: NA
Molecular weight: Translated: 29174; Mature: 29174
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTAYRDLSPAALRERIRQGEFDGPTAGLANGYAQANLMIVRRELAYDFLLFCQRNPKP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHEECCCCCC CPLLDVTDPGSFEPRHAAPGADIRTDFPRYRIYRNGELDQEVQDITPFWEDDMVAFLIGC CCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCEEEEEEEC SFSFEAALLANGVPVRHIEDGHNVPMYRTNIACQPAGGLSGPMVVSMRPMPANKVVRAVQ CCCCCHHHHHCCCCEEEECCCCCCCEEEECEEECCCCCCCCCEEEEECCCCHHHHHHHHH VTSRFPSVHGAPVHVGDPRLLGIADLAKPDFGEPSELREGEVPVFWACGVTPQAVAMQAR HHHHCCCCCCCEEEECCCCEEEHHHHCCCCCCCHHHHCCCCCCEEEECCCCHHHHEEECC PELVITHAPGHMFITDLRDEQLGVI CCEEEEECCCCEEEEECCCCCCCCC >Mature Secondary Structure MNLTAYRDLSPAALRERIRQGEFDGPTAGLANGYAQANLMIVRRELAYDFLLFCQRNPKP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHEECCCCCC CPLLDVTDPGSFEPRHAAPGADIRTDFPRYRIYRNGELDQEVQDITPFWEDDMVAFLIGC CCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCEEEEEEEC SFSFEAALLANGVPVRHIEDGHNVPMYRTNIACQPAGGLSGPMVVSMRPMPANKVVRAVQ CCCCCHHHHHCCCCEEEECCCCCCCEEEECEEECCCCCCCCCEEEEECCCCHHHHHHHHH VTSRFPSVHGAPVHVGDPRLLGIADLAKPDFGEPSELREGEVPVFWACGVTPQAVAMQAR HHHHCCCCCCCEEEECCCCEEEHHHHCCCCCCCHHHHCCCCCCEEEECCCCHHHHEEECC PELVITHAPGHMFITDLRDEQLGVI CCEEEEECCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA