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The map label for this gene is yfmJ [H]

Identifier: 146282933

GI number: 146282933

Start: 2816177

End: 2817181

Strand: Direct

Name: yfmJ [H]

Synonym: PST_2594

Alternate gene names: 146282933

Gene position: 2816177-2817181 (Clockwise)

Preceding gene: 146282931

Following gene: 146282935

Centisome position: 61.66

GC content: 63.68

Gene sequence:

>1005_bases
ATGACCCTGCTCAACCAGCAATTCCTGCTCGCCCAGCGACCTGTCGGTGCACCGACCCGCGAGACCTTCGAGTTCGTCGA
GAAACCGCTGGGCGAGCCCGGACCGAATCAGATTCTGGTCAAGGTCGAGTATCTGTCCATCGATCCGGCCATGCGTGGCT
GGATGAACGACGCCAAGTCCTACATCCCGCCGGTCGGCATCGGCGAGGTGATGCGTGCACTGGGCGTGGGCAAGGTGATC
GCCTCGCAGCATCCCGATTACAAGGAAGGTGATTACGTCAACGGCGCCCTGGGCGTGCAGGCGTACTACCTTGGCGAGCC
GAAGGGTTTCTACAAGGTCGATCCGCAACAGGCACCACTGCCGCGCTATCTCTCGGCGTTGGGCATGACCGGCATGACCG
CCTACTTCGCACTGCTGTCGGTCGGCCAGCCAAAGGCCGGCGAGACCGTGGTGATTTCCGGGGCCGCCGGCGCGGTCGGC
AGCATTGCCGGGCAGATCGCGAAGATCAAGGGCTGCCGCGTGGTCGGCATCGCTGGCGGCGCGGACAAGTGCCGGTTCCT
CACCGAGAAGCTCGGCTTCGATGGCGCCATCGACTACAAGAACGAGGACCTGGCCGCGGCGCTCAAGCGTGAGTGCCCGA
AAGGCGTGGACGTGTACTTCGACAACGTCGGTGGCGACATCCTCGACACGGTGCTGCAGCGCCTGAGCGTCGGCGCGCGG
GTAGTGATCTGCGGCGCCATCAGCCAGTACAACAACAAGGAAGCGGTGAAGGGCCCGTCCAACTATCTGTCGCTGCTGGT
CAACCGCGCACGGATGGAGGGCATGGTGGTCACCGACTACGTTTCGCGCTACCCCGAAGCGATGCGCGACATGGCCGAGT
GGCTGGCCAGCGGCAAGCTCAAGAGCAAGGAGGACGTCATCGAGGGCCTGCAGACCTTCCCCGAAACACTGATGAAGCTG
TTCACCGGCGGCAACTTCGGCAAGCTGGTCCTTAAGGTCAGCTGA

Upstream 100 bases:

>100_bases
ACCGAAGTGGATGCCTGTGCATTCCAGCGCTCCGACGTCCCTTGCAGCTGCGCGCCGGGCGAGCTACACCAAACCTTTCG
CAACTACGAGGCAAACGTTC

Downstream 100 bases:

>100_bases
GCGTAACGAGGTGAAGTCACAGGCCGAGCCCAGTGGCTCGGCCTTCTCGTTCGCGCTTACGCCAGCTCGGCTACCACGCT
GGCCAGCGCGCTCGCCGGGT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTLLNQQFLLAQRPVGAPTRETFEFVEKPLGEPGPNQILVKVEYLSIDPAMRGWMNDAKSYIPPVGIGEVMRALGVGKVI
ASQHPDYKEGDYVNGALGVQAYYLGEPKGFYKVDPQQAPLPRYLSALGMTGMTAYFALLSVGQPKAGETVVISGAAGAVG
SIAGQIAKIKGCRVVGIAGGADKCRFLTEKLGFDGAIDYKNEDLAAALKRECPKGVDVYFDNVGGDILDTVLQRLSVGAR
VVICGAISQYNNKEAVKGPSNYLSLLVNRARMEGMVVTDYVSRYPEAMRDMAEWLASGKLKSKEDVIEGLQTFPETLMKL
FTGGNFGKLVLKVS

Sequences:

>Translated_334_residues
MTLLNQQFLLAQRPVGAPTRETFEFVEKPLGEPGPNQILVKVEYLSIDPAMRGWMNDAKSYIPPVGIGEVMRALGVGKVI
ASQHPDYKEGDYVNGALGVQAYYLGEPKGFYKVDPQQAPLPRYLSALGMTGMTAYFALLSVGQPKAGETVVISGAAGAVG
SIAGQIAKIKGCRVVGIAGGADKCRFLTEKLGFDGAIDYKNEDLAAALKRECPKGVDVYFDNVGGDILDTVLQRLSVGAR
VVICGAISQYNNKEAVKGPSNYLSLLVNRARMEGMVVTDYVSRYPEAMRDMAEWLASGKLKSKEDVIEGLQTFPETLMKL
FTGGNFGKLVLKVS
>Mature_333_residues
TLLNQQFLLAQRPVGAPTRETFEFVEKPLGEPGPNQILVKVEYLSIDPAMRGWMNDAKSYIPPVGIGEVMRALGVGKVIA
SQHPDYKEGDYVNGALGVQAYYLGEPKGFYKVDPQQAPLPRYLSALGMTGMTAYFALLSVGQPKAGETVVISGAAGAVGS
IAGQIAKIKGCRVVGIAGGADKCRFLTEKLGFDGAIDYKNEDLAAALKRECPKGVDVYFDNVGGDILDTVLQRLSVGARV
VICGAISQYNNKEAVKGPSNYLSLLVNRARMEGMVVTDYVSRYPEAMRDMAEWLASGKLKSKEDVIEGLQTFPETLMKLF
TGGNFGKLVLKVS

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=346, Percent_Identity=37.8612716763006, Blast_Score=222, Evalue=4e-58,
Organism=Homo sapiens, GI226246680, Length=346, Percent_Identity=37.8612716763006, Blast_Score=222, Evalue=4e-58,
Organism=Homo sapiens, GI22748929, Length=346, Percent_Identity=37.8612716763006, Blast_Score=222, Evalue=4e-58,
Organism=Homo sapiens, GI226059159, Length=333, Percent_Identity=35.7357357357357, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI226059133, Length=333, Percent_Identity=35.7357357357357, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI226056130, Length=306, Percent_Identity=35.2941176470588, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI28557745, Length=326, Percent_Identity=30.6748466257669, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI22538446, Length=237, Percent_Identity=29.535864978903, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI22538444, Length=237, Percent_Identity=29.535864978903, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI194239674, Length=222, Percent_Identity=27.027027027027, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI13236495, Length=222, Percent_Identity=27.027027027027, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI226510941, Length=335, Percent_Identity=44.1791044776119, Blast_Score=299, Evalue=1e-82,
Organism=Escherichia coli, GI1790485, Length=311, Percent_Identity=29.2604501607717, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI133901710, Length=358, Percent_Identity=33.5195530726257, Blast_Score=177, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI133901712, Length=358, Percent_Identity=33.5195530726257, Blast_Score=177, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17507255, Length=121, Percent_Identity=31.404958677686, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323504, Length=338, Percent_Identity=34.0236686390533, Blast_Score=150, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35987; Mature: 35856

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLNQQFLLAQRPVGAPTRETFEFVEKPLGEPGPNQILVKVEYLSIDPAMRGWMNDAKS
CCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHH
YIPPVGIGEVMRALGVGKVIASQHPDYKEGDYVNGALGVQAYYLGEPKGFYKVDPQQAPL
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCH
PRYLSALGMTGMTAYFALLSVGQPKAGETVVISGAAGAVGSIAGQIAKIKGCRVVGIAGG
HHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCC
ADKCRFLTEKLGFDGAIDYKNEDLAAALKRECPKGVDVYFDNVGGDILDTVLQRLSVGAR
CHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCE
VVICGAISQYNNKEAVKGPSNYLSLLVNRARMEGMVVTDYVSRYPEAMRDMAEWLASGKL
EEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
KSKEDVIEGLQTFPETLMKLFTGGNFGKLVLKVS
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
>Mature Secondary Structure 
TLLNQQFLLAQRPVGAPTRETFEFVEKPLGEPGPNQILVKVEYLSIDPAMRGWMNDAKS
CCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHH
YIPPVGIGEVMRALGVGKVIASQHPDYKEGDYVNGALGVQAYYLGEPKGFYKVDPQQAPL
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCH
PRYLSALGMTGMTAYFALLSVGQPKAGETVVISGAAGAVGSIAGQIAKIKGCRVVGIAGG
HHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCC
ADKCRFLTEKLGFDGAIDYKNEDLAAALKRECPKGVDVYFDNVGGDILDTVLQRLSVGAR
CHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCE
VVICGAISQYNNKEAVKGPSNYLSLLVNRARMEGMVVTDYVSRYPEAMRDMAEWLASGKL
EEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
KSKEDVIEGLQTFPETLMKLFTGGNFGKLVLKVS
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]