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The map label for this gene is ygdR [C]

Identifier: 146282719

GI number: 146282719

Start: 2597258

End: 2597512

Strand: Direct

Name: ygdR [C]

Synonym: PST_2377

Alternate gene names: 146282719

Gene position: 2597258-2597512 (Clockwise)

Preceding gene: 146282718

Following gene: 146282721

Centisome position: 56.86

GC content: 56.47

Gene sequence:

>255_bases
ATGGTTATCGTTACTCGCAGAAGGAACAGCGTCATGCAAACACGCACTCTACCCGCCCTCATTCTTGCGCTGAGCTTCGG
CATATTGGCCGGTTGCGCCAATCCGAGCGTTATCACCTTGAACGACGGTCGCGAGATCCAGACCTTGGACCGCCCGGATT
ACGACGACGAGTCGGGGTTCTATGAATACGAGCAACTCGACGGCAAGCCGGGCAAAGTGAACAAGGATCAGGTCCGCACC
GTACGCGAACTCTGA

Upstream 100 bases:

>100_bases
GTCAGGAAGGACGATCCTCGCCTGGCCAACCTCAACACGCCGGAGCTTCTCAAAGCCAGCCGTTCAGAGCTGGGAACTTC
ATCGTAGCGCGCTTCGTCCG

Downstream 100 bases:

>100_bases
TCAGTCTGAACGTCGTGCTGTCGATTCGGATCAGACAGCACGACAAGCTTCAGCACGCCTCACCGAGCCAGCACGGCGTG
TGAAAAAAATCCGGCGTAAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MVIVTRRRNSVMQTRTLPALILALSFGILAGCANPSVITLNDGREIQTLDRPDYDDESGFYEYEQLDGKPGKVNKDQVRT
VREL

Sequences:

>Translated_84_residues
MVIVTRRRNSVMQTRTLPALILALSFGILAGCANPSVITLNDGREIQTLDRPDYDDESGFYEYEQLDGKPGKVNKDQVRT
VREL
>Mature_84_residues
MVIVTRRRNSVMQTRTLPALILALSFGILAGCANPSVITLNDGREIQTLDRPDYDDESGFYEYEQLDGKPGKVNKDQVRT
VREL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9470; Mature: 9470

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIVTRRRNSVMQTRTLPALILALSFGILAGCANPSVITLNDGREIQTLDRPDYDDESGF
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCCC
YEYEQLDGKPGKVNKDQVRTVREL
EEHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MVIVTRRRNSVMQTRTLPALILALSFGILAGCANPSVITLNDGREIQTLDRPDYDDESGF
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCCC
YEYEQLDGKPGKVNKDQVRTVREL
EEHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA