Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

Click here to switch to the map view.

The map label for this gene is imuB [H]

Identifier: 146282690

GI number: 146282690

Start: 2563402

End: 2564814

Strand: Direct

Name: imuB [H]

Synonym: PST_2346

Alternate gene names: 146282690

Gene position: 2563402-2564814 (Clockwise)

Preceding gene: 146282689

Following gene: 146282691

Centisome position: 56.12

GC content: 67.8

Gene sequence:

>1413_bases
ATGCTCTGGGCCTGCATTCTACTGCCGCAACTGGCCATGGACGGCATCCTGCGCCACCGCGACGATGCCGCCGCACCACT
GGTTCTGCTCGCCGGCCCGCCACAGCGCCGCGTGCTGCAGGCTGTCAACACCGCCGCCCGCAAGCTCGGCCTCAAACCAG
GGCAATCGCTGGTCGCAGCCCAGGCATTGACCCACGACTTCGCCACTGCCGATTACGACCCGCTGATGATCGAACGCTGG
CAGCAGTTTCTGGCGGCCTGGGGTTACGGCTACAGCGCCCAGGTCAGCTTGCACTACCCGCGCTGTCTGCTGCTGGAGGT
GCATTCCAGCCTCGGCCTGTTCGGCCCCTGGCCACGATTCGAGAAGCGTCTGCGCGAGGAGCTCACAGACCTGGGCTTCC
GCCACCGCATCACCCTGGCACCCAACCCGGCGGCCGCGCGCGTCCTCGCCAATGCCCATGACGGGCTGGCCGTGACCGAT
ACGGCCACGCTGCATCAGGTGCTCGGGGTACTACCGATCGAGCGCCTCGGCCTGCCCCGCGAAGTCAGCACATCGCTGGT
ACGCATGGGCCTGCGCCATCTTCATCAACTGCTCGCCTTGCCGCGCGACAGCCTGGCCAGACGCTTTCCGGCCGAAGTGC
TGGCCCAGCTCGACACCCTGCTCGGGCATCGGCCGCTACCTCTGGAGTTCTACCGCCCACCGGATGTCTTCGACACCCGC
ATCGAACTGAATTTCGAGGTGGAGTCCCACCAGGCCCTGCTGTTTCCATTGCGCAGACTGACCGCCGACCTGGCCGCCTT
TCTCGCCGGGCGGGACAGCGGCGTCCAGCGTTTCAGTCTGTACCTGGAACATCGCACCCTGCCCGACAGCGAGGTGCCGG
TCGGCCTGCTCAGTACCGAACGCGAGCCCGCCATGCTGTTCGAACTGACTCGTGGCCGCCTCGAGCACCTGCAACTGCCG
GCCCCCGTCCTGGCCGTGCGTCTGCTGGCTCGTGATCTGCCAGCCTTCACGCCGGCCCATCAGGCCTTGTTCGACGAGCG
CCCGCAGCAGAATGTGCCCTGGGAGCAACTGCGCGAACGCCTCCGCGCCCGACTGGGCGACGATGCCGTAGTCTCGCTGA
GCGCACGAGCGGACCACCGCCCGGAATGCGCCTGGCGGGAAAGCAGCCTCGCCCACACCGACCCCTTGCCCCAAGCAGGT
TTGCGCCCCGGCTGGCTGCTGAACACCCCGCAACCCTTGCGCGAAGAGGGTCTGCTCACCCTGGCTGGCCCCGAGCGCAT
CGAGTCCGGCTGGTGGGATGGTGCCGACGCGCGGCGCGACTACTATCGGGTGCAAACCACTACCGGCCAACAGGGTTGGG
CGTTTCGCGCCCTTACCGGCGGGCCGCTGCTGCTGCACGGCTGGTTCGCATGA

Upstream 100 bases:

>100_bases
CCCTCGAGGCACAGCCGGTGCAACTACGGGTCATCAAGTGCCGCGGCGGCCTGGCTCCGGCCCGGCCGCTACCAGCCAGC
GCCTGGCAATAGGTGCGACG

Downstream 100 bases:

>100_bases
ACGCCGAATACGCCGAGCTGCACTGCCTGTCCAACTTCAGCTTCCAGCGGGGTGCATCCAGCGCGCGCGAACTCTTCGAG
CGCGCCAAGCGCCAGGGCTA

Product: DNA repair nucleotidyltransferase/DNA polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAAQALTHDFATADYDPLMIERW
QQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRFEKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTD
TATLHQVLGVLPIERLGLPREVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR
IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTEREPAMLFELTRGRLEHLQLP
APVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRERLRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAG
LRPGWLLNTPQPLREEGLLTLAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA

Sequences:

>Translated_470_residues
MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAAQALTHDFATADYDPLMIERW
QQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRFEKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTD
TATLHQVLGVLPIERLGLPREVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR
IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTEREPAMLFELTRGRLEHLQLP
APVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRERLRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAG
LRPGWLLNTPQPLREEGLLTLAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA
>Mature_470_residues
MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAAQALTHDFATADYDPLMIERW
QQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRFEKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTD
TATLHQVLGVLPIERLGLPREVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR
IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTEREPAMLFELTRGRLEHLQLP
APVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRERLRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAG
LRPGWLLNTPQPLREEGLLTLAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA

Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001126 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 52760; Mature: 52760

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAA
CEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHH
QALTHDFATADYDPLMIERWQQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHCCCCCCCHHH
EKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTDTATLHQVLGVLPIERLGLPR
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCCHHHCCCCH
EVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTE
EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEHHCCC
REPAMLFELTRGRLEHLQLPAPVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRER
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHH
LRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAGLRPGWLLNTPQPLREEGLLT
HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCEEE
LAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA
ECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCC
>Mature Secondary Structure
MLWACILLPQLAMDGILRHRDDAAAPLVLLAGPPQRRVLQAVNTAARKLGLKPGQSLVAA
CEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHH
QALTHDFATADYDPLMIERWQQFLAAWGYGYSAQVSLHYPRCLLLEVHSSLGLFGPWPRF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHCCCCCCCHHH
EKRLREELTDLGFRHRITLAPNPAAARVLANAHDGLAVTDTATLHQVLGVLPIERLGLPR
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCCHHHCCCCH
EVSTSLVRMGLRHLHQLLALPRDSLARRFPAEVLAQLDTLLGHRPLPLEFYRPPDVFDTR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
IELNFEVESHQALLFPLRRLTADLAAFLAGRDSGVQRFSLYLEHRTLPDSEVPVGLLSTE
EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEHHCCC
REPAMLFELTRGRLEHLQLPAPVLAVRLLARDLPAFTPAHQALFDERPQQNVPWEQLRER
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHH
LRARLGDDAVVSLSARADHRPECAWRESSLAHTDPLPQAGLRPGWLLNTPQPLREEGLLT
HHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCEEE
LAGPERIESGWWDGADARRDYYRVQTTTGQQGWAFRALTGGPLLLHGWFA
ECCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA