| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is fabI [H]
Identifier: 146282610
GI number: 146282610
Start: 2468553
End: 2469347
Strand: Direct
Name: fabI [H]
Synonym: PST_2262
Alternate gene names: 146282610
Gene position: 2468553-2469347 (Clockwise)
Preceding gene: 146282609
Following gene: 146282612
Centisome position: 54.05
GC content: 65.28
Gene sequence:
>795_bases ATGGGTTTTCTCACCGGTAAGCGCGTACTGATCGTCGGCGTTGCCAGCAAACTGTCGATTGCCTCGGGCATCGCCGCCGC CATGCATCGCGAAGGTGCTGAACTGGCTTTCACCTACCAGAACGACAAGCTCAAGGGCCGCGTCGAGGAATTCGCCGCCG GCTGGGGCTCGAGCCCGGAGCTGTGCTTCCCCTGCGACGTCGCCAATGACGAAGACATCGCCCGCGTGTTCGAGGAGCTG GGCAAGAAGTGGGACGGCCTGGACTGCATCGTTCACTCCGTCGGCTTCGCCCCGGGCGACCAGCTGAACGGCGACTTCAC CGAAGTCACCACCCGCGAAGGCTTCAAGATCGCCCACGACATCAGCGCCTACAGCTTCGTCGCCCTGGCCAAGGCCGGTC GCGAGATGATGAAGGGCCGCAACGGCAGCCTGCTCACGCTCTCCTACCTCGGCGCCGAGCGCACCATGCCGAACTACAAT GTGATGGGCATGGCCAAGGCCAGCCTGGAAGCCGGTGTACGCTACCTGGCTGGCAGCCTCGGCCCGGAAGGCACCCGCGT CAACTGCATCTCCGCCGGCCCGATCCGCACCTTGGCAGCCTCCGGCATCGCCAGCTTCCGCAAGATGCTCGCCGCCAACG AGAAGCAGACCCCGCTGCGCCGCAACGTCACCATCGAGGAAGTCGGCAACGCCGGTGCCTTCCTCTGCTCGGACCTGGCC TCGGGCATCAGCGGCGAGATCCTCTACGTGGATGGCGGCTTCAACACCACCGCCATGGGCTCGCTGGAAGACTGA
Upstream 100 bases:
>100_bases GAGATATTCGCGGCGCCGCAACATCCGTATACACAGCAGCTGCTGGAATCCGCCTTCATGGCGCCCGGCGCTGCCGAACA ACCAGAAGAGGGACAAGCAC
Downstream 100 bases:
>100_bases TCCTGCGCCCGCCTACGTAAAGCACCGAACCCCGCCTACTGGCGGGGTTCGTGTTTCTAGGGCGGCATCAGCCGGCCGTG ACCGTCATGCCGCCATCGGC
Product: enoyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MGFLTGKRVLIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLKGRVEEFAAGWGSSPELCFPCDVANDEDIARVFEEL GKKWDGLDCIVHSVGFAPGDQLNGDFTEVTTREGFKIAHDISAYSFVALAKAGREMMKGRNGSLLTLSYLGAERTMPNYN VMGMAKASLEAGVRYLAGSLGPEGTRVNCISAGPIRTLAASGIASFRKMLAANEKQTPLRRNVTIEEVGNAGAFLCSDLA SGISGEILYVDGGFNTTAMGSLED
Sequences:
>Translated_264_residues MGFLTGKRVLIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLKGRVEEFAAGWGSSPELCFPCDVANDEDIARVFEEL GKKWDGLDCIVHSVGFAPGDQLNGDFTEVTTREGFKIAHDISAYSFVALAKAGREMMKGRNGSLLTLSYLGAERTMPNYN VMGMAKASLEAGVRYLAGSLGPEGTRVNCISAGPIRTLAASGIASFRKMLAANEKQTPLRRNVTIEEVGNAGAFLCSDLA SGISGEILYVDGGFNTTAMGSLED >Mature_263_residues GFLTGKRVLIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLKGRVEEFAAGWGSSPELCFPCDVANDEDIARVFEELG KKWDGLDCIVHSVGFAPGDQLNGDFTEVTTREGFKIAHDISAYSFVALAKAGREMMKGRNGSLLTLSYLGAERTMPNYNV MGMAKASLEAGVRYLAGSLGPEGTRVNCISAGPIRTLAASGIASFRKMLAANEKQTPLRRNVTIEEVGNAGAFLCSDLAS GISGEILYVDGGFNTTAMGSLED
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503301, Length=233, Percent_Identity=28.755364806867, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI32483357, Length=197, Percent_Identity=30.9644670050761, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI7705925, Length=257, Percent_Identity=27.2373540856031, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI59889578, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787545, Length=263, Percent_Identity=70.722433460076, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI1787905, Length=257, Percent_Identity=28.7937743190661, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI2367365, Length=266, Percent_Identity=30.8270676691729, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI87082100, Length=262, Percent_Identity=28.2442748091603, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=28.0632411067194, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24644337, Length=200, Percent_Identity=31, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=27.8884462151394, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 27964; Mature: 27833
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLTGKRVLIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLKGRVEEFAAGWGSSPE CCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCC LCFPCDVANDEDIARVFEELGKKWDGLDCIVHSVGFAPGDQLNGDFTEVTTREGFKIAHD EEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHEEECCCCCEEEHH ISAYSFVALAKAGREMMKGRNGSLLTLSYLGAERTMPNYNVMGMAKASLEAGVRYLAGSL HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCC GPEGTRVNCISAGPIRTLAASGIASFRKMLAANEKQTPLRRNVTIEEVGNAGAFLCSDLA CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHHHH SGISGEILYVDGGFNTTAMGSLED CCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure GFLTGKRVLIVGVASKLSIASGIAAAMHREGAELAFTYQNDKLKGRVEEFAAGWGSSPE CCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCC LCFPCDVANDEDIARVFEELGKKWDGLDCIVHSVGFAPGDQLNGDFTEVTTREGFKIAHD EEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHEEECCCCCEEEHH ISAYSFVALAKAGREMMKGRNGSLLTLSYLGAERTMPNYNVMGMAKASLEAGVRYLAGSL HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCC GPEGTRVNCISAGPIRTLAASGIASFRKMLAANEKQTPLRRNVTIEEVGNAGAFLCSDLA CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHHHH SGISGEILYVDGGFNTTAMGSLED CCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10464225; 10984043 [H]