| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is glpE [H]
Identifier: 145301117
GI number: 145301117
Start: 4585059
End: 4585388
Strand: Direct
Name: glpE [H]
Synonym: ASA_4286
Alternate gene names: 145301117
Gene position: 4585059-4585388 (Clockwise)
Preceding gene: 145301115
Following gene: 145301118
Centisome position: 97.5
GC content: 60.91
Gene sequence:
>330_bases ATGCAAATGGACCAGTTTGCCCATATCAGTGCCCATGATGCCCACCAGAAGCTCGCTGCCGGTGAAGCCCGCCTCGTGGA TATTCGCGATCCCCAATCCTTCGAGACAGCCCATGCGGTCGGTGCCTTCCACCTCACCAACGGCACCCTGGTGCGCTTCA TGGACGAGGTGGACTTCGACACCCCTGTCATCGTGATCTGCTATCACGGCAACAGCAGCCAGAGCGCTGCCCAGTACCTG CTGCAGCAGGGGTATGACGAAGTCTACAGCCTGGATGGCGGCTTCGAGGCGTGGCGCCAGGAGTTTCCCATCGAGGCAGG CGACGCATGA
Upstream 100 bases:
>100_bases GAAAATTGCGATCTTCCCGGCGGGACGACCGGACACATTGCGGGCTTAGCACCAGCGCAGGCTTGCGGTAAACTGGCCTC CAGTTACCTATTCGCAGGAC
Downstream 100 bases:
>100_bases TCCAGCTGCTGGTGCTCGACAACGCCCGCATGGCGCAAGCCCTGGTGGACTATCTCGCCACCCTCGGCATCTCGTGCGAG CTGACCCAGTCAGAGCTCGG
Product: thiosulfate sulfurtransferase glpE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQMDQFAHISAHDAHQKLAAGEARLVDIRDPQSFETAHAVGAFHLTNGTLVRFMDEVDFDTPVIVICYHGNSSQSAAQYL LQQGYDEVYSLDGGFEAWRQEFPIEAGDA
Sequences:
>Translated_109_residues MQMDQFAHISAHDAHQKLAAGEARLVDIRDPQSFETAHAVGAFHLTNGTLVRFMDEVDFDTPVIVICYHGNSSQSAAQYL LQQGYDEVYSLDGGFEAWRQEFPIEAGDA >Mature_109_residues MQMDQFAHISAHDAHQKLAAGEARLVDIRDPQSFETAHAVGAFHLTNGTLVRFMDEVDFDTPVIVICYHGNSSQSAAQYL LQQGYDEVYSLDGGFEAWRQEFPIEAGDA
Specific function: Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide [H]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Escherichia coli, GI1789831, Length=103, Percent_Identity=71.8446601941748, Blast_Score=154, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 12117; Mature: 12117
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMDQFAHISAHDAHQKLAAGEARLVDIRDPQSFETAHAVGAFHLTNGTLVRFMDEVDFD CCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHEEEEECCCHHEEHHHHCCCC TPVIVICYHGNSSQSAAQYLLQQGYDEVYSLDGGFEAWRQEFPIEAGDA CCEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MQMDQFAHISAHDAHQKLAAGEARLVDIRDPQSFETAHAVGAFHLTNGTLVRFMDEVDFD CCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHEEEEECCCHHEEHHHHCCCC TPVIVICYHGNSSQSAAQYLLQQGYDEVYSLDGGFEAWRQEFPIEAGDA CCEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA