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The map label for this gene is tnp2 [C]

Identifier: 145301106

GI number: 145301106

Start: 4573148

End: 4574167

Strand: Direct

Name: tnp2 [C]

Synonym: ASA_4275

Alternate gene names: 145301106

Gene position: 4573148-4574167 (Clockwise)

Preceding gene: 145301104

Following gene: 145301107

Centisome position: 97.25

GC content: 60.1

Gene sequence:

>1020_bases
ATGAATGGCGAGAGGTGGCCAACTGCTGATTGGTGGTACCCTTCTGCTCGCCAAAGTAAAAGCAGTATCACCATGAGCTA
TCAGCAGTTGACCGAGGGGCAACGATACCAGTTATCGGTGCTTCGCGCACAGGGGATGTCCATCCTTGCCACCGCACGCG
CCATTGGCGTTCATCGCTCCACCCTCTACCGGGAGCTGCGTCGTAACGCCGGGCCGCAGGGCTACCAGCCAGACAATGCG
CATCAGCACGCCACCCACCGACGGGCCAGTGCGGCCAAATCTCGGCTATCTGCCGATGTCATCCAGTTTGTCGAGCTGAC
ACTCGCCTGGTGGTGGAGCCCGGAGCAGATAAGCGCGGTGGGCAAGCAGATAGGCCTCATGGTGAGTCACGAGTGGATAT
ACCGCCATGTGGCCGCCGACAAAGCCCGGGGTGGCCAGTTGTACCGCCATCTGCGCCAGGGCCACAAGCGCTACCGCAAG
GGGGCGAGCAGCCTGCGTTCTCCCATCAAGGAAGCCCGCTCTATTGATGAACGGCCGGCTATCGTCGATAGCCGGGAGCG
GCTCGGTGATTGGGAGGCGGACACGGTGCTGGGCAAGCAAGGCACAGGTGCACTGGTCACCCTGGTGGAGCGCAAGAGCC
GGCTCTATCTGGTCAAGCGGGTCGCGAGCAAACAGGCTGGGGTGGTGCGGGATGCGATAATCGAGATGTTAACGCCCTAC
ATCGAGCAGGTGCATACCATCACCTTTGACAACGGCGGCGAGTTTGCCGAACACAAGGCGATAGAGGAAGCGCTGGGTGC
CGAGACTTACTTTGCGCACCCTTACTCTTCGTGGGAGCGCGGTCTGAACGAGAACAGCAATGGGCTGTTGAGGCAGTTTA
TCCCAAAGGGAACAGACCTGAGAGAGGTCACGGACGAGGATGTCAGGAGAGCGGAGCAGTGGCTCAACCTACGACCTCGG
AAATGTCTCGGATTCAGGCAGCCTGTCAAGGTATTCGAAGAGTACCGTCAGGCGGCATAG

Upstream 100 bases:

>100_bases
TAGATCTCTTTGTCTAAATAAGAGCATGCGCCGGATCACATAACCACCACATATTTCATGAGGGCTTCGGGAATTCAGAT
AATAAGTGCGACACTCATGG

Downstream 100 bases:

>100_bases
GCGAGTGTCGCACTTCGAAGTTGAATTCGCGCTTTACCCATTGTTGTTAGGTTCAATTCAGCAACACAGACAACACCCTA
TCAAAAACTCTTTTAATAAA

Product: transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNGERWPTADWWYPSARQSKSSITMSYQQLTEGQRYQLSVLRAQGMSILATARAIGVHRSTLYRELRRNAGPQGYQPDNA
HQHATHRRASAAKSRLSADVIQFVELTLAWWWSPEQISAVGKQIGLMVSHEWIYRHVAADKARGGQLYRHLRQGHKRYRK
GASSLRSPIKEARSIDERPAIVDSRERLGDWEADTVLGKQGTGALVTLVERKSRLYLVKRVASKQAGVVRDAIIEMLTPY
IEQVHTITFDNGGEFAEHKAIEEALGAETYFAHPYSSWERGLNENSNGLLRQFIPKGTDLREVTDEDVRRAEQWLNLRPR
KCLGFRQPVKVFEEYRQAA

Sequences:

>Translated_339_residues
MNGERWPTADWWYPSARQSKSSITMSYQQLTEGQRYQLSVLRAQGMSILATARAIGVHRSTLYRELRRNAGPQGYQPDNA
HQHATHRRASAAKSRLSADVIQFVELTLAWWWSPEQISAVGKQIGLMVSHEWIYRHVAADKARGGQLYRHLRQGHKRYRK
GASSLRSPIKEARSIDERPAIVDSRERLGDWEADTVLGKQGTGALVTLVERKSRLYLVKRVASKQAGVVRDAIIEMLTPY
IEQVHTITFDNGGEFAEHKAIEEALGAETYFAHPYSSWERGLNENSNGLLRQFIPKGTDLREVTDEDVRRAEQWLNLRPR
KCLGFRQPVKVFEEYRQAA
>Mature_339_residues
MNGERWPTADWWYPSARQSKSSITMSYQQLTEGQRYQLSVLRAQGMSILATARAIGVHRSTLYRELRRNAGPQGYQPDNA
HQHATHRRASAAKSRLSADVIQFVELTLAWWWSPEQISAVGKQIGLMVSHEWIYRHVAADKARGGQLYRHLRQGHKRYRK
GASSLRSPIKEARSIDERPAIVDSRERLGDWEADTVLGKQGTGALVTLVERKSRLYLVKRVASKQAGVVRDAIIEMLTPY
IEQVHTITFDNGGEFAEHKAIEEALGAETYFAHPYSSWERGLNENSNGLLRQFIPKGTDLREVTDEDVRRAEQWLNLRPR
KCLGFRQPVKVFEEYRQAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=325, Percent_Identity=32.9230769230769, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1790736, Length=325, Percent_Identity=32.9230769230769, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787671, Length=325, Percent_Identity=32.9230769230769, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 38793; Mature: 38793

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGERWPTADWWYPSARQSKSSITMSYQQLTEGQRYQLSVLRAQGMSILATARAIGVHRS
CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
TLYRELRRNAGPQGYQPDNAHQHATHRRASAAKSRLSADVIQFVELTLAWWWSPEQISAV
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GKQIGLMVSHEWIYRHVAADKARGGQLYRHLRQGHKRYRKGASSLRSPIKEARSIDERPA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IVDSRERLGDWEADTVLGKQGTGALVTLVERKSRLYLVKRVASKQAGVVRDAIIEMLTPY
CCCCHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQVHTITFDNGGEFAEHKAIEEALGAETYFAHPYSSWERGLNENSNGLLRQFIPKGTDL
HHHHHEEEECCCCCHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCCCHHHHHHCCCCCCH
REVTDEDVRRAEQWLNLRPRKCLGFRQPVKVFEEYRQAA
HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNGERWPTADWWYPSARQSKSSITMSYQQLTEGQRYQLSVLRAQGMSILATARAIGVHRS
CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
TLYRELRRNAGPQGYQPDNAHQHATHRRASAAKSRLSADVIQFVELTLAWWWSPEQISAV
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GKQIGLMVSHEWIYRHVAADKARGGQLYRHLRQGHKRYRKGASSLRSPIKEARSIDERPA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IVDSRERLGDWEADTVLGKQGTGALVTLVERKSRLYLVKRVASKQAGVVRDAIIEMLTPY
CCCCHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEQVHTITFDNGGEFAEHKAIEEALGAETYFAHPYSSWERGLNENSNGLLRQFIPKGTDL
HHHHHEEEECCCCCHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCCCHHHHHHCCCCCCH
REVTDEDVRRAEQWLNLRPRKCLGFRQPVKVFEEYRQAA
HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]