| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yfiQ [H]
Identifier: 145301075
GI number: 145301075
Start: 4531107
End: 4533677
Strand: Direct
Name: yfiQ [H]
Synonym: ASA_4240
Alternate gene names: 145301075
Gene position: 4531107-4533677 (Clockwise)
Preceding gene: 145301074
Following gene: 145301080
Centisome position: 96.36
GC content: 59.98
Gene sequence:
>2571_bases ATGAAACCAAGCGGCCTGGATCGGCTCTTCAAACCCCACTCAATCGCCGTCATCGGTGCCTCGACCGACCCACAGAAAGC TGGTCACGTGGTGATCAGGCACCTGCTTGCAGGCCAGTTCAAGGGCCCCATACTGCCGGTCAGCCCCCATAACAAAGCCA TCGCCGGAGTGCTGGCTTATCCCGACATTGCCAGCCTGCCACTCTCCCCCGATCTCGCCATCATCTGCACCAAACGCGAA CGGGTACTGTCGCTCATCGAAGCTCTCGGCAAAAAAGGGGCCGGGGCCGCCATCATACTGGCCGCCGATTTTTCGCAGGA AGAGAGGGAACAGTTGCAGCGCCTGAGCAGCCAATATGACATTCGCCTGCTTGGCCCCAACAGCATGGGCATGTTACTGC CAGCGCAGGGCATCAACGCCAGCTTCTCCCCTATCGCAGCCAAACCTGGGCAGGTAGCCTTTGTCTCCCAGTCGGCGGCC GTCAGCACGACCATACTGGATTGGGCCAAACAGCATGAGCTGGGCTTTTCCGCCTTTATCTCCCTCGGCGATCACTGTGA CATCGACTTCGGCCAACTGCTCGATCAGCTCTCTCGCGACGGCACCACTCGCGCCATCCTGCTCTATATGGACAAGTTGC ACGACGCCCGCCACTTCCTCTCGGCAGCGCGGGCGGCTTCGCGCAACAAGCCAATACTGGTGCTCAAGAGCGGTCGCCAC GATCCGGCCAAGGGGCTGGACAACGTCTACGATGCCGCCATCCGGCGAGCAGGCATGCTGCGGGTACGAGATACCCACGA GCTGTTTGCCGCGGTCGAAACCCTGAGCCATTCGCTGACCCTCAAGGGGGAACGGCTGGCCATCATCTCCAACGGCCGCG GACTGGCCAACATGGCGGTCGATGTGCTGCTTGAGCGGGGCGGAAAACTGGCTATACCGCCAAAAGACATAGGTAGTGAT GCAGATATCACCGCCTATCAGCAGGCACTCGATGCCTTGCTGCAAGGGAATGAAGCAGATGCCATCCTGCTCATTCATGC ACCTTCCCTCACAGCACGCGGGGCCGAATTGGCGCGCAGTCTGATCGATTACCTCAGGCAGCATCCCAGAGCCAGGCGCT TCAATATCCTGACCAACTGGGCCGGGGAATACTCGGCACAGGAAGGACGCAAGCTCTTCACCGAGGCGGGCATTCCGACC TATCGCACTCCCGAAAGTGCAGTGGCCGCCTTCATGCATATGGTGGAATACCGTCGCAACCAGAAGCAACTGATGGAAAC ACCCGCGTCCCTGCAGGGGGACAAGCTCAACGTCGAACTCTGCCAACAACTGATCCGGCAGGCTCTGGAACGCAAGCAAC TCACCCTCGATACCCATCTGGTGCAACCCATACTGCAAGCTGCCGGGCTCGCGACCCTGCCGACTTGGATTGTCTCCGAC GCCATCGAAGCCACCCTGACGGCTGAACAGATCGGCTATCCGGTAGCGGTCAAATTGCGCTCGCCGGATATTGCCCACAA GTCTGCGGTGCACGGCGTCATGCTGAACCTGCGTACTTCTGCCGAGGTCGCTCAGGCGGCAGATGCCATTCTGGATCGGG TCAGACAGCACGATGCGGGGGCCCGCATCGAAGGCTTGCTGGTACAGCGCATGGCACGCCGCAGCGGAGGGCTGGAACTG AGGATCCGCCTGCAACAGGATCCCGTCTTCGGTCCTGTCATCCTGCTCGGCGAGTCGGGAGCAGAACCCCAGGAGATGGT CGCCGCACTCCCGCCACTGAACCAGGCTCTCGCACGCTACCAGGTCATCGGCGCCCTCAAGAGCCGCAAGATCCGCGAGC AGGCCACCCCCGAAAGACTCGATATCGATGCGCTTGGTCAAGTGTTGTGCCAGCTGTCGGAACTGCTGCTGGCGTTTCCC GAGATCCAGGAGCTGGACCTGCATCCATTGCAAGCATGCGGGGCCGAGATGGTGATTCTAGATGCCAGCCTGACACTGAT GCCGATGACACAGCAGCGTTGCCCCTTGGCGATACGCCCCTATCCCACCGAGCTGGAAGAGGGGGCCTGGCTCAAGGACC AGAGCCATGTGCTGCTCCGCCCGATCCGGCCGGAGGATGAACCCGCTCACAAACAGTTTGTACTCAAGGTCTCCGATGAA GACAGGTACAAACGCTTCTTTGCTGACGTGGGAGAACTGGGCCACGAAGAGCTCGCTCGCATGACCCAGATTGACTACGA CAGGGAGATGGCCTTCGTCGCGGTAGGACAGGACGGAGCCTTCAGTCAGCAAATTCTGGGGGTGGTGCGAGCCATTTCAA ACCCGGATCAGTCCGATGCGGAGTTTGCCATTCTGGTGCGATCCGACCTAAAGGGGCTGGGGCTCGGCAAGTTGATGATG GAGAAAATCGTACGTTACGCCAGAGAGAGAGGGATTGGCCAGCTATCCGGCATGACCATGCCCAGCAATCGCGGCATGAT CAATCTGGCCAAGCGTCTTGGTTTCAAGATCGATATCCAGCTGGAAGATGGGGTGGTCAATATGGAGTTGCCCTGTGCGG AGAGAGCCTAA
Upstream 100 bases:
>100_bases AAACAGTGATCCGCAACCGGTCACAGAACAGGCAATCAAAGCGTATTACACTGGCACCATCCATCACCCTCGCCTCCGGG GGTCGCCATGAGGAGTGCCC
Downstream 100 bases:
>100_bases GGGGCATAGCGCAGAGGACACCGCAGGAATGATAAATTTCAGGCAATAAAAAACCCCGCTCATCGAGCGGGGGTTTTCGT GTTGGGTGCCTGGCAGTGTC
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MKPSGLDRLFKPHSIAVIGASTDPQKAGHVVIRHLLAGQFKGPILPVSPHNKAIAGVLAYPDIASLPLSPDLAIICTKRE RVLSLIEALGKKGAGAAIILAADFSQEEREQLQRLSSQYDIRLLGPNSMGMLLPAQGINASFSPIAAKPGQVAFVSQSAA VSTTILDWAKQHELGFSAFISLGDHCDIDFGQLLDQLSRDGTTRAILLYMDKLHDARHFLSAARAASRNKPILVLKSGRH DPAKGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSLTLKGERLAIISNGRGLANMAVDVLLERGGKLAIPPKDIGSD ADITAYQQALDALLQGNEADAILLIHAPSLTARGAELARSLIDYLRQHPRARRFNILTNWAGEYSAQEGRKLFTEAGIPT YRTPESAVAAFMHMVEYRRNQKQLMETPASLQGDKLNVELCQQLIRQALERKQLTLDTHLVQPILQAAGLATLPTWIVSD AIEATLTAEQIGYPVAVKLRSPDIAHKSAVHGVMLNLRTSAEVAQAADAILDRVRQHDAGARIEGLLVQRMARRSGGLEL RIRLQQDPVFGPVILLGESGAEPQEMVAALPPLNQALARYQVIGALKSRKIREQATPERLDIDALGQVLCQLSELLLAFP EIQELDLHPLQACGAEMVILDASLTLMPMTQQRCPLAIRPYPTELEEGAWLKDQSHVLLRPIRPEDEPAHKQFVLKVSDE DRYKRFFADVGELGHEELARMTQIDYDREMAFVAVGQDGAFSQQILGVVRAISNPDQSDAEFAILVRSDLKGLGLGKLMM EKIVRYARERGIGQLSGMTMPSNRGMINLAKRLGFKIDIQLEDGVVNMELPCAERA
Sequences:
>Translated_856_residues MKPSGLDRLFKPHSIAVIGASTDPQKAGHVVIRHLLAGQFKGPILPVSPHNKAIAGVLAYPDIASLPLSPDLAIICTKRE RVLSLIEALGKKGAGAAIILAADFSQEEREQLQRLSSQYDIRLLGPNSMGMLLPAQGINASFSPIAAKPGQVAFVSQSAA VSTTILDWAKQHELGFSAFISLGDHCDIDFGQLLDQLSRDGTTRAILLYMDKLHDARHFLSAARAASRNKPILVLKSGRH DPAKGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSLTLKGERLAIISNGRGLANMAVDVLLERGGKLAIPPKDIGSD ADITAYQQALDALLQGNEADAILLIHAPSLTARGAELARSLIDYLRQHPRARRFNILTNWAGEYSAQEGRKLFTEAGIPT YRTPESAVAAFMHMVEYRRNQKQLMETPASLQGDKLNVELCQQLIRQALERKQLTLDTHLVQPILQAAGLATLPTWIVSD AIEATLTAEQIGYPVAVKLRSPDIAHKSAVHGVMLNLRTSAEVAQAADAILDRVRQHDAGARIEGLLVQRMARRSGGLEL RIRLQQDPVFGPVILLGESGAEPQEMVAALPPLNQALARYQVIGALKSRKIREQATPERLDIDALGQVLCQLSELLLAFP EIQELDLHPLQACGAEMVILDASLTLMPMTQQRCPLAIRPYPTELEEGAWLKDQSHVLLRPIRPEDEPAHKQFVLKVSDE DRYKRFFADVGELGHEELARMTQIDYDREMAFVAVGQDGAFSQQILGVVRAISNPDQSDAEFAILVRSDLKGLGLGKLMM EKIVRYARERGIGQLSGMTMPSNRGMINLAKRLGFKIDIQLEDGVVNMELPCAERA >Mature_856_residues MKPSGLDRLFKPHSIAVIGASTDPQKAGHVVIRHLLAGQFKGPILPVSPHNKAIAGVLAYPDIASLPLSPDLAIICTKRE RVLSLIEALGKKGAGAAIILAADFSQEEREQLQRLSSQYDIRLLGPNSMGMLLPAQGINASFSPIAAKPGQVAFVSQSAA VSTTILDWAKQHELGFSAFISLGDHCDIDFGQLLDQLSRDGTTRAILLYMDKLHDARHFLSAARAASRNKPILVLKSGRH DPAKGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSLTLKGERLAIISNGRGLANMAVDVLLERGGKLAIPPKDIGSD ADITAYQQALDALLQGNEADAILLIHAPSLTARGAELARSLIDYLRQHPRARRFNILTNWAGEYSAQEGRKLFTEAGIPT YRTPESAVAAFMHMVEYRRNQKQLMETPASLQGDKLNVELCQQLIRQALERKQLTLDTHLVQPILQAAGLATLPTWIVSD AIEATLTAEQIGYPVAVKLRSPDIAHKSAVHGVMLNLRTSAEVAQAADAILDRVRQHDAGARIEGLLVQRMARRSGGLEL RIRLQQDPVFGPVILLGESGAEPQEMVAALPPLNQALARYQVIGALKSRKIREQATPERLDIDALGQVLCQLSELLLAFP EIQELDLHPLQACGAEMVILDASLTLMPMTQQRCPLAIRPYPTELEEGAWLKDQSHVLLRPIRPEDEPAHKQFVLKVSDE DRYKRFFADVGELGHEELARMTQIDYDREMAFVAVGQDGAFSQQILGVVRAISNPDQSDAEFAILVRSDLKGLGLGKLMM EKIVRYARERGIGQLSGMTMPSNRGMINLAKRLGFKIDIQLEDGVVNMELPCAERA
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=886, Percent_Identity=55.3047404063205, Blast_Score=946, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 93761; Mature: 93761
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSGLDRLFKPHSIAVIGASTDPQKAGHVVIRHLLAGQFKGPILPVSPHNKAIAGVLAY CCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEC PDIASLPLSPDLAIICTKRERVLSLIEALGKKGAGAAIILAADFSQEEREQLQRLSSQYD CCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCC IRLLGPNSMGMLLPAQGINASFSPIAAKPGQVAFVSQSAAVSTTILDWAKQHELGFSAFI EEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHH SLGDHCDIDFGQLLDQLSRDGTTRAILLYMDKLHDARHFLSAARAASRNKPILVLKSGRH HCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC DPAKGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSLTLKGERLAIISNGRGLANMAV CCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCEEECCCEEEEEECCCCHHHHHH DVLLERGGKLAIPPKDIGSDADITAYQQALDALLQGNEADAILLIHAPSLTARGAELARS HHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHH LIDYLRQHPRARRFNILTNWAGEYSAQEGRKLFTEAGIPTYRTPESAVAAFMHMVEYRRN HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QKQLMETPASLQGDKLNVELCQQLIRQALERKQLTLDTHLVQPILQAAGLATLPTWIVSD HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIEATLTAEQIGYPVAVKLRSPDIAHKSAVHGVMLNLRTSAEVAQAADAILDRVRQHDAG HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCC ARIEGLLVQRMARRSGGLELRIRLQQDPVFGPVILLGESGAEPQEMVAALPPLNQALARY CHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHH QVIGALKSRKIREQATPERLDIDALGQVLCQLSELLLAFPEIQELDLHPLQACGAEMVIL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCCEEEEE DASLTLMPMTQQRCPLAIRPYPTELEEGAWLKDQSHVLLRPIRPEDEPAHKQFVLKVSDE ECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCC DRYKRFFADVGELGHEELARMTQIDYDREMAFVAVGQDGAFSQQILGVVRAISNPDQSDA HHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC EFAILVRSDLKGLGLGKLMMEKIVRYARERGIGQLSGMTMPSNRGMINLAKRLGFKIDIQ CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHCCCEEEEE LEDGVVNMELPCAERA EECCEEEEECCCCCCC >Mature Secondary Structure MKPSGLDRLFKPHSIAVIGASTDPQKAGHVVIRHLLAGQFKGPILPVSPHNKAIAGVLAY CCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEC PDIASLPLSPDLAIICTKRERVLSLIEALGKKGAGAAIILAADFSQEEREQLQRLSSQYD CCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCC IRLLGPNSMGMLLPAQGINASFSPIAAKPGQVAFVSQSAAVSTTILDWAKQHELGFSAFI EEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHH SLGDHCDIDFGQLLDQLSRDGTTRAILLYMDKLHDARHFLSAARAASRNKPILVLKSGRH HCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC DPAKGLDNVYDAAIRRAGMLRVRDTHELFAAVETLSHSLTLKGERLAIISNGRGLANMAV CCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCEEECCCEEEEEECCCCHHHHHH DVLLERGGKLAIPPKDIGSDADITAYQQALDALLQGNEADAILLIHAPSLTARGAELARS HHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHH LIDYLRQHPRARRFNILTNWAGEYSAQEGRKLFTEAGIPTYRTPESAVAAFMHMVEYRRN HHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QKQLMETPASLQGDKLNVELCQQLIRQALERKQLTLDTHLVQPILQAAGLATLPTWIVSD HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIEATLTAEQIGYPVAVKLRSPDIAHKSAVHGVMLNLRTSAEVAQAADAILDRVRQHDAG HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCCCC ARIEGLLVQRMARRSGGLELRIRLQQDPVFGPVILLGESGAEPQEMVAALPPLNQALARY CHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHH QVIGALKSRKIREQATPERLDIDALGQVLCQLSELLLAFPEIQELDLHPLQACGAEMVIL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCCEEEEE DASLTLMPMTQQRCPLAIRPYPTELEEGAWLKDQSHVLLRPIRPEDEPAHKQFVLKVSDE ECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCC DRYKRFFADVGELGHEELARMTQIDYDREMAFVAVGQDGAFSQQILGVVRAISNPDQSDA HHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCC EFAILVRSDLKGLGLGKLMMEKIVRYARERGIGQLSGMTMPSNRGMINLAKRLGFKIDIQ CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHCCCEEEEE LEDGVVNMELPCAERA EECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]