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The map label for this gene is 145300964

Identifier: 145300964

GI number: 145300964

Start: 4407856

End: 4408521

Strand: Direct

Name: 145300964

Synonym: ASA_4116

Alternate gene names: NA

Gene position: 4407856-4408521 (Clockwise)

Preceding gene: 145300962

Following gene: 145300967

Centisome position: 93.74

GC content: 62.46

Gene sequence:

>666_bases
ATGGACTTCAATCTGCAAGCGTACCAAGCCGACCACTTATTGCACCTGAGCGCAAAACCGGAACGACGCCTCTTTATCTT
GGAAAATGCCCATCACCGCTGGCTGGAGATCGACGGTGTAGTGCAATCGGCCATGTCCCTTGCCGAACCTGCCGCCCTCT
GCCTGCCCCATCAGCAGTGCATCGCAGACCTGCTGCCCGCCACCGCAAGCCGGGTGCTGGAACTGGGATTGGGCGGTGGC
GATCTCACTCGTCATCTGGGGGCGCGCTGGCCAGAGGCTCGGCACGACTGCGTCGATCTGGATGAAGAGGTACTGACCCT
GTTTCAGACCTTCTTCCGCCACCCGGCGGAGCCCGTTGACCGGGCGTTGCACCTGCACCACGCCGATGCCCTCGCCTTCC
TGCTGGCCCACGACGACACCTATGACTTCGTGCTGCTCGACCTGTTCAGTCAGGATGGCAATCCCCTGCTGCTGTTTCAG
GCTCCGCTCTATCAGGCACTGGCCAAATGCCTCCGCGGTACCCTCATCGTCAACCTGCTGCCACGGACACATCTCGAACT
GGCGCAGGCCAGGCGGCTGGCGGAGGAGTGGATTGGCCTCACCAGCACCCACGGGGTGCCCGGCTATCGCAACGTCATAC
TGCACGCCACCAACCTGACCCCCTAA

Upstream 100 bases:

>100_bases
AATAGGCATCCAGTTCGGCTGCCGTCTGGGGAGTGACCACCCGGTACATAGTTCTATCCTTGAGTTACACTGGTCGGAAA
CCATCTTGCCGTGCAAATTC

Downstream 100 bases:

>100_bases
CGCCACGGCTGGCCCTGTCTGCACGTTGCAGATAAAGGCCTTTAGCCAGGGGCGGGCTCGCGGCCATAACGCCTACACCT
GCAGCCAAAAGGTGACGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDFNLQAYQADHLLHLSAKPERRLFILENAHHRWLEIDGVVQSAMSLAEPAALCLPHQQCIADLLPATASRVLELGLGGG
DLTRHLGARWPEARHDCVDLDEEVLTLFQTFFRHPAEPVDRALHLHHADALAFLLAHDDTYDFVLLDLFSQDGNPLLLFQ
APLYQALAKCLRGTLIVNLLPRTHLELAQARRLAEEWIGLTSTHGVPGYRNVILHATNLTP

Sequences:

>Translated_221_residues
MDFNLQAYQADHLLHLSAKPERRLFILENAHHRWLEIDGVVQSAMSLAEPAALCLPHQQCIADLLPATASRVLELGLGGG
DLTRHLGARWPEARHDCVDLDEEVLTLFQTFFRHPAEPVDRALHLHHADALAFLLAHDDTYDFVLLDLFSQDGNPLLLFQ
APLYQALAKCLRGTLIVNLLPRTHLELAQARRLAEEWIGLTSTHGVPGYRNVILHATNLTP
>Mature_221_residues
MDFNLQAYQADHLLHLSAKPERRLFILENAHHRWLEIDGVVQSAMSLAEPAALCLPHQQCIADLLPATASRVLELGLGGG
DLTRHLGARWPEARHDCVDLDEEVLTLFQTFFRHPAEPVDRALHLHHADALAFLLAHDDTYDFVLLDLFSQDGNPLLLFQ
APLYQALAKCLRGTLIVNLLPRTHLELAQARRLAEEWIGLTSTHGVPGYRNVILHATNLTP

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24783; Mature: 24783

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNLQAYQADHLLHLSAKPERRLFILENAHHRWLEIDGVVQSAMSLAEPAALCLPHQQC
CCCCCCEECCCCEEEECCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCHHHHCCHHHH
IADLLPATASRVLELGLGGGDLTRHLGARWPEARHDCVDLDEEVLTLFQTFFRHPAEPVD
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHH
RALHLHHADALAFLLAHDDTYDFVLLDLFSQDGNPLLLFQAPLYQALAKCLRGTLIVNLL
HHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHC
PRTHLELAQARRLAEEWIGLTSTHGVPGYRNVILHATNLTP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCCC
>Mature Secondary Structure
MDFNLQAYQADHLLHLSAKPERRLFILENAHHRWLEIDGVVQSAMSLAEPAALCLPHQQC
CCCCCCEECCCCEEEECCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCHHHHCCHHHH
IADLLPATASRVLELGLGGGDLTRHLGARWPEARHDCVDLDEEVLTLFQTFFRHPAEPVD
HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCHHH
RALHLHHADALAFLLAHDDTYDFVLLDLFSQDGNPLLLFQAPLYQALAKCLRGTLIVNLL
HHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHC
PRTHLELAQARRLAEEWIGLTSTHGVPGYRNVILHATNLTP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA