| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300757
Identifier: 145300757
GI number: 145300757
Start: 4182190
End: 4182822
Strand: Direct
Name: 145300757
Synonym: ASA_3896
Alternate gene names: NA
Gene position: 4182190-4182822 (Clockwise)
Preceding gene: 145300756
Following gene: 145300759
Centisome position: 88.94
GC content: 36.33
Gene sequence:
>633_bases ATGCTCACTTCAATAAAAAAACTTGGTCTAACTAGTTCTCTTGAACGTGTATTCTACAATAGAGAAAGACATGAGATACT ACCACGTGATACATCACCAAAAAGAAACCTATTAACCAAGAGTGACGACTGGATTTATGAAAAAGAGCATCGAATAATAA CTAAGGTATCGAATGCAGATTACTTTATTATTACTAAAGATGCCTATGAATACATTCTTGATTTCTATGATGAAAGCTAC CTTGAACTGCTTGATATCGAGAAATACAAAGGGATGATGAAAATCTCCATAAATCATAAAGCATGTCATTTAATGGATCA GCAAGAAAAGGATGGCAACTCCACTGACGATATGGAGGAAATGAGATTTTCTCCAAGTAGCACCATATTGAACGAACCAC TCTCCTTTTTCGCAGCGGTACCAACTTCTATTTTCCTTTTTGATATACCAGTAGAGTGTATCGCTGGGATATTTTTAGGC TGTAGGTTAACAGACTCAGACAAGTCAACGCTACGTAAATTCGCTTGCAAGAATACGTTCCTTAATAAAATACCTTGCTA CCAAGCTAGTTTAAGCAAGCATCAATTCACCTTAGTTTTTGAAGAAACTGACCTTTTATGTACGGTGGCGTAG
Upstream 100 bases:
>100_bases ATCATATCCTTTACTGAAAGTTATAATAAACTATTAATGTGGTCCCACTATGCCGATGAGCACAAGGGTATTGTTGTTGA GTTTGACCACCACATTTTGA
Downstream 100 bases:
>100_bases GCGCAATGAACGAAGCGAATTGCATCTCTATTTTTACAACTTTACTTACCAAGCTCACTTTCATGCTAACAATAAATAAG TATTAAATTACAGAGTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLTSIKKLGLTSSLERVFYNRERHEILPRDTSPKRNLLTKSDDWIYEKEHRIITKVSNADYFIITKDAYEYILDFYDESY LELLDIEKYKGMMKISINHKACHLMDQQEKDGNSTDDMEEMRFSPSSTILNEPLSFFAAVPTSIFLFDIPVECIAGIFLG CRLTDSDKSTLRKFACKNTFLNKIPCYQASLSKHQFTLVFEETDLLCTVA
Sequences:
>Translated_210_residues MLTSIKKLGLTSSLERVFYNRERHEILPRDTSPKRNLLTKSDDWIYEKEHRIITKVSNADYFIITKDAYEYILDFYDESY LELLDIEKYKGMMKISINHKACHLMDQQEKDGNSTDDMEEMRFSPSSTILNEPLSFFAAVPTSIFLFDIPVECIAGIFLG CRLTDSDKSTLRKFACKNTFLNKIPCYQASLSKHQFTLVFEETDLLCTVA >Mature_210_residues MLTSIKKLGLTSSLERVFYNRERHEILPRDTSPKRNLLTKSDDWIYEKEHRIITKVSNADYFIITKDAYEYILDFYDESY LELLDIEKYKGMMKISINHKACHLMDQQEKDGNSTDDMEEMRFSPSSTILNEPLSFFAAVPTSIFLFDIPVECIAGIFLG CRLTDSDKSTLRKFACKNTFLNKIPCYQASLSKHQFTLVFEETDLLCTVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24405; Mature: 24405
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSIKKLGLTSSLERVFYNRERHEILPRDTSPKRNLLTKSDDWIYEKEHRIITKVSNAD CCCCCHHHCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCC YFIITKDAYEYILDFYDESYLELLDIEKYKGMMKISINHKACHLMDQQEKDGNSTDDMEE EEEEEHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCCCCCCCCCCHHH MRFSPSSTILNEPLSFFAAVPTSIFLFDIPVECIAGIFLGCRLTDSDKSTLRKFACKNTF HHCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCEECCCCHHHHHHHHHHHHH LNKIPCYQASLSKHQFTLVFEETDLLCTVA HHCCCCHHHCCCCCEEEEEEECCCEEEEEC >Mature Secondary Structure MLTSIKKLGLTSSLERVFYNRERHEILPRDTSPKRNLLTKSDDWIYEKEHRIITKVSNAD CCCCCHHHCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCC YFIITKDAYEYILDFYDESYLELLDIEKYKGMMKISINHKACHLMDQQEKDGNSTDDMEE EEEEEHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCCCCCCCCCCHHH MRFSPSSTILNEPLSFFAAVPTSIFLFDIPVECIAGIFLGCRLTDSDKSTLRKFACKNTF HHCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCEECCCCHHHHHHHHHHHHH LNKIPCYQASLSKHQFTLVFEETDLLCTVA HHCCCCHHHCCCCCEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA