| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is metA [H]
Identifier: 145300563
GI number: 145300563
Start: 3982642
End: 3983586
Strand: Direct
Name: metA [H]
Synonym: ASA_3695
Alternate gene names: 145300563
Gene position: 3982642-3983586 (Clockwise)
Preceding gene: 145300560
Following gene: 145300565
Centisome position: 84.69
GC content: 59.15
Gene sequence:
>945_bases ATGCCGATCAAGATCCCGGATCAGTTACCTGCCGCCGAAGTGCTGGGGCAGGAGAACATCTTCGTGATGACGGAATCCAG GGCCGTCACCCAGAACATCCGCCCATTGCGGGTGTTGATCCTCAACCTGATGCCCAAGAAGATTGAAACCGAGATCCAGC TGATGCGGATGCTCTCCAACTCGCCGCTGCAGGTGGACGTGGATTTGCTGCGGATCGACGATCGGGAGTCGAAGAACACG CCTCAGGCCCATCTCGAGAACTTCTATCACGATTTCGAGCAGGTTCGCGGCAACAACTATGACGGCATGATCATCACGGG GGCACCACTCGGGCTGGTGGAGTTCGAGGAGGTGGTCTATTGGCCGCGCATCGTCGAGATCATAGAGTGGTCCCATCAAC ACGTGACCTCGACCCTGTTCCTCTGCTGGGCCGTACAGGCGGCGCTCAAGGCCCTGTATGGCATGGAGAAGCAGACGCAT GGGGAGAAACTGTCCGGTGTCTATCGCCACCATCGCCTCGATGAGAACGAGCCGCTGCTGCGCGGTTTCGACGACGAGTT CGTCGCGCCTCACTCTCGCTATGCGGCCTTCGACGGGGATCTCATCCGTGCCCACACTGACCTGCAGATCTTTGCCGAGT CCGAGGAAGCGGGGGTCTACCTGGCGGCCACCAAGGATTGTCGTCAGGTATTTGTCACCGGCCACCCTGAATACGATGTG CTGACCCTGGATGGAGAGTATCAGCGGGATCTGGCGGCCGGGCTCGACCCCGTCATTCCGGTCAACTACTACCCGAACAA TGATCCTGCCCTGCCGCCGCGCGCCAGCTGGCGCAGCCACGGCCATCTGTTGTTTTCCAACTGGCTCAACTACTACGTCT ACCAGCTCACCAGCTATCGGGTGGAAGATATCGGCAAGGTGTTTACCTACCAGCAACCCAAGTAG
Upstream 100 bases:
>100_bases TGGGGGTGAATACAAAAGGTATCTGATGACAGGCTGGGTGGCTTTGTTATAGGCTTCTGGATGTCCAGACATATTTACCG ATGCAGTACAGGGAGTAAGC
Downstream 100 bases:
>100_bases GGCCAGCGGTCAGGGTCAGTCGGCCTGATCCAGCCGCGTGGCCAGGGCATCCAGCCATTGGCGATGCGCCGGCAGGGTGA AGGCCTTGGGCCTGTGGGCC
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPIKIPDQLPAAEVLGQENIFVMTESRAVTQNIRPLRVLILNLMPKKIETEIQLMRMLSNSPLQVDVDLLRIDDRESKNT PQAHLENFYHDFEQVRGNNYDGMIITGAPLGLVEFEEVVYWPRIVEIIEWSHQHVTSTLFLCWAVQAALKALYGMEKQTH GEKLSGVYRHHRLDENEPLLRGFDDEFVAPHSRYAAFDGDLIRAHTDLQIFAESEEAGVYLAATKDCRQVFVTGHPEYDV LTLDGEYQRDLAAGLDPVIPVNYYPNNDPALPPRASWRSHGHLLFSNWLNYYVYQLTSYRVEDIGKVFTYQQPK
Sequences:
>Translated_314_residues MPIKIPDQLPAAEVLGQENIFVMTESRAVTQNIRPLRVLILNLMPKKIETEIQLMRMLSNSPLQVDVDLLRIDDRESKNT PQAHLENFYHDFEQVRGNNYDGMIITGAPLGLVEFEEVVYWPRIVEIIEWSHQHVTSTLFLCWAVQAALKALYGMEKQTH GEKLSGVYRHHRLDENEPLLRGFDDEFVAPHSRYAAFDGDLIRAHTDLQIFAESEEAGVYLAATKDCRQVFVTGHPEYDV LTLDGEYQRDLAAGLDPVIPVNYYPNNDPALPPRASWRSHGHLLFSNWLNYYVYQLTSYRVEDIGKVFTYQQPK >Mature_313_residues PIKIPDQLPAAEVLGQENIFVMTESRAVTQNIRPLRVLILNLMPKKIETEIQLMRMLSNSPLQVDVDLLRIDDRESKNTP QAHLENFYHDFEQVRGNNYDGMIITGAPLGLVEFEEVVYWPRIVEIIEWSHQHVTSTLFLCWAVQAALKALYGMEKQTHG EKLSGVYRHHRLDENEPLLRGFDDEFVAPHSRYAAFDGDLIRAHTDLQIFAESEEAGVYLAATKDCRQVFVTGHPEYDVL TLDGEYQRDLAAGLDPVIPVNYYPNNDPALPPRASWRSHGHLLFSNWLNYYVYQLTSYRVEDIGKVFTYQQPK
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=299, Percent_Identity=66.8896321070234, Blast_Score=425, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 36186; Mature: 36055
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKIPDQLPAAEVLGQENIFVMTESRAVTQNIRPLRVLILNLMPKKIETEIQLMRMLSN CCCCCCCCCCHHHHCCCCCEEEEECCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVDVDLLRIDDRESKNTPQAHLENFYHDFEQVRGNNYDGMIITGAPLGLVEFEEVVY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHH WPRIVEIIEWSHQHVTSTLFLCWAVQAALKALYGMEKQTHGEKLSGVYRHHRLDENEPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCHH RGFDDEFVAPHSRYAAFDGDLIRAHTDLQIFAESEEAGVYLAATKDCRQVFVTGHPEYDV CCCCCCCCCCCCCEEECCCCEEEEECCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEE LTLDGEYQRDLAAGLDPVIPVNYYPNNDPALPPRASWRSHGHLLFSNWLNYYVYQLTSYR EEECCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VEDIGKVFTYQQPK HHHHHHHCCCCCCC >Mature Secondary Structure PIKIPDQLPAAEVLGQENIFVMTESRAVTQNIRPLRVLILNLMPKKIETEIQLMRMLSN CCCCCCCCCHHHHCCCCCEEEEECCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVDVDLLRIDDRESKNTPQAHLENFYHDFEQVRGNNYDGMIITGAPLGLVEFEEVVY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHH WPRIVEIIEWSHQHVTSTLFLCWAVQAALKALYGMEKQTHGEKLSGVYRHHRLDENEPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCCCCHH RGFDDEFVAPHSRYAAFDGDLIRAHTDLQIFAESEEAGVYLAATKDCRQVFVTGHPEYDV CCCCCCCCCCCCCEEECCCCEEEEECCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEE LTLDGEYQRDLAAGLDPVIPVNYYPNNDPALPPRASWRSHGHLLFSNWLNYYVYQLTSYR EEECCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VEDIGKVFTYQQPK HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA