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The map label for this gene is yfmJ [H]

Identifier: 145300447

GI number: 145300447

Start: 3862655

End: 3863659

Strand: Direct

Name: yfmJ [H]

Synonym: ASA_3573

Alternate gene names: 145300447

Gene position: 3862655-3863659 (Clockwise)

Preceding gene: 145300446

Following gene: 145300448

Centisome position: 82.14

GC content: 62.59

Gene sequence:

>1005_bases
ATGAGTCTGCTCAGTCATCAAATCCAGCTGCTGCGCCGCCCGGTCGGTATGCCCAGTCAGGACGATTTCATCCAGGCCGA
GGTCGCGCTGCCCGAGTTACAGGAAGGGGAAGTGCTGGTCGCCAACCAATGGCTGTCAGTGGACCCCTACATGCACGGTC
GCATGACAGAGGCCAAGAGCTATGTACCGCCCTTTGCCCTGCACAGTGCGCTCGATGGCGGTGCCATCGGTACTGTGCAG
GACTCGCGCCATCCCGACTTTGCTGTTGGTGATCGGGTGAGCAGCATGCTGGGCTGGCGCGATAGCCTGGTCGCCAAGGC
CGAACAGCTGACTCGCCTGCCCGACACAACACTGCCAGCCCAGTTATTCTTGGGAGCCCTCGGCATGCCGGGCATGACCG
CCTGGGTCGGGCTCAACCGCATCGCCAAGCTGCAAGCCGGCGAAACCGTGCTGGTGTCGGCGGCCTCCGGCGCGGTCGGA
TCCATGGTGGTGCAACTCGCCAAGCGGGCGGGGGCCAGAGTGATCGGTTCCACCGGCTCGGCCGACAAGGTCGCCTACCT
CAAGACGCTGGGGGCTGACGAGGTGATCAACTACCGTGAAACCCCGGATCTCGATGCCGAGCTGACGCGACTCGCCCCGG
AAGGCATCAAGGTCTACTTCGAGAACGTGGGCGGCGCCATGCTGGATGCAGCTCTCAACAACATGGCGGTACACGGTCGC
ATAGTGCTGTGTGGCCTCATTGAGCAGTACAACAGCAAGGGCGAGGCGAGCGGCCCGCGCAACCTCTCTCAGGTGATCCG
CAAACGCCTCACCATGCAGGGGCTTATCGTGTCTGATCACTGGCAGCACTACGGCGAGTTTCTGGCCGAGGTGATCCCGG
CATTCGAGGCCGGTGCACTGCAAGCCGAGGAGACCATCTATCAGGGGCTGGCCAGCATGCCGCAGGCCTTTATCGGTCTG
TTCGAAGGACGCAATACTGGCAAGATGCTGGTCAAGCTGGACTAA

Upstream 100 bases:

>100_bases
TAGTGCGGCTGGCCCACCAGACCTGCCCCTTCTCAAATGCCATTCGGGGCAATGTCGTCACCCGCCTGCGGCTAAACGAT
ATCGAACTGGAGGAAAAACA

Downstream 100 bases:

>100_bases
GTCACCGGACTGGACCATCACACAGCCAGCAACTTGCATGACGGGCCCAACCGACCTAAGGTGGGCCCGTTTTTATGGTG
CAATCCCGTTTCGACAAGGA

Product: alcohol dehydrogenase, zinc-containing

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSLLSHQIQLLRRPVGMPSQDDFIQAEVALPELQEGEVLVANQWLSVDPYMHGRMTEAKSYVPPFALHSALDGGAIGTVQ
DSRHPDFAVGDRVSSMLGWRDSLVAKAEQLTRLPDTTLPAQLFLGALGMPGMTAWVGLNRIAKLQAGETVLVSAASGAVG
SMVVQLAKRAGARVIGSTGSADKVAYLKTLGADEVINYRETPDLDAELTRLAPEGIKVYFENVGGAMLDAALNNMAVHGR
IVLCGLIEQYNSKGEASGPRNLSQVIRKRLTMQGLIVSDHWQHYGEFLAEVIPAFEAGALQAEETIYQGLASMPQAFIGL
FEGRNTGKMLVKLD

Sequences:

>Translated_334_residues
MSLLSHQIQLLRRPVGMPSQDDFIQAEVALPELQEGEVLVANQWLSVDPYMHGRMTEAKSYVPPFALHSALDGGAIGTVQ
DSRHPDFAVGDRVSSMLGWRDSLVAKAEQLTRLPDTTLPAQLFLGALGMPGMTAWVGLNRIAKLQAGETVLVSAASGAVG
SMVVQLAKRAGARVIGSTGSADKVAYLKTLGADEVINYRETPDLDAELTRLAPEGIKVYFENVGGAMLDAALNNMAVHGR
IVLCGLIEQYNSKGEASGPRNLSQVIRKRLTMQGLIVSDHWQHYGEFLAEVIPAFEAGALQAEETIYQGLASMPQAFIGL
FEGRNTGKMLVKLD
>Mature_333_residues
SLLSHQIQLLRRPVGMPSQDDFIQAEVALPELQEGEVLVANQWLSVDPYMHGRMTEAKSYVPPFALHSALDGGAIGTVQD
SRHPDFAVGDRVSSMLGWRDSLVAKAEQLTRLPDTTLPAQLFLGALGMPGMTAWVGLNRIAKLQAGETVLVSAASGAVGS
MVVQLAKRAGARVIGSTGSADKVAYLKTLGADEVINYRETPDLDAELTRLAPEGIKVYFENVGGAMLDAALNNMAVHGRI
VLCGLIEQYNSKGEASGPRNLSQVIRKRLTMQGLIVSDHWQHYGEFLAEVIPAFEAGALQAEETIYQGLASMPQAFIGLF
EGRNTGKMLVKLD

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=332, Percent_Identity=36.7469879518072, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI226059133, Length=332, Percent_Identity=36.7469879518072, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI226246682, Length=348, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI226246680, Length=348, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI22748929, Length=348, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI226056130, Length=280, Percent_Identity=37.5, Blast_Score=175, Evalue=4e-44,
Organism=Homo sapiens, GI28557745, Length=331, Percent_Identity=30.5135951661631, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI194239674, Length=229, Percent_Identity=28.3842794759825, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI13236495, Length=229, Percent_Identity=28.3842794759825, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI22538446, Length=211, Percent_Identity=26.0663507109005, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI22538444, Length=211, Percent_Identity=26.0663507109005, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI226510941, Length=330, Percent_Identity=36.969696969697, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1790485, Length=262, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI133901712, Length=345, Percent_Identity=30.1449275362319, Blast_Score=147, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI133901710, Length=345, Percent_Identity=30.1449275362319, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17507255, Length=241, Percent_Identity=28.6307053941909, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323504, Length=334, Percent_Identity=26.3473053892216, Blast_Score=109, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6319520, Length=287, Percent_Identity=26.1324041811847, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35969; Mature: 35838

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLSHQIQLLRRPVGMPSQDDFIQAEVALPELQEGEVLVANQWLSVDPYMHGRMTEAKS
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEECCCCCCCCHHHHHH
YVPPFALHSALDGGAIGTVQDSRHPDFAVGDRVSSMLGWRDSLVAKAEQLTRLPDTTLPA
CCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QLFLGALGMPGMTAWVGLNRIAKLQAGETVLVSAASGAVGSMVVQLAKRAGARVIGSTGS
HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEECCCCC
ADKVAYLKTLGADEVINYRETPDLDAELTRLAPEGIKVYFENVGGAMLDAALNNMAVHGR
CCHHHHHHHCCHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCH
IVLCGLIEQYNSKGEASGPRNLSQVIRKRLTMQGLIVSDHWQHYGEFLAEVIPAFEAGAL
HHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHCCCC
QAEETIYQGLASMPQAFIGLFEGRNTGKMLVKLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure 
SLLSHQIQLLRRPVGMPSQDDFIQAEVALPELQEGEVLVANQWLSVDPYMHGRMTEAKS
CHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEECCCCCCCCHHHHHH
YVPPFALHSALDGGAIGTVQDSRHPDFAVGDRVSSMLGWRDSLVAKAEQLTRLPDTTLPA
CCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QLFLGALGMPGMTAWVGLNRIAKLQAGETVLVSAASGAVGSMVVQLAKRAGARVIGSTGS
HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCEEECCCCC
ADKVAYLKTLGADEVINYRETPDLDAELTRLAPEGIKVYFENVGGAMLDAALNNMAVHGR
CCHHHHHHHCCHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCH
IVLCGLIEQYNSKGEASGPRNLSQVIRKRLTMQGLIVSDHWQHYGEFLAEVIPAFEAGAL
HHEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHHHCCCC
QAEETIYQGLASMPQAFIGLFEGRNTGKMLVKLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]