| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is metQ [H]
Identifier: 145300264
GI number: 145300264
Start: 3655447
End: 3656247
Strand: Direct
Name: metQ [H]
Synonym: ASA_3380
Alternate gene names: 145300264
Gene position: 3655447-3656247 (Clockwise)
Preceding gene: 145300263
Following gene: 145300265
Centisome position: 77.74
GC content: 57.05
Gene sequence:
>801_bases ATGAAATTTGGCATTAAATCCGTTGCGGCTGCCTTGTTGGCTGGCCTGGTACTGGCCGGTTGCGGTCAAAAAGAAGAGAG CAAGACCCTGAAAGTAGGCGCCATTGCCGGGGCGGAATCCCAGCTGGTGGAAGCCGCGGCCAAGGTCGCCAAGGACAAGT TCGGTCTGGATGTCGAAGTGGTCACCTTCTCCGACTTTGCCACCCCGAACGTGGCCCTGAACGATGGCAGCATCGATCTG AACGCCTTCCAGCACAAACCGTATCTGGATAGCCAGGTCAAGGATCGCGGCTTCGATCTGGTACCGGTTGGCAACACCTT CGTCTACCCCATCGCCGGCTACTCCAAGAAGATCAAGGCCCTGGCCGATCTGAAAGAGGGCGCGCAAATCGCCGTGCCGA ACGACCCGACCAACCTGGGCCGCTCTCTGATCCTGCTGCAAAAGCAGGGCCTGCTGACCCTGAAGGAAGGCACTGGTCTG GAAGCGACTGTGCTCGACATCGCCAGCAACCCGAAAAAGCTGAAGATTGTTGAACTGGAAGCGGCACAGCTGCCACGCTC CCTGGAAGATGTGGACCTGGCCATCATCAATACCGTGTATGCCTCCCAGATCGATCTGCTGCCAGGCCGTGACGGTCTGT TCGTGGAAGACAAGGATTCTCCCTATGTCAACCTGCTCGTCTCCCGTGGCAACAACAAGGATGACGCCAAGGTGAAGGAG TTCGTCCAGGCCTTCCAGAGCGACGAAGTGTACAAAACTGCTGACGAATTGTTCAAAGGCGGCATCGTCAAAGGTTGGTA A
Upstream 100 bases:
>100_bases TGATTCTGGTTTTACTGGTTCAAATCATCCAGAGCGCGGGTGAGCGCCTGGTCAACACATGTGATCATCGTTAATCGTCG ATTTCTGACAGGAGGTTTTT
Downstream 100 bases:
>100_bases TCACTCACTCAGCAAAAAAGGCCACGCCAAGCGTGGCCTTTTTTATTGCCGCGGTTATCATAACCGGGAGCACGGCAACA CGAACGTAACAGAACATGAA
Product: ABC-type methionine transporter, periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKFGIKSVAAALLAGLVLAGCGQKEESKTLKVGAIAGAESQLVEAAAKVAKDKFGLDVEVVTFSDFATPNVALNDGSIDL NAFQHKPYLDSQVKDRGFDLVPVGNTFVYPIAGYSKKIKALADLKEGAQIAVPNDPTNLGRSLILLQKQGLLTLKEGTGL EATVLDIASNPKKLKIVELEAAQLPRSLEDVDLAIINTVYASQIDLLPGRDGLFVEDKDSPYVNLLVSRGNNKDDAKVKE FVQAFQSDEVYKTADELFKGGIVKGW
Sequences:
>Translated_266_residues MKFGIKSVAAALLAGLVLAGCGQKEESKTLKVGAIAGAESQLVEAAAKVAKDKFGLDVEVVTFSDFATPNVALNDGSIDL NAFQHKPYLDSQVKDRGFDLVPVGNTFVYPIAGYSKKIKALADLKEGAQIAVPNDPTNLGRSLILLQKQGLLTLKEGTGL EATVLDIASNPKKLKIVELEAAQLPRSLEDVDLAIINTVYASQIDLLPGRDGLFVEDKDSPYVNLLVSRGNNKDDAKVKE FVQAFQSDEVYKTADELFKGGIVKGW >Mature_266_residues MKFGIKSVAAALLAGLVLAGCGQKEESKTLKVGAIAGAESQLVEAAAKVAKDKFGLDVEVVTFSDFATPNVALNDGSIDL NAFQHKPYLDSQVKDRGFDLVPVGNTFVYPIAGYSKKIKALADLKEGAQIAVPNDPTNLGRSLILLQKQGLLTLKEGTGL EATVLDIASNPKKLKIVELEAAQLPRSLEDVDLAIINTVYASQIDLLPGRDGLFVEDKDSPYVNLLVSRGNNKDDAKVKE FVQAFQSDEVYKTADELFKGGIVKGW
Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=271, Percent_Identity=66.4206642066421, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1790093, Length=249, Percent_Identity=57.429718875502, Blast_Score=291, Evalue=4e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 - InterPro: IPR004478 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 28507; Mature: 28507
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFGIKSVAAALLAGLVLAGCGQKEESKTLKVGAIAGAESQLVEAAAKVAKDKFGLDVEV CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEE VTFSDFATPNVALNDGSIDLNAFQHKPYLDSQVKDRGFDLVPVGNTFVYPIAGYSKKIKA EEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHCCCEEEECCCEEEEEECCCHHHHHH LADLKEGAQIAVPNDPTNLGRSLILLQKQGLLTLKEGTGLEATVLDIASNPKKLKIVELE HHHHHCCCEEECCCCCHHHCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEEEC AAQLPRSLEDVDLAIINTVYASQIDLLPGRDGLFVEDKDSPYVNLLVSRGNNKDDAKVKE HHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCEEEEEEECCCCCCHHHHHH FVQAFQSDEVYKTADELFKGGIVKGW HHHHHCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKFGIKSVAAALLAGLVLAGCGQKEESKTLKVGAIAGAESQLVEAAAKVAKDKFGLDVEV CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEE VTFSDFATPNVALNDGSIDLNAFQHKPYLDSQVKDRGFDLVPVGNTFVYPIAGYSKKIKA EEECCCCCCCEEEECCCEEEEEECCCCCCCCHHHHCCCEEEECCCEEEEEECCCHHHHHH LADLKEGAQIAVPNDPTNLGRSLILLQKQGLLTLKEGTGLEATVLDIASNPKKLKIVELE HHHHHCCCEEECCCCCHHHCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEEEC AAQLPRSLEDVDLAIINTVYASQIDLLPGRDGLFVEDKDSPYVNLLVSRGNNKDDAKVKE HHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCEEEEEEECCCCCCHHHHHH FVQAFQSDEVYKTADELFKGGIVKGW HHHHHCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]