| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is metI [H]
Identifier: 145300263
GI number: 145300263
Start: 3654872
End: 3655420
Strand: Direct
Name: metI [H]
Synonym: ASA_3379
Alternate gene names: 145300263
Gene position: 3654872-3655420 (Clockwise)
Preceding gene: 145300262
Following gene: 145300264
Centisome position: 77.72
GC content: 59.74
Gene sequence:
>549_bases ATGTCCGAAGCCATGATTAATCTGCTGGTCACCGCCCTCGGTGATACCCTGCTGATGGTGTTTGCCTCCGCCCTGTTTGG CTGCCTGCTTGGCCTGCCCCTTGGGGTAGCACTGCACGTCACCAAGGCGGGCCAGATCCTGGCCAACCCGGCCCTGAACA AGCTGCTCGGCATCCTTGTCAACATTGGCCGCTCCGTGCCCTTCATCGCCCGCCTGGTGGAAGGTGCTCTGATGGAGGTG CCGGACGGCTTGCTGGAAGCGGCCAAGGCCATGGGTGCCAAACCTTTGCAAATCATCACCAAGGTGCTGCTGCCAGAAGC CCTGCCCGGCATCATCAACAGCGTCACCATTACCCTGGTCACGCTGGTGAACTACTCCGCCATGGCCGGTGCCATCGGAG GGGGTGGCCTGGGCGATGTGGGTATTCGCTACGGTTATCAGCGCTTTGACCCCACCGTCATGCTGGCAACCGTTGTGATT CTGGTTTTACTGGTTCAAATCATCCAGAGCGCGGGTGAGCGCCTGGTCAACACATGTGATCATCGTTAA
Upstream 100 bases:
>100_bases TTCGGCTTCCTGCTGGCAGAACTGTTCGGGGATGAGGCCCAGTGCGAGGCGACTCAGCAATTCCTGATAGACAACCATAT TCAGCTGGAGGTAATGGGTT
Downstream 100 bases:
>100_bases TCGTCGATTTCTGACAGGAGGTTTTTATGAAATTTGGCATTAAATCCGTTGCGGCTGCCTTGTTGGCTGGCCTGGTACTG GCCGGTTGCGGTCAAAAAGA
Product: ABC-type methionine transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSEAMINLLVTALGDTLLMVFASALFGCLLGLPLGVALHVTKAGQILANPALNKLLGILVNIGRSVPFIARLVEGALMEV PDGLLEAAKAMGAKPLQIITKVLLPEALPGIINSVTITLVTLVNYSAMAGAIGGGGLGDVGIRYGYQRFDPTVMLATVVI LVLLVQIIQSAGERLVNTCDHR
Sequences:
>Translated_182_residues MSEAMINLLVTALGDTLLMVFASALFGCLLGLPLGVALHVTKAGQILANPALNKLLGILVNIGRSVPFIARLVEGALMEV PDGLLEAAKAMGAKPLQIITKVLLPEALPGIINSVTITLVTLVNYSAMAGAIGGGGLGDVGIRYGYQRFDPTVMLATVVI LVLLVQIIQSAGERLVNTCDHR >Mature_181_residues SEAMINLLVTALGDTLLMVFASALFGCLLGLPLGVALHVTKAGQILANPALNKLLGILVNIGRSVPFIARLVEGALMEVP DGLLEAAKAMGAKPLQIITKVLLPEALPGIINSVTITLVTLVNYSAMAGAIGGGGLGDVGIRYGYQRFDPTVMLATVVIL VLLVQIIQSAGERLVNTCDHR
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=217, Percent_Identity=47.0046082949309, Blast_Score=156, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 18938; Mature: 18807
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAMINLLVTALGDTLLMVFASALFGCLLGLPLGVALHVTKAGQILANPALNKLLGILV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGRSVPFIARLVEGALMEVPDGLLEAAKAMGAKPLQIITKVLLPEALPGIINSVTITLV HHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLVNYSAMAGAIGGGGLGDVGIRYGYQRFDPTVMLATVVILVLLVQIIQSAGERLVNTCD HHHHHHHHHHCCCCCCCHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HR CC >Mature Secondary Structure SEAMINLLVTALGDTLLMVFASALFGCLLGLPLGVALHVTKAGQILANPALNKLLGILV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGRSVPFIARLVEGALMEVPDGLLEAAKAMGAKPLQIITKVLLPEALPGIINSVTITLV HHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLVNYSAMAGAIGGGGLGDVGIRYGYQRFDPTVMLATVVILVLLVQIIQSAGERLVNTCD HHHHHHHHHHCCCCCCCHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]