| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is hutB [H]
Identifier: 145300221
GI number: 145300221
Start: 3607097
End: 3607936
Strand: Direct
Name: hutB [H]
Synonym: ASA_3334
Alternate gene names: 145300221
Gene position: 3607097-3607936 (Clockwise)
Preceding gene: 145300218
Following gene: 145300222
Centisome position: 76.71
GC content: 65.83
Gene sequence:
>840_bases ATGGGCCGTCGTTTTGCCCTCGCACTCAGCCTGCTCGGCTGTTCAGCCCTTTCCCTGTCTGCTGCCGCGCAGGAACGTAT CGTCAGCATAGGCCCGGCCACCACAGAACTCATTCTGGCACTGGGCGGTGAACAGAGCCTGATCGCTACCGACATCAGCA GCACTGAACCGAAAAATCTGCCCAGGGTCGGTTATCACCGCGCCCTCGCCGCCGAGGGGATCCTCAGTCTGGCGCCGACC CGGCTGATCGGCAGCGACGAGATGGGGCCGCCGCCGGCGCTGGCGCAGCTGCGCCGCGCCGGAGTCGAGGTGGACGTGCT GCCGACCGCACCGACCCTCGCCAACCTCAACCAGCGCATCGATACCCTGGCCGGCCTGCTCAATGACCCGGCCGCCGGCA TGCGATTGAAAGCCAAGATCCAGGCCCAGACAGCGCAACTGGCGGCACAGGCGAAGCAGAACAAGCCGCTCAAGGTGGTC TTCCTGCTGCTGCACAAGGGGCAACCCACCAGCATAGCCGGCGGCAATACCACCGCCAGCGCCCTGCTCACCCTGGCGGG CGGCGTCAATCCGGTGGCCCAGCTGAGCGACTACAAGCCCGTCTCCACCGAATCCCTGATCGAGCTGCAACCGGATCTGG TGCTGGTGAGCGGCCGCGACTGGCAGCAGTATCAGGATCCGGAAGCAGTGCTGAGCCAAGTACCCGCGCTCACCGCCACC CCGGCGGGTAAAAACCGGGCCATCCACGCCATCGACGGCCACGCCCTGCAAGGGGGCCTCAGCCTCACCTCGTTGCACCA GGCAAACCAGATCGCCAAGTGGATCAAGCTGGGTTCATGA
Upstream 100 bases:
>100_bases GCCAATGCAATTGATAATCGCTTTCATTCTCAGTGCATTTTTTTCACCGGCTTGATATTCTCGGCGGCAACCCAACTTTA TTCACCCTTCGGAGGTTAGC
Downstream 100 bases:
>100_bases TGCGCCTGCCTCTGCCCTGGCTTTTCGCGCTCACCGGCGGAGCGCTGGCGCTGCTGCTGGTCGGGTCGCTGGCGACCGGC CCCATGGCGCTCTCCCTCGG
Product: ABC-type hemin transporter, periplasmic component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MGRRFALALSLLGCSALSLSAAAQERIVSIGPATTELILALGGEQSLIATDISSTEPKNLPRVGYHRALAAEGILSLAPT RLIGSDEMGPPPALAQLRRAGVEVDVLPTAPTLANLNQRIDTLAGLLNDPAAGMRLKAKIQAQTAQLAAQAKQNKPLKVV FLLLHKGQPTSIAGGNTTASALLTLAGGVNPVAQLSDYKPVSTESLIELQPDLVLVSGRDWQQYQDPEAVLSQVPALTAT PAGKNRAIHAIDGHALQGGLSLTSLHQANQIAKWIKLGS
Sequences:
>Translated_279_residues MGRRFALALSLLGCSALSLSAAAQERIVSIGPATTELILALGGEQSLIATDISSTEPKNLPRVGYHRALAAEGILSLAPT RLIGSDEMGPPPALAQLRRAGVEVDVLPTAPTLANLNQRIDTLAGLLNDPAAGMRLKAKIQAQTAQLAAQAKQNKPLKVV FLLLHKGQPTSIAGGNTTASALLTLAGGVNPVAQLSDYKPVSTESLIELQPDLVLVSGRDWQQYQDPEAVLSQVPALTAT PAGKNRAIHAIDGHALQGGLSLTSLHQANQIAKWIKLGS >Mature_278_residues GRRFALALSLLGCSALSLSAAAQERIVSIGPATTELILALGGEQSLIATDISSTEPKNLPRVGYHRALAAEGILSLAPTR LIGSDEMGPPPALAQLRRAGVEVDVLPTAPTLANLNQRIDTLAGLLNDPAAGMRLKAKIQAQTAQLAAQAKQNKPLKVVF LLLHKGQPTSIAGGNTTASALLTLAGGVNPVAQLSDYKPVSTESLIELQPDLVLVSGRDWQQYQDPEAVLSQVPALTATP AGKNRAIHAIDGHALQGGLSLTSLHQANQIAKWIKLGS
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 29044; Mature: 28913
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRFALALSLLGCSALSLSAAAQERIVSIGPATTELILALGGEQSLIATDISSTEPKNL CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEEECCCCCCCCCC PRVGYHRALAAEGILSLAPTRLIGSDEMGPPPALAQLRRAGVEVDVLPTAPTLANLNQRI CCHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHH DTLAGLLNDPAAGMRLKAKIQAQTAQLAAQAKQNKPLKVVFLLLHKGQPTSIAGGNTTAS HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHH ALLTLAGGVNPVAQLSDYKPVSTESLIELQPDLVLVSGRDWQQYQDPEAVLSQVPALTAT HHHHHHCCCCHHHHHCCCCCCCCHHHEEECCCEEEEECCCCHHHCCHHHHHHHCCCCEEC PAGKNRAIHAIDGHALQGGLSLTSLHQANQIAKWIKLGS CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRRFALALSLLGCSALSLSAAAQERIVSIGPATTELILALGGEQSLIATDISSTEPKNL CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEEEECCCCCCCCCC PRVGYHRALAAEGILSLAPTRLIGSDEMGPPPALAQLRRAGVEVDVLPTAPTLANLNQRI CCHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHH DTLAGLLNDPAAGMRLKAKIQAQTAQLAAQAKQNKPLKVVFLLLHKGQPTSIAGGNTTAS HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHH ALLTLAGGVNPVAQLSDYKPVSTESLIELQPDLVLVSGRDWQQYQDPEAVLSQVPALTAT HHHHHHCCCCHHHHHCCCCCCCCHHHEEECCCEEEEECCCCHHHCCHHHHHHHCCCCEEC PAGKNRAIHAIDGHALQGGLSLTSLHQANQIAKWIKLGS CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]