| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is arnT [H]
Identifier: 145300200
GI number: 145300200
Start: 3579947
End: 3581590
Strand: Direct
Name: arnT [H]
Synonym: ASA_3311
Alternate gene names: 145300200
Gene position: 3579947-3581590 (Clockwise)
Preceding gene: 145300199
Following gene: 145300201
Centisome position: 76.13
GC content: 63.56
Gene sequence:
>1644_bases ATGAAGTTGACCAAGTGGGCCCTGCCCCTGTTCTTTCTCTTGTTTTACCTGCTGCCCCTCGACCAGCGGCCGCTTTGGAG CCCCGACGAGAACCGTTACGCCGAGATAAGCCGTGAGATGGTGAGCACGGGGGATTGGGTCGTGCCCCACTTCCTGGGCT TGCGCTATTTCGAGAAGCCCATCGCCGGTTACTGGTTCAACAGCATCAGCCAGCAGCTGTTTGGTGACACCAACTTCGCC GTGCGCTTCGCCTCGGCCGCCGCCACAGGCCTGAGCGCCCTGCTGATCGTCTGGTTCGCGCTGCAGCTTTGGCAGTGCCG GCGCAAGGCCTTCCTTGCCGGGCTCATCTACCTGTCGCTGTTGATCGTCTATGGCATAGGCACCTACAGCGTGCTCGATG CCATGGTCACCCTCTGGCTCAACGCGGCCATGGTCAGCTTCTATCTCATCCGGCAGGAGGGTCCGCTGCGAACCCGGGTC GCCGGCTACCTGCTGTTTGGCCTGGCCTGCGGCATGGGCTTTCTCACCAAGGGCTTCATCGCCCTGGCGGTGCCTGTCAT CGTCATAGTGCCCTACGTCATTTATCAGCGCCGCCTGCCCGAACTGCTGCGCTTCGGCCCATTGGCGATGGTGAGTGCCG CCCTGCTGGCCGCCCCCTGGGCCATCGCCGTACACCTGCGGGAGCCCGATTACTGGCACTACTTCTTCTGGGTCGAACAC ATACAGCGCTTCGCGGCGGATAACGCCCAGCACAAGGCGCCGTTCTGGTACTACCTGCCCATGGGGCTGCTCGGCACCCT GCCCTGGCTGGGCCTGCTGCCCGGCGCACTGCGCAAGGGCTGGCAGGATCGCAAGATAAGTCCTGAGACCCTCTATCTGC TGGCCTGGGTGGTACTGCCATTGCTGTTCTTCAGCGTTGCCAAGGGCAAGCTGCTCACCTATATCCTGCCCTGCTTCGCC CCGCTGGCCATGCTGCTGGCCGCCAGCGCCGTCGACCTGCTCAAGGAAGGTAAAGAGCGAGCTTTCAGGGTCAATGCCTG GCTGAACGGCCTGTTCGGCCTTATCTGCCTGGCGGTGCTCGCCGTGCTGGCCTTATCCCCCAGCCACGCCGTCTACGGCG AAGAGGATCATGGGGCGCTGGCGGTGGCCATGGTCATCTTTGCCGGCTGGGCTCTGCTTGGTTTCATCCAGTTGAAGGAT GTCAGCCGCCGCTGGACCCTGAGCGCGCTCTGCCCCATGGTGCTGGCGGTGGGTCTGCCCTGGGCATTGCCACAATCCCT GATCGACTCCAAGCTGCCGGAGCGCTTCATCGAGGCCAATCAGACAGTGCTGATGGACTCCAGCTCCCTGCTGGCCAACG ATGTGGGGCTGGCCTCCTCCCTCGCCTGGGGCACCCGACGCAGCGAGATCCAGCTATTCGACAGCAAGGGGGAGGTGCAT TACGGCTTGAGTTACCCGGATGCCAAGGAGCGCTACGTGACCCGGTCCGACTTCCCGGCCTGGCTGGCCGAGGCGCGTAA AAACGGCCAGGTTGCCCTGTTGCTGAAGACGGATAAAGACGGCAGCACGGGATCTCTGCCACCGGCCGACGAGACGATAG TGAGCCACCGGCTGACCCTGCTTGTCTACCACGGGGCCCGCTGA
Upstream 100 bases:
>100_bases AGGGATGGCTTGGCTGCAAGGCCGATGTCTAGACCCTTACTCACATCGCGGACGTCATGATGCGCCATTGCGCTCACCAC ACAATGCTACAGAGGATGTC
Downstream 100 bases:
>100_bases TGGACATGCTGCTGCTTGTGCTGGTGTGCCTGCTGACCTGCAGCGGCCAGATGCTGCAAAAACAGGCAGTCATCAGCTGG CAGCGCCAGCCATGCAGCCA
Product: 4-amino-4-deoxy-L-arabinose transferase
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKLTKWALPLFFLLFYLLPLDQRPLWSPDENRYAEISREMVSTGDWVVPHFLGLRYFEKPIAGYWFNSISQQLFGDTNFA VRFASAAATGLSALLIVWFALQLWQCRRKAFLAGLIYLSLLIVYGIGTYSVLDAMVTLWLNAAMVSFYLIRQEGPLRTRV AGYLLFGLACGMGFLTKGFIALAVPVIVIVPYVIYQRRLPELLRFGPLAMVSAALLAAPWAIAVHLREPDYWHYFFWVEH IQRFAADNAQHKAPFWYYLPMGLLGTLPWLGLLPGALRKGWQDRKISPETLYLLAWVVLPLLFFSVAKGKLLTYILPCFA PLAMLLAASAVDLLKEGKERAFRVNAWLNGLFGLICLAVLAVLALSPSHAVYGEEDHGALAVAMVIFAGWALLGFIQLKD VSRRWTLSALCPMVLAVGLPWALPQSLIDSKLPERFIEANQTVLMDSSSLLANDVGLASSLAWGTRRSEIQLFDSKGEVH YGLSYPDAKERYVTRSDFPAWLAEARKNGQVALLLKTDKDGSTGSLPPADETIVSHRLTLLVYHGAR
Sequences:
>Translated_547_residues MKLTKWALPLFFLLFYLLPLDQRPLWSPDENRYAEISREMVSTGDWVVPHFLGLRYFEKPIAGYWFNSISQQLFGDTNFA VRFASAAATGLSALLIVWFALQLWQCRRKAFLAGLIYLSLLIVYGIGTYSVLDAMVTLWLNAAMVSFYLIRQEGPLRTRV AGYLLFGLACGMGFLTKGFIALAVPVIVIVPYVIYQRRLPELLRFGPLAMVSAALLAAPWAIAVHLREPDYWHYFFWVEH IQRFAADNAQHKAPFWYYLPMGLLGTLPWLGLLPGALRKGWQDRKISPETLYLLAWVVLPLLFFSVAKGKLLTYILPCFA PLAMLLAASAVDLLKEGKERAFRVNAWLNGLFGLICLAVLAVLALSPSHAVYGEEDHGALAVAMVIFAGWALLGFIQLKD VSRRWTLSALCPMVLAVGLPWALPQSLIDSKLPERFIEANQTVLMDSSSLLANDVGLASSLAWGTRRSEIQLFDSKGEVH YGLSYPDAKERYVTRSDFPAWLAEARKNGQVALLLKTDKDGSTGSLPPADETIVSHRLTLLVYHGAR >Mature_547_residues MKLTKWALPLFFLLFYLLPLDQRPLWSPDENRYAEISREMVSTGDWVVPHFLGLRYFEKPIAGYWFNSISQQLFGDTNFA VRFASAAATGLSALLIVWFALQLWQCRRKAFLAGLIYLSLLIVYGIGTYSVLDAMVTLWLNAAMVSFYLIRQEGPLRTRV AGYLLFGLACGMGFLTKGFIALAVPVIVIVPYVIYQRRLPELLRFGPLAMVSAALLAAPWAIAVHLREPDYWHYFFWVEH IQRFAADNAQHKAPFWYYLPMGLLGTLPWLGLLPGALRKGWQDRKISPETLYLLAWVVLPLLFFSVAKGKLLTYILPCFA PLAMLLAASAVDLLKEGKERAFRVNAWLNGLFGLICLAVLAVLALSPSHAVYGEEDHGALAVAMVIFAGWALLGFIQLKD VSRRWTLSALCPMVLAVGLPWALPQSLIDSKLPERFIEANQTVLMDSSSLLANDVGLASSLAWGTRRSEIQLFDSKGEVH YGLSYPDAKERYVTRSDFPAWLAEARKNGQVALLLKTDKDGSTGSLPPADETIVSHRLTLLVYHGAR
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=552, Percent_Identity=49.4565217391304, Blast_Score=537, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 61207; Mature: 61207
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTKWALPLFFLLFYLLPLDQRPLWSPDENRYAEISREMVSTGDWVVPHFLGLRYFEKP CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IAGYWFNSISQQLFGDTNFAVRFASAAATGLSALLIVWFALQLWQCRRKAFLAGLIYLSL HHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVYGIGTYSVLDAMVTLWLNAAMVSFYLIRQEGPLRTRVAGYLLFGLACGMGFLTKGFI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAVPVIVIVPYVIYQRRLPELLRFGPLAMVSAALLAAPWAIAVHLREPDYWHYFFWVEH HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH IQRFAADNAQHKAPFWYYLPMGLLGTLPWLGLLPGALRKGWQDRKISPETLYLLAWVVLP HHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHH LLFFSVAKGKLLTYILPCFAPLAMLLAASAVDLLKEGKERAFRVNAWLNGLFGLICLAVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH AVLALSPSHAVYGEEDHGALAVAMVIFAGWALLGFIQLKDVSRRWTLSALCPMVLAVGLP HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WALPQSLIDSKLPERFIEANQTVLMDSSSLLANDVGLASSLAWGTRRSEIQLFDSKGEVH CCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEE YGLSYPDAKERYVTRSDFPAWLAEARKNGQVALLLKTDKDGSTGSLPPADETIVSHRLTL ECCCCCCHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHEEE LVYHGAR EEEECCC >Mature Secondary Structure MKLTKWALPLFFLLFYLLPLDQRPLWSPDENRYAEISREMVSTGDWVVPHFLGLRYFEKP CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IAGYWFNSISQQLFGDTNFAVRFASAAATGLSALLIVWFALQLWQCRRKAFLAGLIYLSL HHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVYGIGTYSVLDAMVTLWLNAAMVSFYLIRQEGPLRTRVAGYLLFGLACGMGFLTKGFI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAVPVIVIVPYVIYQRRLPELLRFGPLAMVSAALLAAPWAIAVHLREPDYWHYFFWVEH HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH IQRFAADNAQHKAPFWYYLPMGLLGTLPWLGLLPGALRKGWQDRKISPETLYLLAWVVLP HHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHH LLFFSVAKGKLLTYILPCFAPLAMLLAASAVDLLKEGKERAFRVNAWLNGLFGLICLAVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH AVLALSPSHAVYGEEDHGALAVAMVIFAGWALLGFIQLKDVSRRWTLSALCPMVLAVGLP HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WALPQSLIDSKLPERFIEANQTVLMDSSSLLANDVGLASSLAWGTRRSEIQLFDSKGEVH CCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEE YGLSYPDAKERYVTRSDFPAWLAEARKNGQVALLLKTDKDGSTGSLPPADETIVSHRLTL ECCCCCCHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHEEE LVYHGAR EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA