| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is cheW [H]
Identifier: 145300163
GI number: 145300163
Start: 3534238
End: 3534804
Strand: Direct
Name: cheW [H]
Synonym: ASA_3268
Alternate gene names: 145300163
Gene position: 3534238-3534804 (Clockwise)
Preceding gene: 145300162
Following gene: 145300164
Centisome position: 75.16
GC content: 55.73
Gene sequence:
>567_bases ATGTCAACCGAAGTGGCCGCGCCCCCCAGCACACTGGCCCATGACAATCAGGGCGACGCCCAATACCTGACATTCCTGAT CAATGGCGAGATGTTTGCCATCAATATTCTCGGGGTCAAAGAGATCATCGAGTACGGCAACATCACTCCTATCCCCATGA TGCCAAGCTTCATCCGGGGCGTGATCAATCTCAGGGGAGCTGTGGTATCAGTGGTGGATCTCAATGCCCGCTTTGGCAAT GCCCCTTCCAGCATCACTCGCCGCAGCTGCATCGTCATCATCGAAGGAATACACCCGGATGACTCGGAGCATGGCAATCA GGACATCGGCGTCGTAGTGGATTCGGTATCTGAGGTGCTGACCATTCCCTGCGACGAGATAGAGCCGCCCCCCAGCTTCG GGGCTCACATCCGGGCCGACTTCATTACCGGCATGGGCAAGGTGAATGGCAAGTTCGTCATTCTCATCAATACCGAGAAG GTGCTCTCCATCGACGAAATGGCACAACTCAGCGAACTGACCCAGCAGCAGGAACGACAGCTGGAGCACAGAGTGCAAAC CCCTTAA
Upstream 100 bases:
>100_bases TGTCATGCCTGCCCAACACCCGCTGCACGGCAACACGGCGCCGCAACCCCTGGTTGACGAAGCCGACTTTGTCCGCTTTT AACCGGAGAGACCCATGAGC
Downstream 100 bases:
>100_bases GCAGGGTATTAAAAACAGCAAGGGTGACGCTCACACCACACAGCAATGGCATGTCGCACAAGGATAAGGCTCATGACTCA ATCATTCTTTGGCAATCTCT
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSTEVAAPPSTLAHDNQGDAQYLTFLINGEMFAINILGVKEIIEYGNITPIPMMPSFIRGVINLRGAVVSVVDLNARFGN APSSITRRSCIVIIEGIHPDDSEHGNQDIGVVVDSVSEVLTIPCDEIEPPPSFGAHIRADFITGMGKVNGKFVILINTEK VLSIDEMAQLSELTQQQERQLEHRVQTP
Sequences:
>Translated_188_residues MSTEVAAPPSTLAHDNQGDAQYLTFLINGEMFAINILGVKEIIEYGNITPIPMMPSFIRGVINLRGAVVSVVDLNARFGN APSSITRRSCIVIIEGIHPDDSEHGNQDIGVVVDSVSEVLTIPCDEIEPPPSFGAHIRADFITGMGKVNGKFVILINTEK VLSIDEMAQLSELTQQQERQLEHRVQTP >Mature_187_residues STEVAAPPSTLAHDNQGDAQYLTFLINGEMFAINILGVKEIIEYGNITPIPMMPSFIRGVINLRGAVVSVVDLNARFGNA PSSITRRSCIVIIEGIHPDDSEHGNQDIGVVVDSVSEVLTIPCDEIEPPPSFGAHIRADFITGMGKVNGKFVILINTEKV LSIDEMAQLSELTQQQERQLEHRVQTP
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=168, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 20491; Mature: 20359
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEVAAPPSTLAHDNQGDAQYLTFLINGEMFAINILGVKEIIEYGNITPIPMMPSFIRG CCCCCCCCCCHHCCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHCCCCCCCCCHHHHHH VINLRGAVVSVVDLNARFGNAPSSITRRSCIVIIEGIHPDDSEHGNQDIGVVVDSVSEVL HHHHCCCEEEEEEECCCCCCCCCHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHE TIPCDEIEPPPSFGAHIRADFITGMGKVNGKFVILINTEKVLSIDEMAQLSELTQQQERQ ECCCCCCCCCCCCCCEEEHHHHHCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHH LEHRVQTP HHHHCCCC >Mature Secondary Structure STEVAAPPSTLAHDNQGDAQYLTFLINGEMFAINILGVKEIIEYGNITPIPMMPSFIRG CCCCCCCCCHHCCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHCCCCCCCCCHHHHHH VINLRGAVVSVVDLNARFGNAPSSITRRSCIVIIEGIHPDDSEHGNQDIGVVVDSVSEVL HHHHCCCEEEEEEECCCCCCCCCHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHE TIPCDEIEPPPSFGAHIRADFITGMGKVNGKFVILINTEKVLSIDEMAQLSELTQQQERQ ECCCCCCCCCCCCCCEEEHHHHHCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHH LEHRVQTP HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]