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The map label for this gene is ompK [H]

Identifier: 145300106

GI number: 145300106

Start: 3468025

End: 3468846

Strand: Direct

Name: ompK [H]

Synonym: ASA_3206

Alternate gene names: 145300106

Gene position: 3468025-3468846 (Clockwise)

Preceding gene: 145300105

Following gene: 145300108

Centisome position: 73.75

GC content: 46.84

Gene sequence:

>822_bases
ATGGCCAAATTTACCAAGACTCTGATCGCTGCCGGTCTGCTGGCTGCTGCCGCTACTCCGGCCTTCGCTGCTGACTACAG
CGGTGACATCCACAAAAATGATTACAAGTGGATGCAGTTCAACGTCATGCATACCATCGACCAACGTCCAACTTTCACCG
AAGATGGTAACTACAACGATACCTATCTGGAAATGGAGTTTGGTGGTCGTTCTGGTATGTTTGATCTCTATGGTTATGTT
GACGTATTCGATATTTTCAACTCTCGTCACAGCGATAAGCATGACAAGGGTAATATTTTTATGAAGTTCGCTCCGCGTCT
CTCTCTGGATGCCCTGACCGGTAAAGATCTCTCCTTCGGTCCAGTACAAGAGCTCTACATTGCTACCCTGAACAACGTTG
ATGACTCCATGATGGAGAACATGATCGGTCTGGGTACTGATGTACAGGTGCCTTGGTTCGGTAAAGTTGGCATGAACCTG
TATGCTCGCCATGCAACCGAAAGTGGTTTCGCAGCTGAAGATGGTGACTGGAACGGTTATCAGTTCTCCATGAACTGGTT
CAAACCTTTCTACACCTTCTCCAACGGTAGCTTCGTATCTTACCAAGGTTATCTGGATTATCTGTTTGACCGCGATACCC
ATGGTGATGATTTCTATTCATCCAATGGACTGGGTACTTTCCACGGTATCTACTGGCACTCCGACCGTTACGCTGTTGGT
TACGGTCTGAAATACTTCAACGAAATCTATGGCCTCAACAACAGTGACCTGACCAAATCTACTGGTTTCGGCCACTACTT
CTCCGTTACCTACAAGTTCTAA

Upstream 100 bases:

>100_bases
CGGTGCTTGTTTCTCCGATGAACTTATTTGGCTAGAATCCCTCCCGCTCCTTGTGGGCAGGCTACGGAAAACCTCAACTA
ACGCACAAGAGACCAATAAA

Downstream 100 bases:

>100_bases
TCGAACGGGTAATGTGGACACAAAAAACCGGAGCAGCTGCTCCGGTTTTTTTATGGCTCTGTCATCGAGCCTTTTGCTAT
CGCACTATGTGCAATCGAAC

Product: outer membrane protein OmpK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAKFTKTLIAAGLLAAAATPAFAADYSGDIHKNDYKWMQFNVMHTIDQRPTFTEDGNYNDTYLEMEFGGRSGMFDLYGYV
DVFDIFNSRHSDKHDKGNIFMKFAPRLSLDALTGKDLSFGPVQELYIATLNNVDDSMMENMIGLGTDVQVPWFGKVGMNL
YARHATESGFAAEDGDWNGYQFSMNWFKPFYTFSNGSFVSYQGYLDYLFDRDTHGDDFYSSNGLGTFHGIYWHSDRYAVG
YGLKYFNEIYGLNNSDLTKSTGFGHYFSVTYKF

Sequences:

>Translated_273_residues
MAKFTKTLIAAGLLAAAATPAFAADYSGDIHKNDYKWMQFNVMHTIDQRPTFTEDGNYNDTYLEMEFGGRSGMFDLYGYV
DVFDIFNSRHSDKHDKGNIFMKFAPRLSLDALTGKDLSFGPVQELYIATLNNVDDSMMENMIGLGTDVQVPWFGKVGMNL
YARHATESGFAAEDGDWNGYQFSMNWFKPFYTFSNGSFVSYQGYLDYLFDRDTHGDDFYSSNGLGTFHGIYWHSDRYAVG
YGLKYFNEIYGLNNSDLTKSTGFGHYFSVTYKF
>Mature_272_residues
AKFTKTLIAAGLLAAAATPAFAADYSGDIHKNDYKWMQFNVMHTIDQRPTFTEDGNYNDTYLEMEFGGRSGMFDLYGYVD
VFDIFNSRHSDKHDKGNIFMKFAPRLSLDALTGKDLSFGPVQELYIATLNNVDDSMMENMIGLGTDVQVPWFGKVGMNLY
ARHATESGFAAEDGDWNGYQFSMNWFKPFYTFSNGSFVSYQGYLDYLFDRDTHGDDFYSSNGLGTFHGIYWHSDRYAVGY
GLKYFNEIYGLNNSDLTKSTGFGHYFSVTYKF

Specific function: Serves as receptor for a broad-host-range vibriophage, KVP40 [H]

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli tsx [H]

Homologues:

Organism=Escherichia coli, GI1786612, Length=178, Percent_Identity=34.8314606741573, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003055
- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 31116; Mature: 30985

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFTKTLIAAGLLAAAATPAFAADYSGDIHKNDYKWMQFNVMHTIDQRPTFTEDGNYND
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
TYLEMEFGGRSGMFDLYGYVDVFDIFNSRHSDKHDKGNIFMKFAPRLSLDALTGKDLSFG
EEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCC
PVQELYIATLNNVDDSMMENMIGLGTDVQVPWFGKVGMNLYARHATESGFAAEDGDWNGY
CHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE
QFSMNWFKPFYTFSNGSFVSYQGYLDYLFDRDTHGDDFYSSNGLGTFHGIYWHSDRYAVG
EEEEECCCEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEE
YGLKYFNEIYGLNNSDLTKSTGFGHYFSVTYKF
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
AKFTKTLIAAGLLAAAATPAFAADYSGDIHKNDYKWMQFNVMHTIDQRPTFTEDGNYND
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
TYLEMEFGGRSGMFDLYGYVDVFDIFNSRHSDKHDKGNIFMKFAPRLSLDALTGKDLSFG
EEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCC
PVQELYIATLNNVDDSMMENMIGLGTDVQVPWFGKVGMNLYARHATESGFAAEDGDWNGY
CHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE
QFSMNWFKPFYTFSNGSFVSYQGYLDYLFDRDTHGDDFYSSNGLGTFHGIYWHSDRYAVG
EEEEECCCEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEE
YGLKYFNEIYGLNNSDLTKSTGFGHYFSVTYKF
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]