| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
Click here to switch to the map view.
The map label for this gene is 145299730
Identifier: 145299730
GI number: 145299730
Start: 3008946
End: 3009644
Strand: Direct
Name: 145299730
Synonym: ASA_2807
Alternate gene names: NA
Gene position: 3008946-3009644 (Clockwise)
Preceding gene: 145299728
Following gene: 145299731
Centisome position: 63.99
GC content: 61.23
Gene sequence:
>699_bases ATGCCCAGTTATTTGTGGTGGCCACTGCTGGCCTGGATGCTGCCCCTCGCTGGCGCCCTCGGCAGTCGCATGCATCTCTG GCCCTGGTGGGCAGGCTTCGCCCTCTGTCTCGTCAGCGCCCTGATAGCCCTTGGTCTCTTGCTGCACCTGCCCTGGAGCC GGCACAAGGTGCCAAGCCTGTGGGGCATAGTTCCCCTGTTGCTGCCCCTGCTGTTTGTGGTGCAAGCACTGCGCATGCCG CTGACCAACGATGTCAGCACGGATCCCTATCATCCCCCCGCCCTTGCCTGGGCTGCCGAACTGAGAAGCCCGCAGGATCT GCCGATAAATCCGGCCCCCCTGCAAGTATTTGAGAAAAATCCCGGTCCTCTCTATACCAGAGCCTCCCCGGTCGAGGTGA TCACGGAGGCCAGCGAGCTGATGGAAGAGCTCGGCTGGCAGCAACGACCGAGCCCAACCGGCATTGATGCCGTCGTCACC TCTCGCTGGTTCGGCTTTCAGGATGATGTGGCCTTGAGGGTCTTTGCGGGCCCCAAGGAGACCCGAGTCGACATGCGCTC TGCCTCCCGTCAGGGGCGCAGCGATCTGGGGGCGAATCGGGCTCGGATCCATGCATTTCTGGATCTGCTCAACGAACGGT TAGGCGGCGCCTATAAACCCAAGATGAAGAAAATTGAAGAGGATCAGTATGCGCGTTGA
Upstream 100 bases:
>100_bases TTTGGAAAAGCAGCAGGATTGAGATAAATTTACTAACGTTATCAGTCAATTAAGTTTATCCTTCTGGGCACATGTCCATC ATAACCAGTGGATCCCCGTT
Downstream 100 bases:
>100_bases GGTCAAACCGGATCGGGAATATGCCTGGTTTATCCGCCCCTTTTTCTGGCTGCAAAAACGCAACTACGGTCAGGTGCTGA TCCCCGGCAAATGCTGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MPSYLWWPLLAWMLPLAGALGSRMHLWPWWAGFALCLVSALIALGLLLHLPWSRHKVPSLWGIVPLLLPLLFVVQALRMP LTNDVSTDPYHPPALAWAAELRSPQDLPINPAPLQVFEKNPGPLYTRASPVEVITEASELMEELGWQQRPSPTGIDAVVT SRWFGFQDDVALRVFAGPKETRVDMRSASRQGRSDLGANRARIHAFLDLLNERLGGAYKPKMKKIEEDQYAR
Sequences:
>Translated_232_residues MPSYLWWPLLAWMLPLAGALGSRMHLWPWWAGFALCLVSALIALGLLLHLPWSRHKVPSLWGIVPLLLPLLFVVQALRMP LTNDVSTDPYHPPALAWAAELRSPQDLPINPAPLQVFEKNPGPLYTRASPVEVITEASELMEELGWQQRPSPTGIDAVVT SRWFGFQDDVALRVFAGPKETRVDMRSASRQGRSDLGANRARIHAFLDLLNERLGGAYKPKMKKIEEDQYAR >Mature_231_residues PSYLWWPLLAWMLPLAGALGSRMHLWPWWAGFALCLVSALIALGLLLHLPWSRHKVPSLWGIVPLLLPLLFVVQALRMPL TNDVSTDPYHPPALAWAAELRSPQDLPINPAPLQVFEKNPGPLYTRASPVEVITEASELMEELGWQQRPSPTGIDAVVTS RWFGFQDDVALRVFAGPKETRVDMRSASRQGRSDLGANRARIHAFLDLLNERLGGAYKPKMKKIEEDQYAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26102; Mature: 25971
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYLWWPLLAWMLPLAGALGSRMHLWPWWAGFALCLVSALIALGLLLHLPWSRHKVPSL CCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH WGIVPLLLPLLFVVQALRMPLTNDVSTDPYHPPALAWAAELRSPQDLPINPAPLQVFEKN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHEEECC PGPLYTRASPVEVITEASELMEELGWQQRPSPTGIDAVVTSRWFGFQDDVALRVFAGPKE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHH TRVDMRSASRQGRSDLGANRARIHAFLDLLNERLGGAYKPKMKKIEEDQYAR HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCC >Mature Secondary Structure PSYLWWPLLAWMLPLAGALGSRMHLWPWWAGFALCLVSALIALGLLLHLPWSRHKVPSL CCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH WGIVPLLLPLLFVVQALRMPLTNDVSTDPYHPPALAWAAELRSPQDLPINPAPLQVFEKN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHEEECC PGPLYTRASPVEVITEASELMEELGWQQRPSPTGIDAVVTSRWFGFQDDVALRVFAGPKE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHH TRVDMRSASRQGRSDLGANRARIHAFLDLLNERLGGAYKPKMKKIEEDQYAR HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA