| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299652
Identifier: 145299652
GI number: 145299652
Start: 2923113
End: 2923580
Strand: Direct
Name: 145299652
Synonym: ASA_2726
Alternate gene names: NA
Gene position: 2923113-2923580 (Clockwise)
Preceding gene: 145299651
Following gene: 145299654
Centisome position: 62.16
GC content: 64.74
Gene sequence:
>468_bases ATGACAGATCCCATCCGTTTCGAAACCGGCCGCCCCATGCTGTTTGGCGGCCTGCGCCGCCACCATGCCTTCGCGCACGC CGACTTCGGTGGCCAATGGCGTGACTTCAGCGCTCTGGGCCCACTACCGGGCCAGCTGGGGGAGCATGCCTATGGCGTCA TCTGCGGCGTGACTGCCACAGAATGCGAATATATGTGCGCGGTGGAAGTCGCCGCGCTGGAGGTACTGCCCAAGACGCTG GGGCGGATGCGCATCCAGCCCCAGACCTATGCCGTCTTCCTGCATCAGGGTCATGTCTCGACCATGCCACACACCTGGCA GCAGGCGCTGGACTGGCTGGCGCAATCGGATTACCAGTCTGCCTACCAGCCCGATTTCGAGCGCTATGGCGCCGAATATG CCCCCCACACCGGCAGCGGCGAAGTGGAACTCTGGCTCGCCGTTGTGCCGCGCCAGGCCATGGCCTGA
Upstream 100 bases:
>100_bases GCGCTGGCCATCGTGTCCGAGGACTATCAACGCAAGCTCAAGGAAGGCAAGGATCACTGAGGGCGGCAGCGCTGCCGCCT CACCCCGCACAGGAGGCAAG
Downstream 100 bases:
>100_bases GGCGGCCCTCTCAACAGCGCGCCAGACCCATTCAGGCAGGCCCCATCACCTGGTCACACAGGGCGATCAGGGCCTCGCTG AGGCGGGCCAGGGGTTCGCC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AraC Family; Transcriptional Regulatory Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTDPIRFETGRPMLFGGLRRHHAFAHADFGGQWRDFSALGPLPGQLGEHAYGVICGVTATECEYMCAVEVAALEVLPKTL GRMRIQPQTYAVFLHQGHVSTMPHTWQQALDWLAQSDYQSAYQPDFERYGAEYAPHTGSGEVELWLAVVPRQAMA
Sequences:
>Translated_155_residues MTDPIRFETGRPMLFGGLRRHHAFAHADFGGQWRDFSALGPLPGQLGEHAYGVICGVTATECEYMCAVEVAALEVLPKTL GRMRIQPQTYAVFLHQGHVSTMPHTWQQALDWLAQSDYQSAYQPDFERYGAEYAPHTGSGEVELWLAVVPRQAMA >Mature_154_residues TDPIRFETGRPMLFGGLRRHHAFAHADFGGQWRDFSALGPLPGQLGEHAYGVICGVTATECEYMCAVEVAALEVLPKTLG RMRIQPQTYAVFLHQGHVSTMPHTWQQALDWLAQSDYQSAYQPDFERYGAEYAPHTGSGEVELWLAVVPRQAMA
Specific function: Unknown
COG id: COG3708
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17308; Mature: 17177
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPIRFETGRPMLFGGLRRHHAFAHADFGGQWRDFSALGPLPGQLGEHAYGVICGVTAT CCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH ECEYMCAVEVAALEVLPKTLGRMRIQPQTYAVFLHQGHVSTMPHTWQQALDWLAQSDYQS CCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH AYQPDFERYGAEYAPHTGSGEVELWLAVVPRQAMA HCCCCHHHCCCCCCCCCCCCCEEEEEEECCHHHCC >Mature Secondary Structure TDPIRFETGRPMLFGGLRRHHAFAHADFGGQWRDFSALGPLPGQLGEHAYGVICGVTAT CCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH ECEYMCAVEVAALEVLPKTLGRMRIQPQTYAVFLHQGHVSTMPHTWQQALDWLAQSDYQS CCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH AYQPDFERYGAEYAPHTGSGEVELWLAVVPRQAMA HCCCCHHHCCCCCCCCCCCCCEEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA