| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is glpK [H]
Identifier: 145299636
GI number: 145299636
Start: 2908853
End: 2910355
Strand: Direct
Name: glpK [H]
Synonym: ASA_2710
Alternate gene names: 145299636
Gene position: 2908853-2910355 (Clockwise)
Preceding gene: 145299635
Following gene: 145299638
Centisome position: 61.86
GC content: 61.01
Gene sequence:
>1503_bases ATGTCTGCTGAAAAAAAATATGTCGTCGCTCTGGACCAGGGTACTACCTCTTCCCGCGCCATCGTGTTTGACCAGGATGC CAATATCGTCGGCACCTCCCAGCGCGAATTCACCCAGCACTACCCGAAAGCGGGCTGGGTAGAGCACGACCCCATGGAGA TCTGGGCGACCCAGTCCTCCGTCTTCACCGAAGTACTGGCCAAGACTGGCCTGCGCAGCGAAGAGATTGCCGCCATCGGC ATCACCAACCAGCGTGAAACCACAGTGGTATGGGAAAAGGCCACCGGCAAACCCATCTACAACGCCATTGTCTGGCAGTG CCGCCGCACCGCAGCCATCTGCGAAGAGCTCAAGGCCCGTGGCCTGGAAGAGTATGTGCGCGAGAACACCGGTCTGGTGC TGGATGCCTACTTCTCCGGCACCAAGGTGAAGTGGATCCTCGACAACGTCGAAGGGGCCCGCGAGAAGGCGATGAACGGC GAACTGCTGTTCGGCACCATAGACACCTGGCTGGTGTGGAAGATGACCAATGGCGAAGTGCACGTCACTGACCCGACCAA CGCTTCCCGTACCATGCTCTACAACATCCGCGACCTGAAGTGGGACGAGAAGATGCTGGACGAGCTGGGCATTCCCTTGT CCATGCTGCCAGAGGTCAAACCCTCTTCCGAAGTGTATGGCTACACCACCCGTGGCGGCGGCTCCCGCATCCCCATCGCC GGCATTGCCGGTGACCAGCAGTCTGCCCTTTTCGGCCAGCTCTGCTTCGAAAAAGGGATGGCCAAGAACACCTACGGTAC CGGCTGCTTCTTGCTGATGAACACGGGCACAGAGCCGGTTCGCTCCAGCAACGGCCTGCTGACCACGGTCGCCATCGGCC CGAAAGGGGAAGTGAACTACGCGCTGGAAGGGGCTGTCTTTATGGGCGGCGCTACCGTGCAGTGGCTGCGTGACGAGCTG AAACTCATCCACGATGCCCGCGATACCGACTACTTCGCCTCCAAGGTGGGTGACACCAACGGCGTCTATCTGGTGCCGGC CTTCGTCGGCCTGGGCGCACCCTACTGGGATCCCTATGCTCGCGGCACCATGGTCGGCCTGACCCGTGGCGCCAACCGCA ACCACATCATTCGTGCCGCGCTGGAATCCATCGCCTACCAGAGCCGTGATGTGCTGGATGCCATGCAGCAGGACTCCGGC ATCAAGCTGGCCGCCCTCAAGGTAGACGGCGGCGCGGTTGCCAACGACTTCCTGATGCAGTTCCAGTCCGACATGATGCA CACCCCTGTGGTGCGTCCGACCCGTATCGAGACCACCGCCATGGGCGCCGCCTTCCTGGCCGGTCTGGCCGTCGGCTTCT GGAAGAGCTCTGACGAGCTGGAAGACAAGTTCAGCGTGGATCGTGAATTCATCCCGCAGATGAGCCACGAAGAGCGCAAC AAGCTCTACCACGGCTGGCAGAAAGCGGTTGAGCGTTCACGCCGCTGGGCCGAAGAGGATTAA
Upstream 100 bases:
>100_bases CACCGAGCAAGCTGCCCAAACCGCCAAAGAAGAGGCCGCAGCATAAGAGCGGCCCTCCCCAACGTGTAACAACGTGGAAA ATAAAAACGTGGAGAACATC
Downstream 100 bases:
>100_bases TCGGGCAACCGACATCTTTCCGAGATGAACAAACAAAGAGGCCGACAGCGATGTCGGCCTCTTCTTTGAGCTCTTTATCC ACTCCGGCCATTGGCAACGT
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MSAEKKYVVALDQGTTSSRAIVFDQDANIVGTSQREFTQHYPKAGWVEHDPMEIWATQSSVFTEVLAKTGLRSEEIAAIG ITNQRETTVVWEKATGKPIYNAIVWQCRRTAAICEELKARGLEEYVRENTGLVLDAYFSGTKVKWILDNVEGAREKAMNG ELLFGTIDTWLVWKMTNGEVHVTDPTNASRTMLYNIRDLKWDEKMLDELGIPLSMLPEVKPSSEVYGYTTRGGGSRIPIA GIAGDQQSALFGQLCFEKGMAKNTYGTGCFLLMNTGTEPVRSSNGLLTTVAIGPKGEVNYALEGAVFMGGATVQWLRDEL KLIHDARDTDYFASKVGDTNGVYLVPAFVGLGAPYWDPYARGTMVGLTRGANRNHIIRAALESIAYQSRDVLDAMQQDSG IKLAALKVDGGAVANDFLMQFQSDMMHTPVVRPTRIETTAMGAAFLAGLAVGFWKSSDELEDKFSVDREFIPQMSHEERN KLYHGWQKAVERSRRWAEED
Sequences:
>Translated_500_residues MSAEKKYVVALDQGTTSSRAIVFDQDANIVGTSQREFTQHYPKAGWVEHDPMEIWATQSSVFTEVLAKTGLRSEEIAAIG ITNQRETTVVWEKATGKPIYNAIVWQCRRTAAICEELKARGLEEYVRENTGLVLDAYFSGTKVKWILDNVEGAREKAMNG ELLFGTIDTWLVWKMTNGEVHVTDPTNASRTMLYNIRDLKWDEKMLDELGIPLSMLPEVKPSSEVYGYTTRGGGSRIPIA GIAGDQQSALFGQLCFEKGMAKNTYGTGCFLLMNTGTEPVRSSNGLLTTVAIGPKGEVNYALEGAVFMGGATVQWLRDEL KLIHDARDTDYFASKVGDTNGVYLVPAFVGLGAPYWDPYARGTMVGLTRGANRNHIIRAALESIAYQSRDVLDAMQQDSG IKLAALKVDGGAVANDFLMQFQSDMMHTPVVRPTRIETTAMGAAFLAGLAVGFWKSSDELEDKFSVDREFIPQMSHEERN KLYHGWQKAVERSRRWAEED >Mature_499_residues SAEKKYVVALDQGTTSSRAIVFDQDANIVGTSQREFTQHYPKAGWVEHDPMEIWATQSSVFTEVLAKTGLRSEEIAAIGI TNQRETTVVWEKATGKPIYNAIVWQCRRTAAICEELKARGLEEYVRENTGLVLDAYFSGTKVKWILDNVEGAREKAMNGE LLFGTIDTWLVWKMTNGEVHVTDPTNASRTMLYNIRDLKWDEKMLDELGIPLSMLPEVKPSSEVYGYTTRGGGSRIPIAG IAGDQQSALFGQLCFEKGMAKNTYGTGCFLLMNTGTEPVRSSNGLLTTVAIGPKGEVNYALEGAVFMGGATVQWLRDELK LIHDARDTDYFASKVGDTNGVYLVPAFVGLGAPYWDPYARGTMVGLTRGANRNHIIRAALESIAYQSRDVLDAMQQDSGI KLAALKVDGGAVANDFLMQFQSDMMHTPVVRPTRIETTAMGAAFLAGLAVGFWKSSDELEDKFSVDREFIPQMSHEERNK LYHGWQKAVERSRRWAEED
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=514, Percent_Identity=48.2490272373541, Blast_Score=463, Evalue=1e-130, Organism=Homo sapiens, GI4504007, Length=513, Percent_Identity=48.3430799220273, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI42794763, Length=519, Percent_Identity=47.7842003853565, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI41393575, Length=506, Percent_Identity=46.6403162055336, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI88196792, Length=508, Percent_Identity=34.251968503937, Blast_Score=311, Evalue=9e-85, Organism=Escherichia coli, GI1790361, Length=499, Percent_Identity=73.1462925851703, Blast_Score=770, Evalue=0.0, Organism=Escherichia coli, GI1789138, Length=487, Percent_Identity=22.7926078028747, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787789, Length=523, Percent_Identity=25.8126195028681, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1790005, Length=511, Percent_Identity=23.4833659491194, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789987, Length=502, Percent_Identity=22.9083665338645, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535599, Length=502, Percent_Identity=42.4302788844622, Blast_Score=408, Evalue=1e-114, Organism=Caenorhabditis elegans, GI71986140, Length=521, Percent_Identity=25.5278310940499, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71986147, Length=265, Percent_Identity=31.6981132075472, Blast_Score=128, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6321755, Length=558, Percent_Identity=36.0215053763441, Blast_Score=303, Evalue=6e-83, Organism=Drosophila melanogaster, GI17864214, Length=508, Percent_Identity=45.6692913385827, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI24655555, Length=501, Percent_Identity=40.9181636726547, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24655560, Length=501, Percent_Identity=40.9181636726547, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24655570, Length=501, Percent_Identity=40.9181636726547, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24655574, Length=501, Percent_Identity=40.9181636726547, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24655565, Length=501, Percent_Identity=40.9181636726547, Blast_Score=400, Evalue=1e-112, Organism=Drosophila melanogaster, GI24654573, Length=445, Percent_Identity=46.7415730337079, Blast_Score=382, Evalue=1e-106, Organism=Drosophila melanogaster, GI19922058, Length=524, Percent_Identity=32.6335877862595, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24652871, Length=491, Percent_Identity=33.4012219959267, Blast_Score=273, Evalue=3e-73, Organism=Drosophila melanogaster, GI24656367, Length=516, Percent_Identity=29.0697674418605, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI21357867, Length=533, Percent_Identity=28.5178236397749, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24656372, Length=368, Percent_Identity=30.7065217391304, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI45552909, Length=296, Percent_Identity=28.3783783783784, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 55493; Mature: 55362
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEKKYVVALDQGTTSSRAIVFDQDANIVGTSQREFTQHYPKAGWVEHDPMEIWATQSS CCCCCEEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHHCCCCCCCCCCCCEEEECHHH VFTEVLAKTGLRSEEIAAIGITNQRETTVVWEKATGKPIYNAIVWQCRRTAAICEELKAR HHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC GLEEYVRENTGLVLDAYFSGTKVKWILDNVEGAREKAMNGELLFGTIDTWLVWKMTNGEV CHHHHHHCCCCEEEEEEECCCEEEEEEECCCHHHHHCCCCCEEEEEECEEEEEEEECCEE HVTDPTNASRTMLYNIRDLKWDEKMLDELGIPLSMLPEVKPSSEVYGYTTRGGGSRIPIA EEECCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCEEE GIAGDQQSALFGQLCFEKGMAKNTYGTGCFLLMNTGTEPVRSSNGLLTTVAIGPKGEVNY EECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEE ALEGAVFMGGATVQWLRDELKLIHDARDTDYFASKVGDTNGVYLVPAFVGLGAPYWDPYA EEECEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCHH RGTMVGLTRGANRNHIIRAALESIAYQSRDVLDAMQQDSGIKLAALKVDGGAVANDFLMQ CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH FQSDMMHTPVVRPTRIETTAMGAAFLAGLAVGFWKSSDELEDKFSVDREFIPQMSHEERN HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCHHHHH KLYHGWQKAVERSRRWAEED HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SAEKKYVVALDQGTTSSRAIVFDQDANIVGTSQREFTQHYPKAGWVEHDPMEIWATQSS CCCCEEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHHCCCCCCCCCCCCEEEECHHH VFTEVLAKTGLRSEEIAAIGITNQRETTVVWEKATGKPIYNAIVWQCRRTAAICEELKAR HHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC GLEEYVRENTGLVLDAYFSGTKVKWILDNVEGAREKAMNGELLFGTIDTWLVWKMTNGEV CHHHHHHCCCCEEEEEEECCCEEEEEEECCCHHHHHCCCCCEEEEEECEEEEEEEECCEE HVTDPTNASRTMLYNIRDLKWDEKMLDELGIPLSMLPEVKPSSEVYGYTTRGGGSRIPIA EEECCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCEEE GIAGDQQSALFGQLCFEKGMAKNTYGTGCFLLMNTGTEPVRSSNGLLTTVAIGPKGEVNY EECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEE ALEGAVFMGGATVQWLRDELKLIHDARDTDYFASKVGDTNGVYLVPAFVGLGAPYWDPYA EEECEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCHH RGTMVGLTRGANRNHIIRAALESIAYQSRDVLDAMQQDSGIKLAALKVDGGAVANDFLMQ CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH FQSDMMHTPVVRPTRIETTAMGAAFLAGLAVGFWKSSDELEDKFSVDREFIPQMSHEERN HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCHHHHH KLYHGWQKAVERSRRWAEED HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA